Gene: AT2G44350
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G44350
- Transcript Identifier AT2G44350.2
- Gene Type Coding gene
- Location Chr2 : 18316673-18320524 : positive
Gene Family Information
- ID HOM05D002030
- #Genes/#Species 326/99
- Phylogenetic origin
- ID ORTHO05D004391
- #Genes/#Species 182/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G44350.2
- symbol ATCS
- uniprot P20115
Descriptions
- Description Citrate synthase family protein
- Computational description ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like (InterPro:IPR002020), Citrate synthase-like, core (InterPro:IPR016141); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10534 Blast hits to 10528 proteins in 2768 species: Archae - 158; Bacteria - 6911; Metazoa - 258; Fungi - 320; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink).
- Computational description ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006101 | IEA | Gene Ontology | citrate metabolic process | |
| GO:0006101 | IEA | InterPro | citrate metabolic process | |
| GO:0046686 | IEP | GOA Database | response to cadmium ion | |
| GO:0005975 | IBA | Gene Ontology | carbohydrate metabolic process | 1 |
| GO:0006099 | IBA TAS, IEA | Gene Ontology | tricarboxylic acid cycle | 1 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004108 | IEA | GOA Database | citrate (Si)-synthase activity | |
| GO:0004108 | IDA IBA | Gene Ontology | citrate (Si)-synthase activity | 1 3 |
| GO:0004108 | IEA | InterPro | citrate (Si)-synthase activity | |
| GO:0046912 | IEA | GOA Database | acyltransferase, acyl groups converted into alkyl on transfer | |
| GO:0046912 | IEA | InterPro | acyltransferase, acyl groups converted into alkyl on transfer | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0005524 | IDA | GOA Database | ATP binding | |
| GO:0005524 | HDA | Gene Ontology | ATP binding | 4 |
| GO:0008270 | IDA | GOA Database | zinc ion binding | |
| GO:0008270 | HDA | Gene Ontology | zinc ion binding | 5 |
| GO:0036440 | IEA | GOA Database | citrate synthase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005759 | IEA | GOA Database | mitochondrial matrix | |
| GO:0005759 | IBA | Gene Ontology | mitochondrial matrix | 1 |
| GO:0005739 | IDA IEA | GOA Database | mitochondrion | |
| GO:0005739 | HDA ISM TAS | Gene Ontology | mitochondrion | 2 6 |
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009507 | HDA | Gene Ontology | chloroplast | 7 |
| GO:0005618 | IDA | GOA Database | cell wall | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 8 |
| GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 9 |
| GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 10 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 2.3.1 | Cellular respiration.tricarboxylic acid cycle.citrate synthase |