Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06380 Brassica napus
A06p14000 Brassica napus
A07p39350 Brassica napus
A10p24390 Brassica napus
Aa31LG11G15370 Aethionema arabicum
Aa31LG4G3660 Aethionema arabicum
Aa31LG7G2720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2461 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2462 Anthoceros agrestis
Actinidia02657 Actinidia chinensis
Actinidia05868 Actinidia chinensis
Actinidia34677 Actinidia chinensis
Ah.11g045350 Amaranthus hybridus
AL1G30290 Arabidopsis lyrata
AL2G33180 Arabidopsis lyrata
AL6G24680 Arabidopsis lyrata
Aqoxy3G04327 Aquilegia oxysepala
Aqoxy5G03213 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IEW9E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.107ZNT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1B5LVB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6ZB81I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8I8ZWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8L4QR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGG1CT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IA1NT7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR4UTH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3XDKU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDLI1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VW78JA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1U3RA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9SC1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WQ7LLZ Arachis hypogaea
AT1G17940 Arabidopsis thaliana
AT1G73390 Arabidopsis thaliana
AT5G14020 Arabidopsis thaliana
ATR0124G046 Amborella trichopoda
ATR0582G333 Amborella trichopoda
Atru.chr11.50 Acer truncatum
Atru.chr11.53 Acer truncatum
Atru.chr6.2628 Acer truncatum
Atru.chr9.18 Acer truncatum
AUR62019723 Chenopodium quinoa
AUR62035468 Chenopodium quinoa
AUR62035469 Chenopodium quinoa
AUR62037850 Chenopodium quinoa
AUR62041090 Chenopodium quinoa
BcaB01g05314 Brassica carinata
BcaB03g15056 Brassica carinata
BcaB07g34017 Brassica carinata
BcaB07g34018 Brassica carinata
BcaC03g17499 Brassica carinata
BcaC05g25697 Brassica carinata
BcaC08g46762 Brassica carinata
BolC3t13236H Brassica oleracea
BolC5t30332H Brassica oleracea
BolC6t39796H Brassica oleracea
BolC9t59146H Brassica oleracea
BolC9t59147H Brassica oleracea
BraA03t09967Z Brassica rapa
BraA06t24538Z Brassica rapa
BraA07t31484Z Brassica rapa
BraA10t44505Z Brassica rapa
C03p07340 Brassica napus
C05p16320 Brassica napus
C06p47580 Brassica napus
C09p63100 Brassica napus
CAN.G473.81 Capsicum annuum
CAN.G861.32 Capsicum annuum
CANSAT80G0367 Cannabis sativa
CARHR018560 Cardamine hirsuta
CARHR066440 Cardamine hirsuta
CARHR066450 Cardamine hirsuta
CARHR199360 Cardamine hirsuta
Carub.0001s1764 Capsella rubella
Carub.0002s2013 Capsella rubella
Carub.0006s1221 Capsella rubella
Ca_08106_v3 Cicer arietinum L.
Ca_09929_v3 Cicer arietinum L.
Ca_09933_v3 Cicer arietinum L.
Ca_25376_v3 Cicer arietinum L.
Cc02_g29280 Coffea canephora
CDE07G1305 Ceratophyllum demersum
CDE07G1519 Ceratophyllum demersum
Cfa007184 Carpinus fangiana
Cfa017804 Carpinus fangiana
Ciclev10015370m.g Citrus clementina
Ciclev10015430m.g Citrus clementina
Ciclev10021034m.g Citrus clementina
CiPaw.03G003700 Carya illinoinensis
CiPaw.15G107400 Carya illinoinensis
ClCG01G014730 Citrullus lanatus
ClCG05G013760 Citrullus lanatus
COL.COLO4_13330 Corchorus olitorius
COL.COLO4_22327 Corchorus olitorius
COL.COLO4_22328 Corchorus olitorius
COL.COLO4_24077 Corchorus olitorius
COL.COLO4_33136 Corchorus olitorius
Cpa.g.sc168.4 Carica papaya
Cpa.g.sc168.6 Carica papaya
Cpa.g.sc257.5 Carica papaya
Cpa.g.sc70.93 Carica papaya
CsaV3_1G007600 Cucumis sativus L.
CsaV3_3G026360 Cucumis sativus L.
CSS0010361 Camellia sinensis var. sinensis
CSS0032729 Camellia sinensis var. sinensis
CSS0034595 Camellia sinensis var. sinensis
DCAR_000945 Daucus carota
DCAR_011407 Daucus carota
DCAR_014480 Daucus carota
DCAR_014753 Daucus carota
Dinv03500 Davidia involucrata
Dinv03505 Davidia involucrata
Dinv11734 Davidia involucrata
Dinv25626 Davidia involucrata
Duzib084G0350 Durio zibethinus
Duzib132G1176 Durio zibethinus
Duzib147G0925 Durio zibethinus
ECA238G2366 Erigeron canadensis
ECA246G2407 Erigeron canadensis
EL10Ac2g03311 Beta vulgaris
EL10Ac6g13376 Beta vulgaris
Eucgr.H00656 Eucalyptus grandis
Eucgr.H03368 Eucalyptus grandis
Eucgr.K02328 Eucalyptus grandis
FAN02G0478 Fragaria x ananassa
FAN02G4394 Fragaria x ananassa
FAN04G1098 Fragaria x ananassa
FAN05G4316 Fragaria x ananassa
FAN08G0392 Fragaria x ananassa
FAN13G1325 Fragaria x ananassa
FAN14G3452 Fragaria x ananassa
FAN18G1139 Fragaria x ananassa
FvH4_5g18540 Fragaria vesca
FvH4_6g54080 Fragaria vesca
Glyma.09G161900 Glycine max
Glyma.10G173800 Glycine max
Glyma.16G051000 Glycine max
Glyma.16G211100 Glycine max
Glyma.19G099600 Glycine max
Glyma.20G216500 Glycine max
Gohir.A03G090500 Gossypium hirsutum
Gohir.A03G167700 Gossypium hirsutum
Gohir.A07G231000 Gossypium hirsutum
Gohir.A12G272400 Gossypium hirsutum
Gohir.D02G118500 Gossypium hirsutum
Gohir.D02G190800 Gossypium hirsutum
Gohir.D07G238200 Gossypium hirsutum
Gohir.D12G273100 Gossypium hirsutum
Gorai.001G274000 Gossypium raimondii
Gorai.005G135300 Gossypium raimondii
Gorai.005G213600 Gossypium raimondii
Gorai.008G293500 Gossypium raimondii
GSVIVG01024250001 Vitis vinifera
GSVIVG01033018001 Vitis vinifera
GSVIVG01034360001 Vitis vinifera
HanXRQChr03g0093091 Helianthus annuus
HanXRQChr06g0183511 Helianthus annuus
HanXRQChr08g0221511 Helianthus annuus
HanXRQChr13g0397011 Helianthus annuus
HanXRQChr15g0475801 Helianthus annuus
HanXRQChr16g0528601 Helianthus annuus
HanXRQChr17g0551571 Helianthus annuus
Haze_14925 Corylus avellana
Haze_18409 Corylus avellana
Hma1.2p1_0248F.1_g102040 Hydrangea macrophylla
Hma1.2p1_0816F.1_g222960 Hydrangea macrophylla
HPP92_014762 Vanilla planifolia
HPP92_015005 Vanilla planifolia
Hund12857 Selenicereus undatus
Hund12858 Selenicereus undatus
Hund13063 Selenicereus undatus
Hund29415 Selenicereus undatus
Hund29416 Selenicereus undatus
Lalb_Chr06g0168661 Lupinus albus
Lalb_Chr14g0363831 Lupinus albus
Lalb_Chr14g0370151 Lupinus albus
Lalb_Chr21g0311681 Lupinus albus
Lj1g0022123 Lotus japonicus
Lj2g0017850 Lotus japonicus
Lj5A168T93 Lonicera japonica
Lj5g0026773 Lotus japonicus
Lj7C614T14 Lonicera japonica
Lj9A411G75 Lonicera japonica
Lsat_1_v5_gn_0_11320 Lactuca sativa
Lsat_1_v5_gn_2_19660 Lactuca sativa
Manes.02G220600 Manihot esculenta
Manes.04G090920 Manihot esculenta
Manes.04G091001 Manihot esculenta
Manes.04G161500 Manihot esculenta
Manes.11G079200 Manihot esculenta
MBI03_g13445_MAGBIO Magnolia biondii
MBI06_g12549_MAGBIO Magnolia biondii
MD06G1240300 Malus domestica
MD09G1005600 Malus domestica
MD09G1124500 Malus domestica
MD10G1018100 Malus domestica
MD14G1246500 Malus domestica
MD17G1009700 Malus domestica
Medtr1g077580 Medicago truncatula
Medtr6g077430 Medicago truncatula
Medtr6g077490 Medicago truncatula
Medtr7g083110 Medicago truncatula
MELO3C002179.2 Cucumis melo
MELO3C014936.2 Cucumis melo
Migut.F00024 Erythranthe guttata
Migut.O00277 Erythranthe guttata
MSTRG.11563 Avicennia marina
MSTRG.3053 Avicennia marina
MSTRG.9716 Avicennia marina
Nitab4.5_0000162g0010 Nicotiana tabacum
Nitab4.5_0001495g0060 Nicotiana tabacum
Nitab4.5_0003318g0170 Nicotiana tabacum
Nitab4.5_0007717g0070 Nicotiana tabacum
Nn3g16335 Nelumbo nucifera
Nn3g18551 Nelumbo nucifera
Nn4g25177 Nelumbo nucifera
Oeu020408.1 Olea europaea
Oeu057514.3 Olea europaea
Oeu062063.1 Olea europaea
Os02g0828100 Oryza sativa ssp. japonica
Os04g0527400 Oryza sativa ssp. japonica
Os11g0514800 Oryza sativa ssp. japonica
Peaxi162Scf00171g00132 Petunia axillaris
Peaxi162Scf00420g00735 Petunia axillaris
Peaxi162Scf01026g00019 Petunia axillaris
PGR044G0536 Punica granatum
PGR083G0518 Punica granatum
PGR083G1912 Punica granatum
PGSC0003DMG400015281 Solanum tuberosum
PGSC0003DMG400018727 Solanum tuberosum
PGSC0003DMG400020218 Solanum tuberosum
Phvul.001G087500 Phaseolus vulgaris
Phvul.004G137200 Phaseolus vulgaris
Phvul.L006201 Phaseolus vulgaris
Potri.001G323600 Populus trichocarpa
Potri.004G067400 Populus trichocarpa
Potri.017G062000 Populus trichocarpa
Potri.017G154200 Populus trichocarpa
Pp3c10_2740 Physcomitrium patens
Pp3c14_9570 Physcomitrium patens
Pp3c16_12200 Physcomitrium patens
Pp3c2_19570 Physcomitrium patens
Pp3c5_5280 Physcomitrium patens
Pp3c6_25010 Physcomitrium patens
Prupe.3G311400 Prunus persica
Prupe.5G244800 Prunus persica
Psat3g096040 Pisum sativum
Psat3g187560 Pisum sativum
Psat6g054560 Pisum sativum
PSO017G2277 Papaver somniferum
PSO017G2498 Papaver somniferum
PSO063G3302 Papaver somniferum
PSO170G5286 Papaver somniferum
PSO478G0040 Papaver somniferum
PSO782G1958 Papaver somniferum
QL01p000420 Quercus lobata
QL01p011503 Quercus lobata
QL02p070193 Quercus lobata
QL10p033816 Quercus lobata
QL10p033825 Quercus lobata
RcHm_v2.0_Chr2g0176271 Rosa chinensis
RcHm_v2.0_Chr7g0176971 Rosa chinensis
Rhsim08G0125200 Rhododendron simsii
Rhsim10G0002600 Rhododendron simsii
Sabra04G0045200 Salix brachista
Sabra16G0206300 Salix brachista
Sabra17G0056100 Salix brachista
Sabra17G0126300 Salix brachista
SalBow2G0107 Salvia bowleyana
SalBow2G1895 Salvia bowleyana
SalBow2G2867 Salvia bowleyana
SalBow3G2746 Salvia bowleyana
SalBow4G1097 Salvia bowleyana
SalBow4G2816 Salvia bowleyana
SalBow5G3524 Salvia bowleyana
SalBow5G4966 Salvia bowleyana
SalBow6G3115 Salvia bowleyana
SalBow8G0316 Salvia bowleyana
SalBow8G2722 Salvia bowleyana
Sc10g0006310 Simmondsia chinensis
Sc10g0006380 Simmondsia chinensis
Sed0006320 Sechium edule
Sed0011987 Sechium edule
Sed0016481 Sechium edule
SEGI_23745 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45159 Striga asiatica
SGA_v2.0_scaffold25G10732 Striga asiatica
SHI21153 Sapria himalayana
SMO334G0092 Selaginella moellendorffii
SMO356G0058 Selaginella moellendorffii
Solyc02g093960.3 Solanum lycopersicum
Solyc03g019950.3 Solanum lycopersicum
Sopen02g038610 Solanum pennellii
Sopen03g029670 Solanum pennellii
Sp1g16010 Schrenkiella parvula
Sp5g28320 Schrenkiella parvula
Sp6g29980 Schrenkiella parvula
TAR371G0948 Trochodendron aralioides
TAR622G0095 Trochodendron aralioides
TAR629G0755 Trochodendron aralioides
TAR629G2546 Trochodendron aralioides
THA.LOC104802368 Tarenaya hassleriana
THA.LOC104813932 Tarenaya hassleriana
Thecc.02G152700 Theobroma cacao
Thecc.03G069500 Theobroma cacao
Thecc.04G043700 Theobroma cacao
Thhalv10007785m.g Eutrema salsugineum
Thhalv10013631m.g Eutrema salsugineum
Thhalv10018609m.g Eutrema salsugineum
TPR.G18958 Trifolium pratense
TPR.G24687 Trifolium pratense
TPR.G28464 Trifolium pratense
TPR.G484 Trifolium pratense
TPR.G8867 Trifolium pratense
TWI15G0478 Tripterygium wilfordii
TWI34G0708 Tripterygium wilfordii
TWI60G0804 Tripterygium wilfordii
TWI74G1485 Tripterygium wilfordii
TWI81G0016 Tripterygium wilfordii
unitig_22.g5319 Utricularia gibba
vmacro17749 Vaccinium macrocarpon
vmacro17750 Vaccinium macrocarpon
vmacro22235 Vaccinium macrocarpon
vmacro23369 Vaccinium macrocarpon
VMungo0464G0827 Vigna mungo
VMungo0720G1801 Vigna mungo
VMungo1383G0379 Vigna mungo
Zm00001eb076730 Zea mays
Zm00001eb113060 Zea mays
Zm00001eb170190 Zea mays
Zm00001eb427060 Zea mays

User provided reference genes

Program Settings