Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03740 Brassica napus
A03p46310 Brassica napus
A05p30460 Brassica napus
A10p28380 Brassica napus
Aa31LG11G2700 Aethionema arabicum
Aa31LG3G18270 Aethionema arabicum
Aa31LG8G5970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2462 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.258 Anthoceros agrestis
Actinidia13716 Actinidia chinensis
Actinidia38418 Actinidia chinensis
Ah.11g047950 Amaranthus hybridus
AL3G32550 Arabidopsis lyrata
AL6G18700 Arabidopsis lyrata
AL6G34470 Arabidopsis lyrata
Aqoxy3G04303 Aquilegia oxysepala
Aqoxy3G04305 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60FNUJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQR8UB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8LG8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XQH9IF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YRK7KB Arachis hypogaea
AT3G19180 Arabidopsis thaliana
AT5G08300 Arabidopsis thaliana
AT5G23250 Arabidopsis thaliana
ATR0618G140 Amborella trichopoda
ATR0618G229 Amborella trichopoda
Atru.chr9.92 Acer truncatum
Atru.chr9.93 Acer truncatum
Atru.chr9.94 Acer truncatum
Atru.chr9.96 Acer truncatum
AUR62008507 Chenopodium quinoa
AUR62017711 Chenopodium quinoa
AUR62021583 Chenopodium quinoa
AUR62032970 Chenopodium quinoa
BcaB01g05616 Brassica carinata
BcaB06g25974 Brassica carinata
BcaB08g37266 Brassica carinata
BcaC03g13215 Brassica carinata
BcaNung05098 Brassica carinata
BolC2t06309H Brassica oleracea
BolC3t12954H Brassica oleracea
BolC5t33333H Brassica oleracea
BolC7t44954H Brassica oleracea
BolC9t59610H Brassica oleracea
BraA02t04948Z Brassica rapa
BraA03t09721Z Brassica rapa
BraA03t13755Z Brassica rapa
BraA05t21885Z Brassica rapa
BraA10t44885Z Brassica rapa
C02p03480 Brassica napus
C03p04220 Brassica napus
C05p46060 Brassica napus
C07p44330 Brassica napus
C09p68640 Brassica napus
CAN.G282.53 Capsicum annuum
CAN.G39.9 Capsicum annuum
CAN.G929.22 Capsicum annuum
CANSAT64G0368 Cannabis sativa
CANSAT64G2347 Cannabis sativa
CARHR094580 Cardamine hirsuta
CARHR184660 Cardamine hirsuta
CARHR190290 Cardamine hirsuta
CARHR204830 Cardamine hirsuta
CARHR261280 Cardamine hirsuta
Carub.0003s1900 Capsella rubella
Carub.0006s0718 Capsella rubella
Carub.0006s2102 Capsella rubella
Ca_11833_v3 Cicer arietinum L.
Ca_11834_v3 Cicer arietinum L.
Ca_28958_v3 Cicer arietinum L.
CBR_g3058 Chara braunii
Cc04_g08460 Coffea canephora
Cc11_g03450 Coffea canephora
CDE02G0698 Ceratophyllum demersum
CDE04G2352 Ceratophyllum demersum
CDE04G3537 Ceratophyllum demersum
CDE07G0075 Ceratophyllum demersum
CDE07G0628 Ceratophyllum demersum
Cfa017838 Carpinus fangiana
Cfa021434 Carpinus fangiana
Cfa021435 Carpinus fangiana
Cfa021785 Carpinus fangiana
Cfa024566 Carpinus fangiana
Ciclev10018888m.g Citrus clementina
Ciclev10020931m.g Citrus clementina
Ciclev10032075m.g Citrus clementina
CiPaw.16G072900 Carya illinoinensis
CiPaw.16G073000 Carya illinoinensis
ClCG01G014830 Citrullus lanatus
ClCG08G001990 Citrullus lanatus
COL.COLO4_24905 Corchorus olitorius
COL.COLO4_33052 Corchorus olitorius
Cpa.g.c41191 Carica papaya
Cpa.g.sc0.121 Carica papaya
Cpa.g.sc0.123 Carica papaya
Cpa.g.sc168.18 Carica papaya
Cre03.g193850 Chlamydomonas reinhardtii
CsaV3_1G007500 Cucumis sativus L.
CsaV3_6G002460 Cucumis sativus L.
CSS0020955 Camellia sinensis var. sinensis
CSS0021616 Camellia sinensis var. sinensis
CSS0026731 Camellia sinensis var. sinensis
CSS0047515 Camellia sinensis var. sinensis
DCAR_002589 Daucus carota
DCAR_023244 Daucus carota
DCAR_023463 Daucus carota
DCAR_024576 Daucus carota
DCAR_026892 Daucus carota
Dinv09728 Davidia involucrata
Dinv11727 Davidia involucrata
Dinv17623 Davidia involucrata
Duzib052G0243 Durio zibethinus
Duzib128G1857 Durio zibethinus
Duzib132G0765 Durio zibethinus
Duzib248G1602 Durio zibethinus
Duzib268G1227 Durio zibethinus
ECA232G1526 Erigeron canadensis
ECA246G4989 Erigeron canadensis
EL10Ac5g11111 Beta vulgaris
EL10Ac9g22963 Beta vulgaris
Eucgr.H00643 Eucalyptus grandis
Eucgr.H00644 Eucalyptus grandis
Eucgr.J00864 Eucalyptus grandis
FAN04G2680 Fragaria x ananassa
FAN08G1981 Fragaria x ananassa
FAN13G2347 Fragaria x ananassa
FAN13G2897 Fragaria x ananassa
FAN18G1706 Fragaria x ananassa
FAN18G2377 Fragaria x ananassa
FvH4_5g18390 Fragaria vesca
FvH4_5g18391 Fragaria vesca
Glyma.09G164700 Glycine max
Glyma.09G164900 Glycine max
Glyma.16G213100 Glycine max
Glyma.16G213200 Glycine max
Gohir.A03G165300 Gossypium hirsutum
Gohir.A11G304500 Gossypium hirsutum
Gohir.A13G060800 Gossypium hirsutum
Gohir.D02G188500 Gossypium hirsutum
Gohir.D11G319900 Gossypium hirsutum
Gohir.D13G060900 Gossypium hirsutum
Gorai.005G211200 Gossypium raimondii
Gorai.007G350000 Gossypium raimondii
Gorai.013G069200 Gossypium raimondii
GSVIVG01026227001 Vitis vinifera
GSVIVG01029333001 Vitis vinifera
GSVIVG01029337001 Vitis vinifera
HanXRQChr01g0000231 Helianthus annuus
HanXRQChr06g0170891 Helianthus annuus
HanXRQChr16g0503331 Helianthus annuus
HanXRQChr17g0540971 Helianthus annuus
Haze_18329 Corylus avellana
Haze_18370 Corylus avellana
Haze_27086 Corylus avellana
Haze_27382 Corylus avellana
Haze_27685 Corylus avellana
Hma1.2p1_0493F.1_g164870 Hydrangea macrophylla
Hma1.2p1_0493F.1_g164880 Hydrangea macrophylla
Hma1.2p1_0989F.1_g244810 Hydrangea macrophylla
HPP92_020368 Vanilla planifolia
HPP92_022060 Vanilla planifolia
Hund02599 Selenicereus undatus
Hund08610 Selenicereus undatus
Hund09878 Selenicereus undatus
Hund24379 Selenicereus undatus
Lalb_Chr14g0370231 Lupinus albus
Lalb_Chr14g0370241 Lupinus albus
Lalb_Chr22g0353971 Lupinus albus
Lalb_Chr22g0353981 Lupinus albus
Lalb_Chr24g0398561 Lupinus albus
Lalb_Chr24g0398581 Lupinus albus
Lj1g0018388 Lotus japonicus
Lj2g0016431 Lotus japonicus
Lj2g0027511 Lotus japonicus
Lj3A848T56 Lonicera japonica
Lj3g0023376 Lotus japonicus
Lj9A413T50 Lonicera japonica
Lsat_1_v5_gn_0_10501 Lactuca sativa
Lsat_1_v5_gn_3_106281 Lactuca sativa
Lsat_1_v5_gn_3_30161 Lactuca sativa
Lsat_1_v5_gn_3_36280 Lactuca sativa
Lsat_1_v5_gn_4_147020 Lactuca sativa
Lsat_1_v5_gn_4_163861 Lactuca sativa
Lsat_1_v5_gn_5_28440 Lactuca sativa
Lsat_1_v5_gn_6_100460 Lactuca sativa
Lsat_1_v5_gn_7_111240 Lactuca sativa
Lsat_1_v5_gn_8_56801 Lactuca sativa
Lsat_1_v5_gn_9_32740 Lactuca sativa
Manes.02G218300 Manihot esculenta
Manes.04G053480 Manihot esculenta
Manes.11G102600 Manihot esculenta
Mapoly0111s0054 Marchantia polymorpha
MBI03_g13817_MAGBIO Magnolia biondii
MBI06_g20297_MAGBIO Magnolia biondii
MBI06_g32742_MAGBIO Magnolia biondii
MBI06_g47410_MAGBIO Magnolia biondii
MCO01G301 Micromonas commoda
MD06G1239700 Malus domestica
MD06G1239800 Malus domestica
MD14G1245700 Malus domestica
MD14G1245800 Malus domestica
Medtr6g077820 Medicago truncatula
Medtr6g077830 Medicago truncatula
MELO3C002167.2 Cucumis melo
MELO3C025039.2 Cucumis melo
Migut.F00794 Erythranthe guttata
Migut.N00791 Erythranthe guttata
Migut.O00266 Erythranthe guttata
MSTRG.23211 Avicennia marina
MSTRG.298 Avicennia marina
MSTRG.8248 Avicennia marina
Nitab4.5_0000069g0360 Nicotiana tabacum
Nitab4.5_0000661g0020 Nicotiana tabacum
Nitab4.5_0000782g0080 Nicotiana tabacum
Nitab4.5_0003040g0110 Nicotiana tabacum
Nitab4.5_0004301g0040 Nicotiana tabacum
Nitab4.5_0005012g0020 Nicotiana tabacum
Nn1g09877 Nelumbo nucifera
Nn3g16143 Nelumbo nucifera
Nn4g26692 Nelumbo nucifera
Oeu011121.2 Olea europaea
Oeu030729.1 Olea europaea
Oeu033793.1 Olea europaea
Oeu038398.1 Olea europaea
Oeu059725.1 Olea europaea
Os04g0675800 Oryza sativa ssp. japonica
Os07g0577700 Oryza sativa ssp. japonica
Peaxi162Scf00021g01916 Petunia axillaris
Peaxi162Scf00171g00246 Petunia axillaris
Peaxi162Scf00334g00321 Petunia axillaris
PGR083G0482 Punica granatum
PGR083G2378 Punica granatum
PGSC0003DMG400010151 Solanum tuberosum
PGSC0003DMG400016412 Solanum tuberosum
Phvul.004G139200 Phaseolus vulgaris
Phvul.004G139300 Phaseolus vulgaris
Potri.005G091400 Populus trichocarpa
Potri.012G035900 Populus trichocarpa
Potri.012G036100 Populus trichocarpa
Potri.012G036200 Populus trichocarpa
Potri.015G028101 Populus trichocarpa
Potri.015G028200 Populus trichocarpa
Pp3c10_7710 Physcomitrium patens
Pp3c12_17300 Physcomitrium patens
Pp3c14_8260 Physcomitrium patens
Pp3c17_6900 Physcomitrium patens
Pp3c6_7570 Physcomitrium patens
PRCOL_00000620 Prasinoderma coloniale
Prupe.4G244800 Prunus persica
Prupe.5G243600 Prunus persica
Prupe.5G243700 Prunus persica
Psat1g121920 Pisum sativum
Psat1g121960 Pisum sativum
PSO063G1521 Papaver somniferum
PSO063G1706 Papaver somniferum
PSO170G1716 Papaver somniferum
PSO384G4484 Papaver somniferum
PSO782G2505 Papaver somniferum
PSO782G3517 Papaver somniferum
QL10p034062 Quercus lobata
QL10p034220 Quercus lobata
RcHm_v2.0_Chr7g0177081 Rosa chinensis
RcHm_v2.0_Chr7g0177091 Rosa chinensis
Rhsim07G0183600 Rhododendron simsii
Rhsim08G0124900 Rhododendron simsii
Rhsim09G0070800 Rhododendron simsii
Sabra05G0075300 Salix brachista
Sabra12G0024600 Salix brachista
Sabra12G0024700 Salix brachista
Sabra15G0023200 Salix brachista
Sabra18G0060500 Salix brachista
SalBow5G3030 Salvia bowleyana
SalBow6G6657 Salvia bowleyana
Sc04g0004520 Simmondsia chinensis
Sc04g0004530 Simmondsia chinensis
Sc04g0004660 Simmondsia chinensis
Sc06g0006770 Simmondsia chinensis
Sed0001556 Sechium edule
Sed0006637 Sechium edule
Sed0019851 Sechium edule
SEGI_03896 Sequoiadendron giganteum
SEGI_09403 Sequoiadendron giganteum
SEGI_16116 Sequoiadendron giganteum
SEGI_18150 Sequoiadendron giganteum
SEGI_33695 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42671 Striga asiatica
SGA_v2.0_scaffold2G01008 Striga asiatica
SGA_v2.0_scaffold90G27748 Striga asiatica
SHI18489 Sapria himalayana
SMO356G0267 Selaginella moellendorffii
Solyc01g007910.3 Solanum lycopersicum
Solyc02g005350.3 Solanum lycopersicum
Solyc03g098610.3 Solanum lycopersicum
Sopen01g003450 Solanum pennellii
Sopen02g001820 Solanum pennellii
Sopen03g029320 Solanum pennellii
Sopen04g021000 Solanum pennellii
Sp2g23900 Schrenkiella parvula
Sp3g17250 Schrenkiella parvula
Sp6g34660 Schrenkiella parvula
TAR371G0611 Trochodendron aralioides
TAR371G0897 Trochodendron aralioides
TAR371G1187 Trochodendron aralioides
TAR629G0163 Trochodendron aralioides
TAR629G0467 Trochodendron aralioides
TAR629G3132 Trochodendron aralioides
TAR629G3152 Trochodendron aralioides
TAR629G3388 Trochodendron aralioides
THA.LOC104818374 Tarenaya hassleriana
THA.LOC104818545 Tarenaya hassleriana
THA.LOC104819374 Tarenaya hassleriana
Thecc.02G158000 Theobroma cacao
Thecc.05G197300 Theobroma cacao
Thhalv10003962m.g Eutrema salsugineum
Thhalv10004347m.g Eutrema salsugineum
Thhalv10013993m.g Eutrema salsugineum
Thhalv10020089m.g Eutrema salsugineum
TPR.G19874 Trifolium pratense
TPR.G19890 Trifolium pratense
TWI15G0476 Tripterygium wilfordii
TWI15G0763 Tripterygium wilfordii
TWI81G0371 Tripterygium wilfordii
unitig_26.g10113 Utricularia gibba
unitig_747.g21790 Utricularia gibba
vmacro16027 Vaccinium macrocarpon
vmacro16028 Vaccinium macrocarpon
vmacro17745 Vaccinium macrocarpon
VMungo0464G0532 Vigna mungo
VMungo0464G1225 Vigna mungo
Zm00001eb066330 Zea mays
Zm00001eb107590 Zea mays
Zm00001eb325420 Zea mays

User provided reference genes

Program Settings