Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22340 Brassica napus
A04p04240 Brassica napus
A04p30210 Brassica napus
A05p06510 Brassica napus
A05p06520 Brassica napus
A09p48750 Brassica napus
Aa31LG10G10730 Aethionema arabicum
Aa31LG5G19730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2379 Anthoceros agrestis
Actinidia07712 Actinidia chinensis
Actinidia13906 Actinidia chinensis
Actinidia27827 Actinidia chinensis
Actinidia29666 Actinidia chinensis
Ah.08g218470 Amaranthus hybridus
Ah.10g036730 Amaranthus hybridus
Ah.15g095540 Amaranthus hybridus
Ah.16g102900 Amaranthus hybridus
AL4G32760 Arabidopsis lyrata
AL4G37470 Arabidopsis lyrata
AL5G37020 Arabidopsis lyrata
AL5G37030 Arabidopsis lyrata
Aqoxy1G00758 Aquilegia oxysepala
Aqoxy5G03674 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.62HDK2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BH1ZA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5CTY8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CN56PJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DU4H48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F32V58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5XEUT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT55IK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LK7ZFW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4LWVX Arachis hypogaea
AT2G36590 Arabidopsis thaliana
AT2G39890 Arabidopsis thaliana
AT3G55740 Arabidopsis thaliana
ATR0199G008 Amborella trichopoda
ATR0199G012 Amborella trichopoda
ATR0199G025 Amborella trichopoda
ATR0618G397 Amborella trichopoda
Atru.chr12.284 Acer truncatum
Atru.chr12.323 Acer truncatum
AUR62001226 Chenopodium quinoa
AUR62001228 Chenopodium quinoa
AUR62012183 Chenopodium quinoa
AUR62022092 Chenopodium quinoa
AUR62022094 Chenopodium quinoa
AUR62022819 Chenopodium quinoa
BcaB01g00065 Brassica carinata
BcaB01g03577 Brassica carinata
BcaB02g08401 Brassica carinata
BcaB02g09073 Brassica carinata
BcaB02g09074 Brassica carinata
BcaB06g29115 Brassica carinata
BcaC01g05456 Brassica carinata
BcaC02g09789 Brassica carinata
BcaC02g12122 Brassica carinata
BcaC02g12123 Brassica carinata
BcaC05g30537 Brassica carinata
BcaC07g39901 Brassica carinata
BcaC07g39903 Brassica carinata
BolC3t15034H Brassica oleracea
BolC4t22377H Brassica oleracea
BolC4t22378H Brassica oleracea
BolC4t25138H Brassica oleracea
BolC4t28265H Brassica oleracea
BolC8t50728H Brassica oleracea
BraA03t11465Z Brassica rapa
BraA04t16139Z Brassica rapa
BraA04t18488Z Brassica rapa
BraA05t19620Z Brassica rapa
BraA05t19621Z Brassica rapa
BraA09t40327Z Brassica rapa
C03p26480 Brassica napus
C04p07600 Brassica napus
C04p07610 Brassica napus
C04p36590 Brassica napus
C04p67650 Brassica napus
C08p31070 Brassica napus
CAN.G115.9 Capsicum annuum
CAN.G503.17 Capsicum annuum
CAN.G503.18 Capsicum annuum
CANSAT56G2349 Cannabis sativa
CANSAT80G0755 Cannabis sativa
CARHR056410 Cardamine hirsuta
CARHR134810 Cardamine hirsuta
CARHR165850 Cardamine hirsuta
Carub.0004s1841 Capsella rubella
Carub.0004s2202 Capsella rubella
Carub.0005s2253 Capsella rubella
Ca_05920_v3 Cicer arietinum L.
Ca_17137_v3 Cicer arietinum L.
Ca_19427_v3 Cicer arietinum L.
Ca_30678_v3 Cicer arietinum L.
Cc02_g07050 Coffea canephora
CDE04G2963 Ceratophyllum demersum
CDE07G1885 Ceratophyllum demersum
Cfa001378 Carpinus fangiana
Cfa015884 Carpinus fangiana
Cfa019263 Carpinus fangiana
Cfa019264 Carpinus fangiana
Ciclev10020150m.g Citrus clementina
Ciclev10023675m.g Citrus clementina
Ciclev10031324m.g Citrus clementina
CiPaw.01G294300 Carya illinoinensis
ClCG07G003810 Citrullus lanatus
COL.COLO4_25606 Corchorus olitorius
Cpa.g.sc19.235 Carica papaya
Cpa.g.sc19.236 Carica papaya
CsaV3_5G008740 Cucumis sativus L.
CSS0021482 Camellia sinensis var. sinensis
DCAR_011774 Daucus carota
DCAR_024842 Daucus carota
DCAR_024843 Daucus carota
Dinv11130 Davidia involucrata
Dinv20931 Davidia involucrata
Dinv21013 Davidia involucrata
Duzib106G0184 Durio zibethinus
Duzib114G0362 Durio zibethinus
ECA233G0013 Erigeron canadensis
ECA238G1370 Erigeron canadensis
ECA246G1372 Erigeron canadensis
EL10Ac2g03402 Beta vulgaris
EL10Ac2g04765 Beta vulgaris
EL10Ac7g18024 Beta vulgaris
Eucgr.B00179 Eucalyptus grandis
Eucgr.G03016 Eucalyptus grandis
FAN01G2677 Fragaria x ananassa
FAN03G3038 Fragaria x ananassa
FAN05G4759 Fragaria x ananassa
FAN06G0684 Fragaria x ananassa
FAN06G1133 Fragaria x ananassa
FAN08G2129 Fragaria x ananassa
FAN10G2380 Fragaria x ananassa
FAN18G3788 Fragaria x ananassa
FAN28G0987 Fragaria x ananassa
FvH4_5g06641 Fragaria vesca
FvH4_5g06650 Fragaria vesca
FvH4_7g23780 Fragaria vesca
Glyma.02G253200 Glycine max
Glyma.05G043000 Glycine max
Glyma.05G043100 Glycine max
Glyma.11G226000 Glycine max
Glyma.14G063200 Glycine max
Glyma.17G125600 Glycine max
Glyma.18G031300 Glycine max
Gohir.A05G303400 Gossypium hirsutum
Gohir.A06G165200 Gossypium hirsutum
Gohir.A10G228300 Gossypium hirsutum
Gohir.D05G302500 Gossypium hirsutum
Gohir.D06G170650 Gossypium hirsutum
Gohir.D10G242300 Gossypium hirsutum
Gorai.009G321600 Gossypium raimondii
Gorai.010G199600 Gossypium raimondii
Gorai.011G278700 Gossypium raimondii
GSVIVG01016390001 Vitis vinifera
GSVIVG01034630001 Vitis vinifera
HanXRQChr02g0050831 Helianthus annuus
HanXRQChr02g0050841 Helianthus annuus
HanXRQChr04g0107621 Helianthus annuus
HanXRQChr08g0222211 Helianthus annuus
HanXRQChr08g0235241 Helianthus annuus
HanXRQChr08g0235251 Helianthus annuus
HanXRQChr09g0247531 Helianthus annuus
HanXRQChr12g0369411 Helianthus annuus
HanXRQChr14g0458871 Helianthus annuus
Haze_17168 Corylus avellana
Hma1.2p1_0026F.1_g016820 Hydrangea macrophylla
Hma1.2p1_0026F.1_g016850 Hydrangea macrophylla
Hma1.2p1_0710F.1_g207460 Hydrangea macrophylla
Hma1.2p1_0710F.1_g207470 Hydrangea macrophylla
HPP92_015342 Vanilla planifolia
HPP92_018043 Vanilla planifolia
HPP92_026963 Vanilla planifolia
Hund13823 Selenicereus undatus
Hund16008 Selenicereus undatus
Hund18504 Selenicereus undatus
Hund18505 Selenicereus undatus
Lalb_Chr07g0183101 Lupinus albus
Lalb_Chr07g0183111 Lupinus albus
Lalb_Chr07g0183121 Lupinus albus
Lalb_Chr12g0201961 Lupinus albus
Lalb_Chr15g0084371 Lupinus albus
Lalb_Chr15g0084401 Lupinus albus
Lalb_Chr17g0346521 Lupinus albus
Lalb_Chr18g0052801 Lupinus albus
Lalb_Chr18g0052811 Lupinus albus
Lalb_Chr18g0052821 Lupinus albus
Lalb_Chr18g0052841 Lupinus albus
Lj4g0002408 Lotus japonicus
Lj6g0028209 Lotus japonicus
Lj8A73G48 Lonicera japonica
Lj9A441T88 Lonicera japonica
LjContig00141g0003808 Lotus japonicus
Lsat_1_v5_gn_2_120300 Lactuca sativa
Lsat_1_v5_gn_4_69740 Lactuca sativa
Lsat_1_v5_gn_5_13860 Lactuca sativa
Lsat_1_v5_gn_8_15101 Lactuca sativa
Manes.07G124000 Manihot esculenta
Manes.10G019500 Manihot esculenta
MBI05_g36622_MAGBIO Magnolia biondii
MBI06_g02294_MAGBIO Magnolia biondii
MD01G1145200 Malus domestica
MD06G1162100 Malus domestica
MD07G1212200 Malus domestica
Medtr3g069960 Medicago truncatula
Medtr4g104510 Medicago truncatula
Medtr5g081630 Medicago truncatula
MELO3C026572.2 Cucumis melo
MELO3C026573.2 Cucumis melo
Migut.F00720 Erythranthe guttata
Migut.F01468 Erythranthe guttata
Migut.F01568 Erythranthe guttata
MSTRG.235 Avicennia marina
MSTRG.8303 Avicennia marina
MSTRG.8978 Avicennia marina
Nitab4.5_0000153g0010 Nicotiana tabacum
Nitab4.5_0000278g0090 Nicotiana tabacum
Nitab4.5_0000278g0100 Nicotiana tabacum
Nitab4.5_0000278g0130 Nicotiana tabacum
Nitab4.5_0000873g0010 Nicotiana tabacum
Nitab4.5_0000873g0030 Nicotiana tabacum
Nitab4.5_0000873g0040 Nicotiana tabacum
Nitab4.5_0001322g0020 Nicotiana tabacum
Nitab4.5_0002057g0020 Nicotiana tabacum
Nitab4.5_0004720g0010 Nicotiana tabacum
Nitab4.5_0005850g0040 Nicotiana tabacum
Nitab4.5_0006950g0010 Nicotiana tabacum
Nitab4.5_0010563g0010 Nicotiana tabacum
Nn1g05171 Nelumbo nucifera
Nn2g13570 Nelumbo nucifera
Oeu055821.2 Olea europaea
Os01g0908600 Oryza sativa ssp. japonica
Os03g0644400 Oryza sativa ssp. japonica
Os07g0100800 Oryza sativa ssp. japonica
Peaxi162Scf00401g00003 Petunia axillaris
Peaxi162Scf00951g00333 Petunia axillaris
Peaxi162Scf00951g00334 Petunia axillaris
Peaxi162Scf00957g00015 Petunia axillaris
Peaxi162Scf00957g00018 Petunia axillaris
PGR142G1555 Punica granatum
PGR142G4042 Punica granatum
PGR142G4392 Punica granatum
PGSC0003DMG400013981 Solanum tuberosum
PGSC0003DMG400013982 Solanum tuberosum
PGSC0003DMG400027187 Solanum tuberosum
PGSC0003DMG400027188 Solanum tuberosum
Phvul.001G239300 Phaseolus vulgaris
Phvul.003G206600 Phaseolus vulgaris
Phvul.008G227600 Phaseolus vulgaris
Potri.008G062900 Populus trichocarpa
Potri.010G194600 Populus trichocarpa
Pp3c21_14080 Physcomitrium patens
Pp3c24_3870 Physcomitrium patens
Pp3c9_4450 Physcomitrium patens
Prupe.2G244500 Prunus persica
Prupe.5G162500 Prunus persica
Prupe.5G162600 Prunus persica
Prupe.5G162700 Prunus persica
Psat2g036000 Pisum sativum
Psat4g061360 Pisum sativum
Psat4g062440 Pisum sativum
Psat5g127640 Pisum sativum
Psat6g108440 Pisum sativum
PSO063G3189 Papaver somniferum
PSO339G6438 Papaver somniferum
PSO384G4443 Papaver somniferum
PSO425G0027 Papaver somniferum
PSO585G0004 Papaver somniferum
PSO782G0471 Papaver somniferum
PSO782G5069 Papaver somniferum
QL10p006052 Quercus lobata
QL10p006081 Quercus lobata
QL10p006095 Quercus lobata
RcHm_v2.0_Chr1g0369121 Rosa chinensis
RcHm_v2.0_Chr7g0192031 Rosa chinensis
RcHm_v2.0_Chr7g0192041 Rosa chinensis
Rhsim03G0139000 Rhododendron simsii
Rhsim08G0180100 Rhododendron simsii
Rhsim08G0181200 Rhododendron simsii
Rhsim09G0171100 Rhododendron simsii
Sabra08G0046400 Salix brachista
Sabra10G0149600 Salix brachista
SalBow5G5530 Salvia bowleyana
Sc11g0007540 Simmondsia chinensis
Sc22g0004260 Simmondsia chinensis
Sc22g0004280 Simmondsia chinensis
Sed0025174 Sechium edule
Sed0026733 Sechium edule
SEGI_01891 Sequoiadendron giganteum
SEGI_07715 Sequoiadendron giganteum
SEGI_09012 Sequoiadendron giganteum
SEGI_12420 Sequoiadendron giganteum
SEGI_17611 Sequoiadendron giganteum
SEGI_27337 Sequoiadendron giganteum
SEGI_35446 Sequoiadendron giganteum
SEGI_38989 Sequoiadendron giganteum
SEGI_41247 Sequoiadendron giganteum
SGA_v2.0_scaffold343G49452 Striga asiatica
SGA_v2.0_scaffold76G25046 Striga asiatica
SHI03556 Sapria himalayana
Solyc03g096380.3 Solanum lycopersicum
Solyc03g096390.3 Solanum lycopersicum
Solyc05g052820.3 Solanum lycopersicum
Solyc05g052830.3 Solanum lycopersicum
Sopen03g026500 Solanum pennellii
Sopen03g026520 Solanum pennellii
Sopen05g031330 Solanum pennellii
Sopen05g031340 Solanum pennellii
Sp4g22190 Schrenkiella parvula
Sp4g22200 Schrenkiella parvula
Sp5g06730 Schrenkiella parvula
TAR374G0376 Trochodendron aralioides
TAR374G0589 Trochodendron aralioides
TAR374G0602 Trochodendron aralioides
TAR374G0964 Trochodendron aralioides
TAR633G2171 Trochodendron aralioides
TAR636G0969 Trochodendron aralioides
TAR636G1521 Trochodendron aralioides
TAR636G2821 Trochodendron aralioides
THA.LOC104809611 Tarenaya hassleriana
THA.LOC104810057 Tarenaya hassleriana
Thecc.10G028400 Theobroma cacao
Thhalv10010386m.g Eutrema salsugineum
Thhalv10016672m.g Eutrema salsugineum
TPR.G29811 Trifolium pratense
TPR.G37481 Trifolium pratense
TPR.G8054 Trifolium pratense
TWI09G0365 Tripterygium wilfordii
TWI53G0577 Tripterygium wilfordii
unitig_37.g12014 Utricularia gibba
vmacro07006 Vaccinium macrocarpon
vmacro10076 Vaccinium macrocarpon
vmacro19274 Vaccinium macrocarpon
VMungo0647G0016 Vigna mungo
VMungo1215G3283 Vigna mungo
VMungo1383G2304 Vigna mungo
Zm00001eb144010 Zea mays
Zm00001eb297990 Zea mays

User provided reference genes

Program Settings