Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14860 Brassica napus
A01p14880 Brassica napus
A01p18630 Brassica napus
A01p22010 Brassica napus
A01p24700 Brassica napus
A01p30320 Brassica napus
A01p30620 Brassica napus
A02p26310 Brassica napus
A03p29330 Brassica napus
A03p54520 Brassica napus
A03p54530 Brassica napus
A03p68000 Brassica napus
A06p23060 Brassica napus
A07p07110 Brassica napus
A08p08600 Brassica napus
A09p25720 Brassica napus
A09p27900 Brassica napus
A09p42660 Brassica napus
A09p47870 Brassica napus
A10p08180 Brassica napus
A10p09480 Brassica napus
A10p09890 Brassica napus
Aa31LG6G6770 Aethionema arabicum
Aa31LG9G10930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1038 Anthoceros agrestis
Actinidia03143 Actinidia chinensis
Actinidia08592 Actinidia chinensis
Actinidia27360 Actinidia chinensis
Actinidia31845 Actinidia chinensis
Actinidia33725 Actinidia chinensis
Actinidia33726 Actinidia chinensis
Ah.07g206400 Amaranthus hybridus
AL6G45470 Arabidopsis lyrata
AL6G45570 Arabidopsis lyrata
AL6G45590 Arabidopsis lyrata
AL7G29840 Arabidopsis lyrata
Aqoxy7G00196 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4FT00Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A992JM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DRAR7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7FQ7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MC01IH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MU20M7 Arachis hypogaea
AT4G11260 Arabidopsis thaliana
AT4G23570 Arabidopsis thaliana
ATR0721G095 Amborella trichopoda
Atru.chr1.332 Acer truncatum
Atru.chr9.2108 Acer truncatum
Atru.ctg97_1.48 Acer truncatum
Atru.ctg97_1.49 Acer truncatum
AUR62021095 Chenopodium quinoa
AUR62031443 Chenopodium quinoa
BcaB01g01623 Brassica carinata
BcaB01g02704 Brassica carinata
BcaB05g23846 Brassica carinata
BcaC01g03449 Brassica carinata
BcaC01g04633 Brassica carinata
BcaC03g16361 Brassica carinata
BcaC04g19690 Brassica carinata
BcaC04g21121 Brassica carinata
BcaC06g35158 Brassica carinata
BcaC09g50973 Brassica carinata
BcaC09g50975 Brassica carinata
BcaNung01067 Brassica carinata
BcaNung03177 Brassica carinata
BcaNung03449 Brassica carinata
BNapus_Darmor_BZH_scaffold_170p00060 Brassica napus
BolC1t01780H Brassica oleracea
BolC1t01784H Brassica oleracea
BolC2t07105H Brassica oleracea
BolC2t08678H Brassica oleracea
BolC2t10211H Brassica oleracea
BolC2t10652H Brassica oleracea
BolC2t12027H Brassica oleracea
BolC3t15856H Brassica oleracea
BolC5t30609H Brassica oleracea
BolC5t32957H Brassica oleracea
BolC5t32958H Brassica oleracea
BolC5t33649H Brassica oleracea
BolC5t33650H Brassica oleracea
BolC7t42437H Brassica oleracea
BolC7t43640H Brassica oleracea
BolC7t45786H Brassica oleracea
BolC9t54327H Brassica oleracea
BolC9t54790H Brassica oleracea
BolC9t55500H Brassica oleracea
BolC9t55951H Brassica oleracea
BolC9t56378H Brassica oleracea
BolC9t57504H Brassica oleracea
BolC9t58607H Brassica oleracea
BraA01t01428Z Brassica rapa
BraA01t01429Z Brassica rapa
BraA01t01813Z Brassica rapa
BraA01t02107Z Brassica rapa
BraA01t02382Z Brassica rapa
BraA01t02549Z Brassica rapa
BraA01t02673Z Brassica rapa
BraA01t02982Z Brassica rapa
BraA02t07632Z Brassica rapa
BraA03t12130Z Brassica rapa
BraA03t12513Z Brassica rapa
BraA03t14516Z Brassica rapa
BraA03t14517Z Brassica rapa
BraA05t21250Z Brassica rapa
BraA05t21285Z Brassica rapa
BraA06t25112Z Brassica rapa
BraA06t25402Z Brassica rapa
BraA06t25650Z Brassica rapa
BraA06t26791Z Brassica rapa
BraA07t28649Z Brassica rapa
BraA07t29099Z Brassica rapa
BraA08t32873Z Brassica rapa
BraA09t38114Z Brassica rapa
BraA09t38135Z Brassica rapa
BraA09t38359Z Brassica rapa
BraA09t39741Z Brassica rapa
BraA09t40245Z Brassica rapa
BraA10t43023Z Brassica rapa
BraSC35t45980Z Brassica rapa
BraSC35t45981Z Brassica rapa
BraSC35t45998Z Brassica rapa
C01p18550 Brassica napus
C01p18570 Brassica napus
C02p23890 Brassica napus
C02p26080 Brassica napus
C02p26090 Brassica napus
C02p41840 Brassica napus
C02p41850 Brassica napus
C02p45930 Brassica napus
C02p59670 Brassica napus
C03p35430 Brassica napus
C03p53060 Brassica napus
C03p54060 Brassica napus
C05p11710 Brassica napus
C05p19080 Brassica napus
C05p42290 Brassica napus
C05p42310 Brassica napus
C06p12470 Brassica napus
C07p13870 Brassica napus
C07p19240 Brassica napus
C07p30960 Brassica napus
C07p52880 Brassica napus
C09p14260 Brassica napus
C09p18880 Brassica napus
C09p25940 Brassica napus
C09p30900 Brassica napus
C09p35370 Brassica napus
C09p46510 Brassica napus
C09p47370 Brassica napus
CAN.G126.17 Capsicum annuum
CAN.G204.27 Capsicum annuum
CANSAT21G0043 Cannabis sativa
CANSAT21G0998 Cannabis sativa
CANSAT21G1399 Cannabis sativa
CANSAT21G1709 Cannabis sativa
CARHR230950 Cardamine hirsuta
CARHR255330 Cardamine hirsuta
Carub.0006s3011 Capsella rubella
Carub.0007s1759 Capsella rubella
Ca_18030_v3 Cicer arietinum L.
Ca_24534_v3 Cicer arietinum L.
CBR_g30800 Chara braunii
Cc02_g02210 Coffea canephora
CDE04G2043 Ceratophyllum demersum
CDE10G0454 Ceratophyllum demersum
Cfa012250 Carpinus fangiana
Cfa016307 Carpinus fangiana
Cfa016309 Carpinus fangiana
Cfa023726 Carpinus fangiana
Ciclev10005190m.g Citrus clementina
CiPaw.06G004400 Carya illinoinensis
CiPaw.12G018800 Carya illinoinensis
CiPaw.12G088900 Carya illinoinensis
ClCG05G008510 Citrullus lanatus
COL.COLO4_29082 Corchorus olitorius
COL.COLO4_30287 Corchorus olitorius
COL.COLO4_30633 Corchorus olitorius
Cpa.g.sc107.130 Carica papaya
Cpa.g.sc1838.1 Carica papaya
Cpa.g.sc1838.2 Carica papaya
Cpa.g.sc3.1 Carica papaya
Cre12.g513600 Chlamydomonas reinhardtii
CsaV3_3G017600 Cucumis sativus L.
CSS0006504 Camellia sinensis var. sinensis
CSS0028210 Camellia sinensis var. sinensis
CSS0039910 Camellia sinensis var. sinensis
DCAR_010650 Daucus carota
Dinv28377 Davidia involucrata
Dinv35270 Davidia involucrata
Dinv37592 Davidia involucrata
Duzib068G1100 Durio zibethinus
Duzib205G0940 Durio zibethinus
ECA233G5919 Erigeron canadensis
ECA238G4709 Erigeron canadensis
EL10Ac3g05391 Beta vulgaris
Eucgr.A02502 Eucalyptus grandis
Eucgr.A02503 Eucalyptus grandis
Eucgr.A02714 Eucalyptus grandis
Eucgr.D01807 Eucalyptus grandis
FAN06G1813 Fragaria x ananassa
FAN06G4606 Fragaria x ananassa
FAN10G0131 Fragaria x ananassa
FAN10G0799 Fragaria x ananassa
FvH4_7g30490 Fragaria vesca
Glyma.01G222400 Glycine max
Glyma.09G128800 Glycine max
Glyma.10G230000 Glycine max
Glyma.11G021000 Glycine max
Glyma.16G176200 Glycine max
Gohir.A08G085400 Gossypium hirsutum
Gohir.A11G225202 Gossypium hirsutum
Gohir.A12G253000 Gossypium hirsutum
Gohir.D08G109200 Gossypium hirsutum
Gohir.D11G231500 Gossypium hirsutum
Gohir.D12G255426 Gossypium hirsutum
Gohir.D12G255451 Gossypium hirsutum
Gorai.003G069500 Gossypium raimondii
Gorai.004G116900 Gossypium raimondii
Gorai.008G273400 Gossypium raimondii
GSVIVG01019422001 Vitis vinifera
GSVIVG01023184001 Vitis vinifera
GSVIVG01028818001 Vitis vinifera
HanXRQChr13g0392421 Helianthus annuus
HanXRQChr14g0462581 Helianthus annuus
Haze_08751 Corylus avellana
Hma1.2p1_0031F.1_g018380 Hydrangea macrophylla
Hma1.2p1_0327F.1_g126510 Hydrangea macrophylla
Hma1.2p1_1674F.1_g296960 Hydrangea macrophylla
Hma1.2p1_1713F.1_g298910 Hydrangea macrophylla
HPP92_009818 Vanilla planifolia
Hund04803 Selenicereus undatus
Hund11708 Selenicereus undatus
Hund17988 Selenicereus undatus
Lalb_Chr02g0141281 Lupinus albus
Lalb_Chr09g0320811 Lupinus albus
Lalb_Chr21g0305291 Lupinus albus
Lj1C1007T6 Lonicera japonica
Lj1g0008858 Lotus japonicus
Lj1g0027930 Lotus japonicus
Lj2A178T48 Lonicera japonica
Lj2g0006755 Lotus japonicus
LjContig00312_ERROPOS870357g0000946 Lotus japonicus
Lsat_1_v5_gn_2_131520 Lactuca sativa
Lsat_1_v5_gn_8_6441 Lactuca sativa
Manes.02G016700 Manihot esculenta
Manes.06G153900 Manihot esculenta
Mapoly0141s0033 Marchantia polymorpha
MBI06_g33537_MAGBIO Magnolia biondii
MCO11G862 Micromonas commoda
MD01G1210400 Malus domestica
MD07G1280600 Malus domestica
MD10G1039500 Malus domestica
MD10G1039600 Malus domestica
MD10G1039900 Malus domestica
Medtr5g009930 Medicago truncatula
Medtr6g053290 Medicago truncatula
Medtr6g060735 Medicago truncatula
Medtr6g060740 Medicago truncatula
MELO3C006948.2 Cucumis melo
Migut.F00275 Erythranthe guttata
Migut.F01074 Erythranthe guttata
Migut.F01075 Erythranthe guttata
Migut.F01077 Erythranthe guttata
Migut.F01079 Erythranthe guttata
MSTRG.8480 Avicennia marina
MSTRG.8696 Avicennia marina
Nitab4.5_0000472g0280 Nicotiana tabacum
Nitab4.5_0007653g0010 Nicotiana tabacum
Nn1g01692 Nelumbo nucifera
Nn6g32459 Nelumbo nucifera
Oeu009294.1 Olea europaea
Oeu011795.1 Olea europaea
Oeu036893.1 Olea europaea
Os01g0512800 Oryza sativa ssp. japonica
Os01g0624500 Oryza sativa ssp. japonica
Peaxi162Scf00444g00317 Petunia axillaris
Peaxi162Scf00618g00626 Petunia axillaris
PGR031G2632 Punica granatum
PGR042G1296 Punica granatum
PGR142G0565 Punica granatum
PGSC0003DMG400020884 Solanum tuberosum
PGSC0003DMG400028904 Solanum tuberosum
Phvul.002G160300 Phaseolus vulgaris
Phvul.004G104600 Phaseolus vulgaris
Potri.004G071100 Populus trichocarpa
Potri.017G149800 Populus trichocarpa
Pp3c22_12710 Physcomitrium patens
PRCOL_00005083 Prasinoderma coloniale
Prupe.2G302800 Prunus persica
Psat0s1764g0040 Pisum sativum
Psat2g183880 Pisum sativum
PSO266G0044 Papaver somniferum
PSO384G3100 Papaver somniferum
QL02p033314 Quercus lobata
QL09p012344 Quercus lobata
QL93p0326_0012 Quercus lobata
RcHm_v2.0_Chr1g0378791 Rosa chinensis
RcHm_v2.0_Chr1g0378891 Rosa chinensis
RcHm_v2.0_Chr1g0379301 Rosa chinensis
RcHm_v2.0_Chr5g0050331 Rosa chinensis
Rhsim03G0192500 Rhododendron simsii
Rhsim03G0192600 Rhododendron simsii
Rhsim07G0087100 Rhododendron simsii
Rhsim09G0201200 Rhododendron simsii
Sabra04G0047000 Salix brachista
Sabra17G0124700 Salix brachista
SalBow2G1297 Salvia bowleyana
SalBow4G2106 Salvia bowleyana
Sc19g0000960 Simmondsia chinensis
Sc25g0000720 Simmondsia chinensis
Sc25g0000730 Simmondsia chinensis
Sed0008462 Sechium edule
Sed0015019 Sechium edule
SEGI_38474 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05278 Striga asiatica
SGA_v2.0_scaffold55G19713 Striga asiatica
SMO358G0511 Selaginella moellendorffii
Solyc03g007670.4 Solanum lycopersicum
Solyc06g036410.1 Solanum lycopersicum
Solyc06g036420.3 Solanum lycopersicum
Sopen03g003600 Solanum pennellii
Sp6g06190 Schrenkiella parvula
Sp7g21490 Schrenkiella parvula
TAR375G0777 Trochodendron aralioides
TAR629G0046 Trochodendron aralioides
TAR636G2302 Trochodendron aralioides
THA.LOC104813028 Tarenaya hassleriana
THA.LOC104814751 Tarenaya hassleriana
Thecc.03G186400 Theobroma cacao
Thhalv10025590m.g Eutrema salsugineum
Thhalv10028764m.g Eutrema salsugineum
TPR.G6657 Trifolium pratense
TPR.G9167 Trifolium pratense
TWI14G0889 Tripterygium wilfordii
TWI59G0580 Tripterygium wilfordii
unitig_0.g2466 Utricularia gibba
unitig_52.g17724 Utricularia gibba
vmacro06613 Vaccinium macrocarpon
vmacro09808 Vaccinium macrocarpon
vmacro13977 Vaccinium macrocarpon
VMungo0464G1486 Vigna mungo
VMungo1215G1038 Vigna mungo
Zm00001eb159420 Zea mays
Zm00001eb358660 Zea mays

User provided reference genes

Program Settings