Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33120 Brassica napus
A03p42500 Brassica napus
A05p26910 Brassica napus
A05p26920 Brassica napus
Aa31LG8G8410 Aethionema arabicum
Aa31LG8G8420 Aethionema arabicum
Aa31LG9G2160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2694 Anthoceros agrestis
Actinidia00164 Actinidia chinensis
Actinidia12501 Actinidia chinensis
Actinidia12502 Actinidia chinensis
Actinidia30510 Actinidia chinensis
Actinidia32078 Actinidia chinensis
Actinidia32079 Actinidia chinensis
Ah.01g003690 Amaranthus hybridus
Ah.01g014600 Amaranthus hybridus
Ah.15g093450 Amaranthus hybridus
AL3G35970 Arabidopsis lyrata
AL3G35980 Arabidopsis lyrata
AL3G36020 Arabidopsis lyrata
AL5G18570 Arabidopsis lyrata
AL7G32320 Arabidopsis lyrata
Aqoxy4G02095 Aquilegia oxysepala
Aqoxy4G02096 Aquilegia oxysepala
Aqoxy4G02099 Aquilegia oxysepala
Aqoxy4G02100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2VZW82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62D34N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6C63SS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI1LQF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FTMH30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3MG1X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8ZYWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IG5XIH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNA654 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MDYX4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NX9XDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1IBZY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TRUR1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAPR04 Arachis hypogaea
AT3G21820 Arabidopsis thaliana
AT3G21865 Arabidopsis thaliana
ATR0008G001 Amborella trichopoda
ATR0618G228 Amborella trichopoda
ATR0804G013 Amborella trichopoda
Atru.chr6.3145 Acer truncatum
Atru.chr6.3148 Acer truncatum
Atru.chr6.3149 Acer truncatum
Atru.chr8.690 Acer truncatum
Atru.chr8.691 Acer truncatum
AUR62025059 Chenopodium quinoa
AUR62037141 Chenopodium quinoa
AUR62040522 Chenopodium quinoa
AUR62040523 Chenopodium quinoa
BcaB04g19187 Brassica carinata
BcaB04g20555 Brassica carinata
BcaB06g26287 Brassica carinata
BcaB06g26288 Brassica carinata
BcaC01g03476 Brassica carinata
BcaC05g28120 Brassica carinata
BcaC05g28122 Brassica carinata
BcaC09g49122 Brassica carinata
BcaC09g49125 Brassica carinata
BcaC09g49127 Brassica carinata
BcaC09g49129 Brassica carinata
BolC1t04190H Brassica oleracea
BolC1t04191H Brassica oleracea
BolC3t17487H Brassica oleracea
BolC5t32890H Brassica oleracea
BolC5t32893H Brassica oleracea
BraA01t03435Z Brassica rapa
BraA03t13403Z Brassica rapa
BraA05t21571Z Brassica rapa
BraA05t21572Z Brassica rapa
C01p42350 Brassica napus
C01p42360 Brassica napus
C03p52060 Brassica napus
C05p41520 Brassica napus
C05p41560 Brassica napus
CAN.G80.19 Capsicum annuum
CAN.G921.6 Capsicum annuum
CAN.G921.8 Capsicum annuum
CANSAT64G0421 Cannabis sativa
CANSAT64G2761 Cannabis sativa
CARHR097810 Cardamine hirsuta
CARHR097820 Cardamine hirsuta
Carub.0003s2190 Capsella rubella
Carub.0003s2193 Capsella rubella
Ca_27743_v3 Cicer arietinum L.
CBR_g22069 Chara braunii
Cc05_g05050 Coffea canephora
Cc05_g05140 Coffea canephora
CDE01G0775 Ceratophyllum demersum
CDE04G1330 Ceratophyllum demersum
CDE04G3419 Ceratophyllum demersum
CDE07G1567 Ceratophyllum demersum
Cfa014439 Carpinus fangiana
Cfa024134 Carpinus fangiana
Ciclev10015025m.g Citrus clementina
Ciclev10016204m.g Citrus clementina
CiPaw.03G162900 Carya illinoinensis
CiPaw.03G163000 Carya illinoinensis
CiPaw.04G117900 Carya illinoinensis
ClCG02G001770 Citrullus lanatus
ClCG02G008440 Citrullus lanatus
ClCG02G008450 Citrullus lanatus
COL.COLO4_12984 Corchorus olitorius
Cpa.g.sc8.235 Carica papaya
Cpa.g.sc8.236 Carica papaya
Cre01.g041100 Chlamydomonas reinhardtii
Cre02.g116850 Chlamydomonas reinhardtii
Cre06.g283150 Chlamydomonas reinhardtii
CsaV3_2G035180 Cucumis sativus L.
CsaV3_2G035190 Cucumis sativus L.
CsaV3_7G003770 Cucumis sativus L.
CSS0016042 Camellia sinensis var. sinensis
CSS0020073 Camellia sinensis var. sinensis
CSS0024189 Camellia sinensis var. sinensis
CSS0035637 Camellia sinensis var. sinensis
CSS0039018 Camellia sinensis var. sinensis
CSS0049956 Camellia sinensis var. sinensis
DCAR_002621 Daucus carota
DCAR_012956 Daucus carota
DCAR_012957 Daucus carota
DCAR_012959 Daucus carota
DCAR_019211 Daucus carota
Dinv02385 Davidia involucrata
Dinv18531 Davidia involucrata
Dinv39686 Davidia involucrata
Dinv39687 Davidia involucrata
Duzib052G0092 Durio zibethinus
Duzib052G0734 Durio zibethinus
Duzib132G0769 Durio zibethinus
Duzib248G1135 Durio zibethinus
ECA238G0562 Erigeron canadensis
EL10Ac7g17313 Beta vulgaris
EL10Ac9g20654 Beta vulgaris
Eucgr.K00818 Eucalyptus grandis
Eucgr.K00819 Eucalyptus grandis
Eucgr.K00821 Eucalyptus grandis
Eucgr.K00822 Eucalyptus grandis
Eucgr.K00824 Eucalyptus grandis
Eucgr.K00825 Eucalyptus grandis
Eucgr.K00839 Eucalyptus grandis
Eucgr.K00860 Eucalyptus grandis
Eucgr.K00861 Eucalyptus grandis
FAN02G0497 Fragaria x ananassa
FAN05G1073 Fragaria x ananassa
FAN09G1075 Fragaria x ananassa
FAN09G3447 Fragaria x ananassa
FAN14G5299 Fragaria x ananassa
FvH4_6g43540 Fragaria vesca
FvH4_6g43550 Fragaria vesca
Glyma.12G195700 Glycine max
Glyma.12G195800 Glycine max
Glyma.13G037950 Glycine max
Glyma.13G306700 Glycine max
Glyma.13G306800 Glycine max
Gohir.A01G013300 Gossypium hirsutum
Gohir.A03G163600 Gossypium hirsutum
Gohir.A12G134800 Gossypium hirsutum
Gohir.D01G014600 Gossypium hirsutum
Gohir.D02G187000 Gossypium hirsutum
Gohir.D12G138400 Gossypium hirsutum
Gorai.002G016300 Gossypium raimondii
Gorai.005G209300 Gossypium raimondii
Gorai.008G149900 Gossypium raimondii
GSVIVG01008772001 Vitis vinifera
GSVIVG01030624001 Vitis vinifera
GSVIVG01030625001 Vitis vinifera
HanXRQChr02g0039391 Helianthus annuus
HanXRQChr10g0297471 Helianthus annuus
HanXRQChr10g0297501 Helianthus annuus
HanXRQChr15g0479201 Helianthus annuus
HanXRQChr17g0560941 Helianthus annuus
Haze_12897 Corylus avellana
Haze_12898 Corylus avellana
Hma1.2p1_0439F.1_g153260 Hydrangea macrophylla
Hma1.2p1_0613F.1_g189170 Hydrangea macrophylla
HPP92_004139 Vanilla planifolia
HPP92_009055 Vanilla planifolia
HPP92_009391 Vanilla planifolia
HPP92_009396 Vanilla planifolia
Hund01107 Selenicereus undatus
Hund01141 Selenicereus undatus
Lalb_Chr01g0005561 Lupinus albus
Lalb_Chr03g0028901 Lupinus albus
Lalb_Chr14g0375711 Lupinus albus
Lalb_Chr24g0393071 Lupinus albus
Lj1A756G86 Lonicera japonica
Lj3A852T54 Lonicera japonica
Lj3g0010899 Lotus japonicus
Lj3g0012140 Lotus japonicus
Lj3g0025447 Lotus japonicus
Lj8A122T60 Lonicera japonica
Lj8A122T61 Lonicera japonica
Lsat_1_v5_gn_3_136420 Lactuca sativa
Lsat_1_v5_gn_3_43721 Lactuca sativa
Lsat_1_v5_gn_4_69321 Lactuca sativa
Lsat_1_v5_gn_6_102801 Lactuca sativa
Lsat_1_v5_gn_8_129400 Lactuca sativa
Manes.12G078400 Manihot esculenta
Manes.13G073100 Manihot esculenta
Mapoly0037s0074 Marchantia polymorpha
Mapoly0057s0093 Marchantia polymorpha
MBI01_g06556_MAGBIO Magnolia biondii
MBI01_g08957_MAGBIO Magnolia biondii
MBI03_g22259_MAGBIO Magnolia biondii
MBI06_g15670_MAGBIO Magnolia biondii
MBI18_g07895_MAGBIO Magnolia biondii
MBI18_g10800_MAGBIO Magnolia biondii
MBI18_g17390_MAGBIO Magnolia biondii
MBI18_g19140_MAGBIO Magnolia biondii
MBI18_g23508_MAGBIO Magnolia biondii
MBI18_g41217_MAGBIO Magnolia biondii
MBI18_g41692_MAGBIO Magnolia biondii
MCO05G707 Micromonas commoda
MCO06G294 Micromonas commoda
MCO15G351 Micromonas commoda
MCO16G494 Micromonas commoda
MD09G1105000 Malus domestica
MD09G1105100 Malus domestica
MD17G1092700 Malus domestica
Medtr2g088740 Medicago truncatula
Medtr2g088820 Medicago truncatula
Medtr2g088850 Medicago truncatula
MELO3C018802.2 Cucumis melo
MELO3C019235.2 Cucumis melo
MELO3C019236.2 Cucumis melo
Migut.H01220 Erythranthe guttata
Migut.M00394 Erythranthe guttata
Migut.M00395 Erythranthe guttata
MSTRG.12288 Avicennia marina
MSTRG.14154 Avicennia marina
Nitab4.5_0000631g0040 Nicotiana tabacum
Nitab4.5_0001176g0130 Nicotiana tabacum
Nitab4.5_0001176g0150 Nicotiana tabacum
Nitab4.5_0001176g0160 Nicotiana tabacum
Nitab4.5_0005894g0030 Nicotiana tabacum
Nitab4.5_0005894g0040 Nicotiana tabacum
Nitab4.5_0006207g0030 Nicotiana tabacum
Nn1g03668 Nelumbo nucifera
Nn1g06995 Nelumbo nucifera
Oeu011080.1 Olea europaea
Oeu041941.2 Olea europaea
Oeu041959.1 Olea europaea
Oeu052537.1 Olea europaea
Oeu052538.1 Olea europaea
Os04g0629000 Oryza sativa ssp. japonica
Os04g0629100 Oryza sativa ssp. japonica
Os04g0672800 Oryza sativa ssp. japonica
Peaxi162Scf00007g01229 Petunia axillaris
Peaxi162Scf00007g01230 Petunia axillaris
PGR142G0845 Punica granatum
PGR142G2396 Punica granatum
PGSC0003DMG400026174 Solanum tuberosum
Phvul.005G113600 Phaseolus vulgaris
Phvul.005G113700 Phaseolus vulgaris
Potri.007G121600 Populus trichocarpa
Potri.017G038700 Populus trichocarpa
Potri.017G038800 Populus trichocarpa
Pp3c13_21910 Physcomitrium patens
Pp3c3_16800 Physcomitrium patens
Pp3c3_16810 Physcomitrium patens
PRCOL_00001357 Prasinoderma coloniale
PRCOL_00003191 Prasinoderma coloniale
Prupe.3G147600 Prunus persica
Prupe.3G220400 Prunus persica
Prupe.3G220500 Prunus persica
Psat0s4720g0040 Pisum sativum
Psat5g265280 Pisum sativum
Psat5g265320 Pisum sativum
Psat6g077080 Pisum sativum
Psat6g077120 Pisum sativum
PSO063G3135 Papaver somniferum
PSO541G2722 Papaver somniferum
PSO541G4560 Papaver somniferum
PSO675G1171 Papaver somniferum
QL03p043045 Quercus lobata
QL08p033823 Quercus lobata
QL08p033836 Quercus lobata
RcHm_v2.0_Chr2g0160071 Rosa chinensis
RcHm_v2.0_Chr2g0160081 Rosa chinensis
Rhsim04G0056600 Rhododendron simsii
Rhsim06G0158100 Rhododendron simsii
Sabra07G0098300 Salix brachista
Sabra08G0110200 Salix brachista
Sabra11G0073000 Salix brachista
Sabra17G0025700 Salix brachista
Sabra17G0025800 Salix brachista
SalBow1G3276 Salvia bowleyana
SalBow7G2009 Salvia bowleyana
SalBow7G4184 Salvia bowleyana
Sc12g0002380 Simmondsia chinensis
Sc12g0002390 Simmondsia chinensis
Sed0013568 Sechium edule
Sed0014701 Sechium edule
Sed0020603 Sechium edule
Sed0022558 Sechium edule
SEGI_12996 Sequoiadendron giganteum
SEGI_18250 Sequoiadendron giganteum
SEGI_18604 Sequoiadendron giganteum
SEGI_20287 Sequoiadendron giganteum
SEGI_29039 Sequoiadendron giganteum
SEGI_35415 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18333 Striga asiatica
SGA_v2.0_scaffold70G23419 Striga asiatica
SGA_v2.0_scaffold70G23420 Striga asiatica
SMO167G0005 Selaginella moellendorffii
SMO347G0022 Selaginella moellendorffii
SMO356G0403 Selaginella moellendorffii
Solyc07g052570.4 Solanum lycopersicum
Solyc07g052600.3 Solanum lycopersicum
Solyc12g005760.2 Solanum lycopersicum
Sopen07g026180 Solanum pennellii
Sopen07g026210 Solanum pennellii
Sopen12g001680 Solanum pennellii
Sp3g19820 Schrenkiella parvula
Sp3g19830 Schrenkiella parvula
TAR624G1196 Trochodendron aralioides
TAR627G0099 Trochodendron aralioides
TAR629G0018 Trochodendron aralioides
TAR629G3333 Trochodendron aralioides
THA.LOC104802537 Tarenaya hassleriana
THA.LOC104808497 Tarenaya hassleriana
THA.LOC104821752 Tarenaya hassleriana
Thecc.02G162300 Theobroma cacao
Thecc.02G162400 Theobroma cacao
Thhalv10020639m.g Eutrema salsugineum
Thhalv10021287m.g Eutrema salsugineum
TPR.G4158 Trifolium pratense
TPR.G4167 Trifolium pratense
TWI18G0733 Tripterygium wilfordii
TWI18G0897 Tripterygium wilfordii
TWI75G1691 Tripterygium wilfordii
unitig_21.g20003 Utricularia gibba
unitig_26.g9659 Utricularia gibba
unitig_578.g16774 Utricularia gibba
vmacro09324 Vaccinium macrocarpon
vmacro10802 Vaccinium macrocarpon
vmacro12227 Vaccinium macrocarpon
vmacro12228 Vaccinium macrocarpon
VMungo1080G1248 Vigna mungo
VMungo1080G1612 Vigna mungo
Zm00001eb066610 Zea mays
Zm00001eb069570 Zea mays
Zm00001eb069580 Zea mays
Zm00001eb431430 Zea mays

User provided reference genes

Program Settings