Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39830 Brassica napus
A02p39850 Brassica napus
A02p43550 Brassica napus
A06p31660 Brassica napus
A07p42960 Brassica napus
Aa31LG1G17060 Aethionema arabicum
Ah.16g104780 Amaranthus hybridus
AL1G47920 Arabidopsis lyrata
AL6G36890 Arabidopsis lyrata
AL6G36900 Arabidopsis lyrata
AL8G42360 Arabidopsis lyrata
Aqoxy409s002 Aquilegia oxysepala
Aqoxy6G01339 Aquilegia oxysepala
Aqoxy6G01811 Aquilegia oxysepala
Aqoxy7G03546 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25GHKR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EKN8D2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FB2YWA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IF8EJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IF9NXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SY014U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z845V7 Arachis hypogaea
AT5G25250 Arabidopsis thaliana
AT5G25260 Arabidopsis thaliana
AT5G64870 Arabidopsis thaliana
ATR0618G033 Amborella trichopoda
ATR0618G317 Amborella trichopoda
ATR0681G082 Amborella trichopoda
ATR0681G151 Amborella trichopoda
ATR0681G196 Amborella trichopoda
ATR0681G346 Amborella trichopoda
ATR0716G043 Amborella trichopoda
AUR62007275 Chenopodium quinoa
AUR62007276 Chenopodium quinoa
AUR62007277 Chenopodium quinoa
AUR62011456 Chenopodium quinoa
AUR62011539 Chenopodium quinoa
AUR62012440 Chenopodium quinoa
AUR62012441 Chenopodium quinoa
AUR62016358 Chenopodium quinoa
AUR62016600 Chenopodium quinoa
AUR62016601 Chenopodium quinoa
AUR62031564 Chenopodium quinoa
AUR62031565 Chenopodium quinoa
AUR62036325 Chenopodium quinoa
BcaB02g09836 Brassica carinata
BcaB03g15946 Brassica carinata
BcaB07g29763 Brassica carinata
BcaC01g02718 Brassica carinata
BcaC01g02720 Brassica carinata
BcaC03g18284 Brassica carinata
BcaC03g18286 Brassica carinata
BcaC03g18288 Brassica carinata
BcaC03g18289 Brassica carinata
BcaC07g38417 Brassica carinata
BcaC08g47605 Brassica carinata
BolC2t12030H Brassica oleracea
BolC2t12430H Brassica oleracea
BolC2t12432H Brassica oleracea
BolC3t18391H Brassica oleracea
BolC6t40178H Brassica oleracea
BraA02t08947Z Brassica rapa
BraA02t09282Z Brassica rapa
BraA06t26101Z Brassica rapa
BraA07t31817Z Brassica rapa
C02p59700 Brassica napus
C02p63640 Brassica napus
C02p63660 Brassica napus
C03p61300 Brassica napus
C06p51600 Brassica napus
C08p11780 Brassica napus
CAN.G111.4 Capsicum annuum
CAN.G1585.9 Capsicum annuum
CAN.G199.73 Capsicum annuum
CAN.G407.36 Capsicum annuum
CAN.G407.37 Capsicum annuum
CAN.G638.72 Capsicum annuum
CAN.G804.2 Capsicum annuum
CANSAT35G0972 Cannabis sativa
CANSAT35G1491 Cannabis sativa
CARHR032980 Cardamine hirsuta
CARHR188230 Cardamine hirsuta
CARHR188240 Cardamine hirsuta
CARHR278880 Cardamine hirsuta
Carub.0001s3172 Capsella rubella
Carub.0006s2306 Capsella rubella
Carub.0006s2307 Capsella rubella
Carub.0008s2570 Capsella rubella
CBR_g30843 Chara braunii
CBR_g30844 Chara braunii
CBR_g30848 Chara braunii
CBR_g41042 Chara braunii
Cc00_g03320 Coffea canephora
Cc02_g26720 Coffea canephora
Cc06_g21370 Coffea canephora
Cc08_g00260 Coffea canephora
Cc11_g02790 Coffea canephora
Cc11_g02810 Coffea canephora
Cfa001915 Carpinus fangiana
Cfa018802 Carpinus fangiana
Cfa018803 Carpinus fangiana
Cfa025163 Carpinus fangiana
Ciclev10010308m.g Citrus clementina
Ciclev10010618m.g Citrus clementina
ClCG08G013500 Citrullus lanatus
ClCG08G013510 Citrullus lanatus
COL.COLO4_03388 Corchorus olitorius
COL.COLO4_07463 Corchorus olitorius
COL.COLO4_07464 Corchorus olitorius
COL.COLO4_18902 Corchorus olitorius
COL.COLO4_33194 Corchorus olitorius
Cpa.g.sc187.22 Carica papaya
CsaV3_2G032250 Cucumis sativus L.
CsaV3_2G032260 Cucumis sativus L.
CsaV3_2G032280 Cucumis sativus L.
CSS0004851 Camellia sinensis var. sinensis
CSS0018050 Camellia sinensis var. sinensis
CSS0021814 Camellia sinensis var. sinensis
CSS0024378 Camellia sinensis var. sinensis
CSS0026340 Camellia sinensis var. sinensis
CSS0027205 Camellia sinensis var. sinensis
CSS0031130 Camellia sinensis var. sinensis
CSS0041422 Camellia sinensis var. sinensis
DCAR_002171 Daucus carota
DCAR_006188 Daucus carota
DCAR_020553 Daucus carota
DCAR_020554 Daucus carota
DCAR_021363 Daucus carota
Dinv12790 Davidia involucrata
Dinv18176 Davidia involucrata
Dinv18179 Davidia involucrata
Dinv23315 Davidia involucrata
Dinv23316 Davidia involucrata
Duzib093G0781 Durio zibethinus
ECA233G0211 Erigeron canadensis
ECA233G3077 Erigeron canadensis
ECA234G1579 Erigeron canadensis
ECA292G0003 Erigeron canadensis
EL10Ac2g04160 Beta vulgaris
EL10Ac9g21852 Beta vulgaris
Eucgr.J00036 Eucalyptus grandis
Eucgr.J00037 Eucalyptus grandis
Eucgr.J00038 Eucalyptus grandis
FAN02G4082 Fragaria x ananassa
FAN09G3516 Fragaria x ananassa
FAN14G1131 Fragaria x ananassa
FAN15G2872 Fragaria x ananassa
FAN20G1500 Fragaria x ananassa
FAN24G0704 Fragaria x ananassa
FAN24G1346 Fragaria x ananassa
FAN27G0493 Fragaria x ananassa
FAN27G2787 Fragaria x ananassa
FvH4_2g25581 Fragaria vesca
FvH4_2g28360 Fragaria vesca
FvH4_2g28361 Fragaria vesca
FvH4_2g28363 Fragaria vesca
FvH4_6g10190 Fragaria vesca
Glyma.04G064400 Glycine max
Glyma.06G065600 Glycine max
Gohir.A09G121100 Gossypium hirsutum
Gohir.D09G117200 Gossypium hirsutum
Gorai.006G135600 Gossypium raimondii
GSVIVG01017520001 Vitis vinifera
GSVIVG01035926001 Vitis vinifera
HanXRQChr12g0361931 Helianthus annuus
HanXRQChr13g0403141 Helianthus annuus
HanXRQChr13g0403151 Helianthus annuus
HanXRQChr13g0403161 Helianthus annuus
HanXRQChr13g0403171 Helianthus annuus
HanXRQChr13g0403181 Helianthus annuus
Haze_07206 Corylus avellana
Haze_07207 Corylus avellana
Haze_16627 Corylus avellana
Haze_16630 Corylus avellana
Hma1.2p1_0228F.1_g096530 Hydrangea macrophylla
Hma1.2p1_0493F.1_g164820 Hydrangea macrophylla
HPP92_022432 Vanilla planifolia
Hund29837 Selenicereus undatus
Hund29838 Selenicereus undatus
Hund29839 Selenicereus undatus
Hund29840 Selenicereus undatus
Lalb_Chr23g0268381 Lupinus albus
Lj1g0005637 Lotus japonicus
Lj3A853T76 Lonicera japonica
Lj3A853T80 Lonicera japonica
Lj6A724T64 Lonicera japonica
Lj8A730T31 Lonicera japonica
Lj8A731T42 Lonicera japonica
Lj8C730T5 Lonicera japonica
Lj8C731T5 Lonicera japonica
Lsat_1_v5_gn_1_88440 Lactuca sativa
Lsat_1_v5_gn_1_88460 Lactuca sativa
Lsat_1_v5_gn_2_33301 Lactuca sativa
Lsat_1_v5_gn_2_33321 Lactuca sativa
Lsat_1_v5_gn_3_61080 Lactuca sativa
Lsat_1_v5_gn_3_61100 Lactuca sativa
Lsat_1_v5_gn_5_127701 Lactuca sativa
Lsat_1_v5_gn_5_171920 Lactuca sativa
Lsat_1_v5_gn_5_171940 Lactuca sativa
Lsat_1_v5_gn_6_20460 Lactuca sativa
Lsat_1_v5_gn_6_20521 Lactuca sativa
Lsat_1_v5_gn_6_20540 Lactuca sativa
Lsat_1_v5_gn_6_20560 Lactuca sativa
Lsat_1_v5_gn_6_20580 Lactuca sativa
Lsat_1_v5_gn_6_20641 Lactuca sativa
Lsat_1_v5_gn_7_19200 Lactuca sativa
Lsat_1_v5_gn_7_19220 Lactuca sativa
Manes.16G125700 Manihot esculenta
Mapoly0085s0003 Marchantia polymorpha
Mapoly0085s0004 Marchantia polymorpha
MD08G1153100 Malus domestica
MD15G1129900 Malus domestica
MD15G1130000 Malus domestica
MD15G1130100 Malus domestica
MD16G1287500 Malus domestica
MD16G1287600 Malus domestica
Medtr1g071130 Medicago truncatula
Medtr1g073400 Medicago truncatula
Medtr1g083190 Medicago truncatula
Medtr1g115145 Medicago truncatula
Medtr3g065540 Medicago truncatula
Medtr3g106420 Medicago truncatula
Medtr3g106430 Medicago truncatula
Medtr3g106470 Medicago truncatula
Medtr3g106480 Medicago truncatula
Medtr3g106485 Medicago truncatula
Medtr8g063830 Medicago truncatula
MELO3C011277.2 Cucumis melo
MELO3C011278.2 Cucumis melo
Migut.A00150 Erythranthe guttata
Migut.A00151 Erythranthe guttata
Migut.E00794 Erythranthe guttata
Migut.E01820 Erythranthe guttata
Migut.O00637 Erythranthe guttata
Nitab4.5_0000436g0050 Nicotiana tabacum
Nitab4.5_0000563g0230 Nicotiana tabacum
Nitab4.5_0002503g0040 Nicotiana tabacum
Nitab4.5_0003331g0140 Nicotiana tabacum
Nitab4.5_0003811g0090 Nicotiana tabacum
Nitab4.5_0004217g0070 Nicotiana tabacum
Nitab4.5_0004837g0010 Nicotiana tabacum
Nitab4.5_0008082g0020 Nicotiana tabacum
Nn1g02796 Nelumbo nucifera
Nn1g06402 Nelumbo nucifera
Nn2g11706 Nelumbo nucifera
Nn3g18210 Nelumbo nucifera
Nn7g37538 Nelumbo nucifera
Nn8g39691 Nelumbo nucifera
Nn8g39693 Nelumbo nucifera
Oeu041991.1 Olea europaea
Oeu041994.1 Olea europaea
Oeu052145.1 Olea europaea
Os10g0481500 Oryza sativa ssp. japonica
Os10g0482450 Oryza sativa ssp. japonica
Os10g0482700 Oryza sativa ssp. japonica
Peaxi162Scf00019g02515 Petunia axillaris
Peaxi162Scf00242g00223 Petunia axillaris
Peaxi162Scf00430g00113 Petunia axillaris
Peaxi162Scf00430g00218 Petunia axillaris
Peaxi162Scf00853g00311 Petunia axillaris
PGR042G2644 Punica granatum
PGSC0003DMG400013396 Solanum tuberosum
PGSC0003DMG400014199 Solanum tuberosum
PGSC0003DMG400014200 Solanum tuberosum
PGSC0003DMG400026139 Solanum tuberosum
PGSC0003DMG400031173 Solanum tuberosum
PGSC0003DMG401020860 Solanum tuberosum
PGSC0003DMG402020860 Solanum tuberosum
Phvul.009G090700 Phaseolus vulgaris
Potri.006G258900 Populus trichocarpa
Potri.018G022900 Populus trichocarpa
Pp3c3_21910 Physcomitrium patens
Prupe.1G485400 Prunus persica
Prupe.1G485500 Prunus persica
Prupe.1G485600 Prunus persica
Psat5g030720 Pisum sativum
Psat5g030760 Pisum sativum
Psat5g030840 Pisum sativum
PSO017G0001 Papaver somniferum
PSO063G3791 Papaver somniferum
PSO063G6104 Papaver somniferum
PSO478G4734 Papaver somniferum
PSO699G0057 Papaver somniferum
PSO782G5262 Papaver somniferum
QL02p020497 Quercus lobata
QL05p031252 Quercus lobata
QL05p031263 Quercus lobata
QL05p033847 Quercus lobata
QL05p054947 Quercus lobata
RcHm_v2.0_Chr1g0356261 Rosa chinensis
RcHm_v2.0_Chr1g0356271 Rosa chinensis
RcHm_v2.0_Chr1g0356281 Rosa chinensis
RcHm_v2.0_Chr3g0460921 Rosa chinensis
RcHm_v2.0_Chr4g0425621 Rosa chinensis
RcHm_v2.0_Chr4g0425631 Rosa chinensis
RcHm_v2.0_Chr6g0297281 Rosa chinensis
RcHm_v2.0_Chr6g0297301 Rosa chinensis
RcHm_v2.0_Chr6g0297311 Rosa chinensis
Rhsim07G0161700 Rhododendron simsii
Rhsim08G0208700 Rhododendron simsii
Rhsim08G0209000 Rhododendron simsii
Rhsim08G0209100 Rhododendron simsii
Rhsim09G0075500 Rhododendron simsii
Rhsim13G0011800 Rhododendron simsii
Sabra06G0202400 Salix brachista
Sabra18G0025400 Salix brachista
SalBow4G0473 Salvia bowleyana
Sc23g0006590 Simmondsia chinensis
Sc23g0006600 Simmondsia chinensis
Sed0017745 Sechium edule
Sed0019233 Sechium edule
Sed0019981 Sechium edule
Sed0025814 Sechium edule
SGA_v2.0_scaffold20G09084 Striga asiatica
Solyc01g089910.4 Solanum lycopersicum
Solyc03g005420.2 Solanum lycopersicum
Solyc03g117250.4 Solanum lycopersicum
Solyc06g065850.3 Solanum lycopersicum
Sopen01g035750 Solanum pennellii
Sopen03g001440 Solanum pennellii
Sopen03g036140 Solanum pennellii
Sopen06g024340 Solanum pennellii
Sp2g22290 Schrenkiella parvula
Sp2g27950 Schrenkiella parvula
TAR383G0213 Trochodendron aralioides
TAR383G0572 Trochodendron aralioides
TAR383G0603 Trochodendron aralioides
Thecc.05G152100 Theobroma cacao
Thecc.09G020100 Theobroma cacao
Thhalv10004111m.g Eutrema salsugineum
Thhalv10004164m.g Eutrema salsugineum
Thhalv10023578m.g Eutrema salsugineum
TPR.G31136 Trifolium pratense
TPR.G3126 Trifolium pratense
TPR.G3154 Trifolium pratense
TPR.G3161 Trifolium pratense
TPR.G781 Trifolium pratense
TWI31G0621 Tripterygium wilfordii
TWI34G1868 Tripterygium wilfordii
TWI63G0455 Tripterygium wilfordii
vmacro05154 Vaccinium macrocarpon
vmacro05155 Vaccinium macrocarpon
vmacro05156 Vaccinium macrocarpon
vmacro19032 Vaccinium macrocarpon
vmacro22579 Vaccinium macrocarpon
vmacro22580 Vaccinium macrocarpon
VMungo0331G1293 Vigna mungo
VMungo1309G0996 Vigna mungo
Zm00001eb221520 Zea mays

User provided reference genes

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