Gene: AT5G25260
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G25260
- Transcript Identifier AT5G25260.1
- Gene Type Coding gene
- Location Chr5 : 8752751-8754282 : positive
Gene Family Information
- ID HOM05D001885
- #Genes/#Species 349/84
- Phylogenetic origin
- ID ORTHO05D001871
- #Genes/#Species 344/84
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G25260.1
- uniprot Q4V3D6
Descriptions
- Description SPFH/Band 7/PHB domain-containing membrane-associated protein family
- Computational description SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G25250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0072659 | IBA | Gene Ontology | protein localization to plasma membrane | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 3 |
| GO:0009536 | HDA | Gene Ontology | plastid | 4 |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 2 |
| GO:0044853 | IDA IBA | Gene Ontology | plasma membrane raft | 1 5 |
| GO:0005901 | IEA | GOA Database | caveola | |
| GO:0005774 | IDA | GOA Database | vacuolar membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.4.5.1 | Vesicle trafficking.endocytic trafficking.clathrin-independent machinery.adapter protein (Flotillin) |