Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26070 Brassica napus
A09p38350 Brassica napus
A09p55480 Brassica napus
Aa31sc113G20 Aethionema arabicum
Aa31sc113G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1790 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis
Actinidia08249 Actinidia chinensis
Actinidia10192 Actinidia chinensis
Actinidia22689 Actinidia chinensis
Actinidia38101 Actinidia chinensis
Ah.05g167110 Amaranthus hybridus
AL1G41280 Arabidopsis lyrata
AL1G41290 Arabidopsis lyrata
AL4G19860 Arabidopsis lyrata
Aqoxy5G00884 Aquilegia oxysepala
Aqoxy6G02668 Aquilegia oxysepala
Aqoxy6G02680 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0QZG7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4H8PLX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6NC3R4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWP81L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M057FR Arachis hypogaea
AT1G27750 Arabidopsis thaliana
AT1G27752 Arabidopsis thaliana
ATR0208G021 Amborella trichopoda
ATR0208G030 Amborella trichopoda
Atru.chr13.820 Acer truncatum
Atru.chr13.821 Acer truncatum
AUR62037429 Chenopodium quinoa
AUR62037434 Chenopodium quinoa
AUR62038791 Chenopodium quinoa
AUR62038814 Chenopodium quinoa
BcaB03g13969 Brassica carinata
BcaC01g01572 Brassica carinata
BcaC05g26775 Brassica carinata
BcaC06g35319 Brassica carinata
BolC3t19706H Brassica oleracea
BolC5t31365H Brassica oleracea
BolC5t31366H Brassica oleracea
BolC7t42252H Brassica oleracea
BolC7t42255H Brassica oleracea
BraA08t34557Z Brassica rapa
BraA09t39344Z Brassica rapa
BraA09t40950Z Brassica rapa
C03p74580 Brassica napus
C05p26440 Brassica napus
C05p26450 Brassica napus
C07p17470 Brassica napus
CAN.G724.12 Capsicum annuum
CANSAT11G0135 Cannabis sativa
CANSAT25G1585 Cannabis sativa
CANSAT25G3038 Cannabis sativa
CARHR027260 Cardamine hirsuta
CARHR027270 Cardamine hirsuta
Carub.0001s2626 Capsella rubella
Carub.0001s2627 Capsella rubella
Ca_00257_v3 Cicer arietinum L.
Ca_01001_v3 Cicer arietinum L.
Ca_01989_v3 Cicer arietinum L.
Ca_02659_v3 Cicer arietinum L.
Ca_02908_v3 Cicer arietinum L.
Ca_03036_v3 Cicer arietinum L.
Ca_03081_v3 Cicer arietinum L.
Ca_03456_v3 Cicer arietinum L.
Ca_03734_v3 Cicer arietinum L.
Ca_03786_v3 Cicer arietinum L.
Ca_03816_v3 Cicer arietinum L.
Ca_03822_v3 Cicer arietinum L.
Ca_04437_v3 Cicer arietinum L.
Ca_04972_v3 Cicer arietinum L.
Ca_06116_v3 Cicer arietinum L.
Ca_06875_v3 Cicer arietinum L.
Ca_07456_v3 Cicer arietinum L.
Ca_11166_v3 Cicer arietinum L.
Ca_11927_v3 Cicer arietinum L.
Ca_12381_v3 Cicer arietinum L.
Ca_12573_v3 Cicer arietinum L.
Ca_12989_v3 Cicer arietinum L.
Ca_12997_v3 Cicer arietinum L.
Ca_13223_v3 Cicer arietinum L.
Ca_13228_v3 Cicer arietinum L.
Ca_13701_v3 Cicer arietinum L.
Ca_13711_v3 Cicer arietinum L.
Ca_13858_v3 Cicer arietinum L.
Ca_14158_v3 Cicer arietinum L.
Ca_14306_v3 Cicer arietinum L.
Ca_14401_v3 Cicer arietinum L.
Ca_14462_v3 Cicer arietinum L.
Ca_14689_v3 Cicer arietinum L.
Ca_15906_v3 Cicer arietinum L.
Ca_16190_v3 Cicer arietinum L.
Ca_18121_v3 Cicer arietinum L.
Ca_18933_v3 Cicer arietinum L.
Ca_19065_v3 Cicer arietinum L.
Ca_19112_v3 Cicer arietinum L.
Ca_19482_v3 Cicer arietinum L.
Ca_19599_v3 Cicer arietinum L.
Ca_19756_v3 Cicer arietinum L.
Ca_19897_v3 Cicer arietinum L.
Ca_20119_v3 Cicer arietinum L.
Ca_20160_v3 Cicer arietinum L.
Ca_22414_v3 Cicer arietinum L.
Ca_22646_v3 Cicer arietinum L.
Ca_22837_v3 Cicer arietinum L.
Ca_22876_v3 Cicer arietinum L.
Ca_22944_v3 Cicer arietinum L.
Ca_23022_v3 Cicer arietinum L.
Ca_23062_v3 Cicer arietinum L.
Ca_23451_v3 Cicer arietinum L.
Ca_24048_v3 Cicer arietinum L.
Ca_24097_v3 Cicer arietinum L.
Ca_24208_v3 Cicer arietinum L.
Ca_24212_v3 Cicer arietinum L.
Ca_24213_v3 Cicer arietinum L.
Ca_26076_v3 Cicer arietinum L.
Ca_26146_v3 Cicer arietinum L.
Ca_26156_v3 Cicer arietinum L.
Ca_26343_v3 Cicer arietinum L.
Ca_26458_v3 Cicer arietinum L.
Ca_26916_v3 Cicer arietinum L.
Ca_26919_v3 Cicer arietinum L.
Ca_26950_v3 Cicer arietinum L.
Ca_26965_v3 Cicer arietinum L.
Ca_26994_v3 Cicer arietinum L.
Ca_27428_v3 Cicer arietinum L.
Ca_27481_v3 Cicer arietinum L.
Ca_27555_v3 Cicer arietinum L.
Ca_27615_v3 Cicer arietinum L.
Ca_28111_v3 Cicer arietinum L.
Ca_28268_v3 Cicer arietinum L.
Ca_28442_v3 Cicer arietinum L.
Ca_28466_v3 Cicer arietinum L.
Ca_28494_v3 Cicer arietinum L.
Ca_29941_v3 Cicer arietinum L.
Ca_30050_v3 Cicer arietinum L.
Ca_30214_v3 Cicer arietinum L.
Ca_30254_v3 Cicer arietinum L.
Ca_30412_v3 Cicer arietinum L.
Ca_30421_v3 Cicer arietinum L.
Ca_30517_v3 Cicer arietinum L.
Ca_30828_v3 Cicer arietinum L.
Ca_30951_v3 Cicer arietinum L.
Ca_30972_v3 Cicer arietinum L.
Ca_30992_v3 Cicer arietinum L.
Ca_31111_v3 Cicer arietinum L.
Ca_31134_v3 Cicer arietinum L.
Ca_31139_v3 Cicer arietinum L.
Ca_31153_v3 Cicer arietinum L.
Ca_31155_v3 Cicer arietinum L.
Ca_31202_v3 Cicer arietinum L.
Ca_31214_v3 Cicer arietinum L.
Ca_31300_v3 Cicer arietinum L.
Ca_31337_v3 Cicer arietinum L.
CBR_g57086 Chara braunii
CBR_g6294 Chara braunii
CBR_g6612 Chara braunii
Cc10_g05690 Coffea canephora
Cc10_g05700 Coffea canephora
CDE02G0795 Ceratophyllum demersum
CDE06G0223 Ceratophyllum demersum
Cfa000625 Carpinus fangiana
Cfa010207 Carpinus fangiana
Cfa010565 Carpinus fangiana
Cfa013681 Carpinus fangiana
Cfa013682 Carpinus fangiana
Ciclev10003334m.g Citrus clementina
CiPaw.07G175800 Carya illinoinensis
CiPaw.07G175900 Carya illinoinensis
ClCG05G020550 Citrullus lanatus
ClCG05G020560 Citrullus lanatus
COL.COLO4_28516 Corchorus olitorius
Cpa.g.sc142.15 Carica papaya
Cpa.g.sc142.16 Carica papaya
Cpa.g.sc142.17 Carica papaya
Cre09.g398030 Chlamydomonas reinhardtii
Cre13.g568750 Chlamydomonas reinhardtii
CsaV3_4G034990 Cucumis sativus L.
CsaV3_4G035000 Cucumis sativus L.
CSS0015613 Camellia sinensis var. sinensis
CSS0023334 Camellia sinensis var. sinensis
CSS0041216 Camellia sinensis var. sinensis
DCAR_008854 Daucus carota
DCAR_009884 Daucus carota
Dinv44961 Davidia involucrata
Dinv44962 Davidia involucrata
Duzib116G0273 Durio zibethinus
ECA246G2822 Erigeron canadensis
ECA247G3074 Erigeron canadensis
EL10Ac1g02390 Beta vulgaris
EL10Ac1g02391 Beta vulgaris
Eucgr.F02257 Eucalyptus grandis
Eucgr.F02258 Eucalyptus grandis
FAN15G2911 Fragaria x ananassa
FAN15G3244 Fragaria x ananassa
FAN20G0243 Fragaria x ananassa
FAN20G0949 Fragaria x ananassa
FAN24G0874 Fragaria x ananassa
FAN24G3463 Fragaria x ananassa
FAN27G0954 Fragaria x ananassa
FAN27G1994 Fragaria x ananassa
FvH4_2g33210 Fragaria vesca
FvH4_2g33220 Fragaria vesca
Glyma.04G045100 Glycine max
Glyma.06G045600 Glycine max
Glyma.14G088600 Glycine max
Glyma.17G235900 Glycine max
Gohir.A01G122900 Gossypium hirsutum
Gohir.A05G209500 Gossypium hirsutum
Gohir.D01G110700 Gossypium hirsutum
Gohir.D05G212700 Gossypium hirsutum
Gorai.002G135500 Gossypium raimondii
Gorai.009G219200 Gossypium raimondii
GSVIVG01009355001 Vitis vinifera
GSVIVG01009356001 Vitis vinifera
HanXRQChr01g0027941 Helianthus annuus
HanXRQChr05g0145561 Helianthus annuus
HanXRQChr08g0220641 Helianthus annuus
Haze_22323 Corylus avellana
Haze_22324 Corylus avellana
Haze_22325 Corylus avellana
Haze_22326 Corylus avellana
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla
HPP92_009536 Vanilla planifolia
HPP92_009537 Vanilla planifolia
HPP92_019611 Vanilla planifolia
Hund05306 Selenicereus undatus
Hund24034 Selenicereus undatus
Lalb_Chr11g0062861 Lupinus albus
Lalb_Chr22g0355571 Lupinus albus
Lalb_Chr22g0355581 Lupinus albus
Lalb_Chr22g0355591 Lupinus albus
Lalb_Chr24g0399421 Lupinus albus
Lj1g0023876 Lotus japonicus
Lj4A759G42 Lonicera japonica
Lj4A759T48 Lonicera japonica
Lj5g0015061 Lotus japonicus
Lsat_1_v5_gn_1_24340 Lactuca sativa
Lsat_1_v5_gn_6_112340 Lactuca sativa
Manes.05G181200 Manihot esculenta
Manes.05G181300 Manihot esculenta
Mapoly0006s0231 Marchantia polymorpha
Mapoly0067s0042 Marchantia polymorpha
MCO02G333 Micromonas commoda
MD03G1160700 Malus domestica
MD08G1085900 Malus domestica
MD08G1086000 Malus domestica
MD15G1071100 Malus domestica
Medtr1g018350 Medicago truncatula
Medtr3g103040 Medicago truncatula
MELO3C016811.2 Cucumis melo
Migut.N02775 Erythranthe guttata
MSTRG.1026 Avicennia marina
Nitab4.5_0000164g0140 Nicotiana tabacum
Nitab4.5_0000164g0150 Nicotiana tabacum
Nitab4.5_0003803g0010 Nicotiana tabacum
Nitab4.5_0003803g0020 Nicotiana tabacum
Nn1g04585 Nelumbo nucifera
Nn5g30557 Nelumbo nucifera
Oeu022102.3 Olea europaea
Oeu057374.1 Olea europaea
Os01g0765200 Oryza sativa ssp. japonica
Os01g0765300 Oryza sativa ssp. japonica
Os03g0205000 Oryza sativa ssp. japonica
Peaxi162Scf00081g00176 Petunia axillaris
Peaxi162Scf00081g01617 Petunia axillaris
PGR031G1956 Punica granatum
PGSC0003DMG400021524 Solanum tuberosum
PGSC0003DMG400024243 Solanum tuberosum
PGSC0003DMG400024244 Solanum tuberosum
Phvul.001G026900 Phaseolus vulgaris
Phvul.009G071000 Phaseolus vulgaris
Potri.014G016900 Populus trichocarpa
Potri.014G017000 Populus trichocarpa
Pp3c24_10810 Physcomitrium patens
Pp3c2_23190 Physcomitrium patens
Prupe.1G423800 Prunus persica
Prupe.1G423900 Prunus persica
Psat0s3943g0040 Pisum sativum
Psat0ss2518g0200 Pisum sativum
Psat0ss2518g0240 Pisum sativum
Psat1g176640 Pisum sativum
Psat4g136520 Pisum sativum
Psat5g005720 Pisum sativum
Psat5g005800 Pisum sativum
Psat6g016280 Pisum sativum
PSO017G6116 Papaver somniferum
PSO541G1802 Papaver somniferum
PSO675G4263 Papaver somniferum
QL12p037902 Quercus lobata
QL12p037915 Quercus lobata
RcHm_v2.0_Chr6g0309441 Rosa chinensis
RcHm_v2.0_Chr6g0309451 Rosa chinensis
RcHm_v2.0_Chr6g0309461 Rosa chinensis
Rhsim07G0220800 Rhododendron simsii
Sabra14G0010700 Salix brachista
Sabra14G0010800 Salix brachista
SalBow6G3417 Salvia bowleyana
SalBow7G0276 Salvia bowleyana
SalBow8G5177 Salvia bowleyana
Sc15g0005720 Simmondsia chinensis
Sc26g0004180 Simmondsia chinensis
Sed0020869 Sechium edule
Sed0027780 Sechium edule
SEGI_08589 Sequoiadendron giganteum
SEGI_28261 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36803 Striga asiatica
SGA_v2.0_scaffold238G43965 Striga asiatica
SHI08393 Sapria himalayana
SHI08394 Sapria himalayana
SHI08396 Sapria himalayana
SHI08398 Sapria himalayana
SHI08400 Sapria himalayana
SMO143G0029 Selaginella moellendorffii
SMO347G0602 Selaginella moellendorffii
Solyc04g077930.4 Solanum lycopersicum
Solyc04g077940.4 Solanum lycopersicum
Solyc04g077950.2 Solanum lycopersicum
Sopen04g031530 Solanum pennellii
Sopen04g031540 Solanum pennellii
Sopen05g013150 Solanum pennellii
Sp1g23980 Schrenkiella parvula
Sp1g23990 Schrenkiella parvula
TAR381G0637 Trochodendron aralioides
TAR381G0870 Trochodendron aralioides
TAR381G1003 Trochodendron aralioides
TAR381G1515 Trochodendron aralioides
TAR633G2582 Trochodendron aralioides
THA.LOC104812592 Tarenaya hassleriana
THA.LOC104820515 Tarenaya hassleriana
Thecc.08G089900 Theobroma cacao
Thecc.08G090000 Theobroma cacao
Thhalv10006638m.g Eutrema salsugineum
Thhalv10006764m.g Eutrema salsugineum
TPR.G33684 Trifolium pratense
TPR.G3779 Trifolium pratense
TPR.G39981 Trifolium pratense
TPR.G656 Trifolium pratense
TWI56G1003 Tripterygium wilfordii
TWI56G1363 Tripterygium wilfordii
unitig_578.g16146 Utricularia gibba
vmacro22058 Vaccinium macrocarpon
vmacro22059 Vaccinium macrocarpon
VMungo0647G0280 Vigna mungo
VMungo1309G0716 Vigna mungo
Zm00001eb007600 Zea mays
Zm00001eb152180 Zea mays

User provided reference genes

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