Gene: COL.COLO4_28516
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_28516
- Transcript Identifier COL.rna27234
- Gene Type Coding gene
- Location AWUE01019950.1 : 37971-48541 : negative
Gene Family Information
- ID HOM05D001879
- #Genes/#Species 350/98
- Phylogenetic origin
- ID ORTHO05D007957
- #Genes/#Species 125/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna27234
- GenBank OMO70757.1
- id gene28488
- gene_name COLO4_28516
- uniprot A0A1R3HK48
Descriptions
- Description Ubiquitin system component Cue
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0043130 | IEA | GOA Database | ubiquitin binding | |
| GO:0043130 | IEA | InterPro | ubiquitin binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041800 | Activating signal cointegrator 1 complex subunit 2, CUE domain |
| IPR009060 | UBA-like superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR003892 | Ubiquitin system component CUE |
| IPR012921 | Spen paralogue and orthologue SPOC, C-terminal |
| IPR035979 | RNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |