Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33050 Brassica napus
A02p40240 Brassica napus
A02p40280 Brassica napus
A02p40290 Brassica napus
A06p08760 Brassica napus
A06p35320 Brassica napus
A09p63530 Brassica napus
Aa31LG1G1870 Aethionema arabicum
Aa31LG4G17990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5657 Anthoceros agrestis
Actinidia08700 Actinidia chinensis
Actinidia19539 Actinidia chinensis
Actinidia34272 Actinidia chinensis
Actinidia37704 Actinidia chinensis
Ah.03g136520 Amaranthus hybridus
Ah.07g204410 Amaranthus hybridus
AL1G24550 Arabidopsis lyrata
AL5G15480 Arabidopsis lyrata
AL6G36110 Arabidopsis lyrata
Aqoxy4G02477 Aquilegia oxysepala
Aqoxy5G02949 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4LT5BG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL89FD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KT7N93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6JJW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RBX16R Arachis hypogaea
AT1G12910 Arabidopsis thaliana
AT3G26640 Arabidopsis thaliana
AT5G24520 Arabidopsis thaliana
ATR0582G331 Amborella trichopoda
ATR0661G240 Amborella trichopoda
ATR0820G133 Amborella trichopoda
Atru.chr12.2441 Acer truncatum
Atru.chr12.2442 Acer truncatum
Atru.chr6.2741 Acer truncatum
Atru.chr8.1449 Acer truncatum
AUR62004940 Chenopodium quinoa
AUR62005988 Chenopodium quinoa
AUR62017460 Chenopodium quinoa
AUR62028082 Chenopodium quinoa
AUR62032528 Chenopodium quinoa
BcaB08g34241 Brassica carinata
BcaC03g17966 Brassica carinata
BcaC04g22046 Brassica carinata
BcaNung01239 Brassica carinata
BcaNung02017 Brassica carinata
BcaNung02018 Brassica carinata
BcaNung07023 Brassica carinata
BcaNung07024 Brassica carinata
BolC1t01039H Brassica oleracea
BolC1t01040H Brassica oleracea
BolC2t12080H Brassica oleracea
BolC2t12081H Brassica oleracea
BolC5t29781H Brassica oleracea
BolC7t44845H Brassica oleracea
BolC8t49835H Brassica oleracea
BolC8t52243H Brassica oleracea
BolC9t55329H Brassica oleracea
BraA01t03427Z Brassica rapa
BraA02t08997Z Brassica rapa
BraA02t08998Z Brassica rapa
BraA06t24073Z Brassica rapa
BraA06t26458Z Brassica rapa
BraA09t41704Z Brassica rapa
C01p10790 Brassica napus
C02p60240 Brassica napus
C05p10350 Brassica napus
C07p43200 Brassica napus
C07p44020 Brassica napus
C08p21990 Brassica napus
C08p47030 Brassica napus
CANSAT21G1359 Cannabis sativa
CANSAT64G2317 Cannabis sativa
CANSAT64G2623 Cannabis sativa
CARHR013240 Cardamine hirsuta
CARHR013270 Cardamine hirsuta
CARHR188910 Cardamine hirsuta
Carub.0001s1268 Capsella rubella
Carub.0005s0465 Capsella rubella
Carub.0006s2233 Capsella rubella
Ca_08240_v3 Cicer arietinum L.
Ca_16797_v3 Cicer arietinum L.
CBR_g30801 Chara braunii
Cc00_g10940 Coffea canephora
Cc00_g29750 Coffea canephora
Cc02_g00780 Coffea canephora
Cc07_g01410 Coffea canephora
CDE02G0080 Ceratophyllum demersum
CDE02G0284 Ceratophyllum demersum
CDE02G2659 Ceratophyllum demersum
CDE04G3673 Ceratophyllum demersum
CDE09G0992 Ceratophyllum demersum
CDE12G0578 Ceratophyllum demersum
Cfa007129 Carpinus fangiana
Cfa016644 Carpinus fangiana
Cfa027113 Carpinus fangiana
Ciclev10005375m.g Citrus clementina
Ciclev10013531m.g Citrus clementina
Ciclev10015815m.g Citrus clementina
CiPaw.03G000100 Carya illinoinensis
CiPaw.06G040900 Carya illinoinensis
CiPaw.09G017000 Carya illinoinensis
ClCG05G012420 Citrullus lanatus
ClCG10G008610 Citrullus lanatus
COL.COLO4_06008 Corchorus olitorius
COL.COLO4_08136 Corchorus olitorius
COL.COLO4_13412 Corchorus olitorius
COL.COLO4_14375 Corchorus olitorius
COL.COLO4_29674 Corchorus olitorius
Cpa.g.sc3.159 Carica papaya
Cre16.g674000 Chlamydomonas reinhardtii
CsaV3_3G020120 Cucumis sativus L.
CsaV3_4G008980 Cucumis sativus L.
CSS0004406 Camellia sinensis var. sinensis
CSS0042189 Camellia sinensis var. sinensis
CSS0049078 Camellia sinensis var. sinensis
DCAR_000204 Daucus carota
DCAR_014316 Daucus carota
DCAR_016686 Daucus carota
DCAR_020377 Daucus carota
Dinv17297 Davidia involucrata
Dinv25609 Davidia involucrata
Dinv29208 Davidia involucrata
Dinv33257 Davidia involucrata
Duzib068G0377 Durio zibethinus
Duzib084G0332 Durio zibethinus
Duzib093G0815 Durio zibethinus
Duzib205G0313 Durio zibethinus
Duzib212G0604 Durio zibethinus
ECA238G4071 Erigeron canadensis
ECA248G2430 Erigeron canadensis
EL10Ac3g05168 Beta vulgaris
EL10Ac6g13911 Beta vulgaris
Eucgr.A01400 Eucalyptus grandis
Eucgr.A02633 Eucalyptus grandis
Eucgr.I01562 Eucalyptus grandis
FAN01G0715 Fragaria x ananassa
FAN02G2100 Fragaria x ananassa
FAN02G2214 Fragaria x ananassa
FAN03G2906 Fragaria x ananassa
FAN05G4979 Fragaria x ananassa
FAN05G5250 Fragaria x ananassa
FAN05G5498 Fragaria x ananassa
FAN09G3975 Fragaria x ananassa
FAN09G4781 Fragaria x ananassa
FAN10G2792 Fragaria x ananassa
FAN10G3764 Fragaria x ananassa
FAN14G3497 Fragaria x ananassa
FAN14G4833 Fragaria x ananassa
FvH4_6g19450 Fragaria vesca
FvH4_6g54470 Fragaria vesca
FvH4_7g32970 Fragaria vesca
Glyma.04G228000 Glycine max
Glyma.06G136900 Glycine max
Glyma.16G044800 Glycine max
Glyma.19G106900 Glycine max
Gohir.1Z049560 Gossypium hirsutum
Gohir.A03G095400 Gossypium hirsutum
Gohir.A04G059200 Gossypium hirsutum
Gohir.A08G104600 Gossypium hirsutum
Gohir.A10G126550 Gossypium hirsutum
Gohir.D02G113700 Gossypium hirsutum
Gohir.D04G000300 Gossypium hirsutum
Gohir.D04G084500 Gossypium hirsutum
Gohir.D08G116300 Gossypium hirsutum
Gohir.D10G140100 Gossypium hirsutum
Gorai.004G125200 Gossypium raimondii
Gorai.005G129400 Gossypium raimondii
Gorai.009G399800 Gossypium raimondii
Gorai.011G155800 Gossypium raimondii
Gorai.012G001200 Gossypium raimondii
GSVIVG01032940001 Vitis vinifera
GSVIVG01033890001 Vitis vinifera
GSVIVG01038651001 Vitis vinifera
HanXRQChr02g0040811 Helianthus annuus
HanXRQChr07g0197981 Helianthus annuus
HanXRQChr11g0336491 Helianthus annuus
HanXRQChr11g0342411 Helianthus annuus
HanXRQChr11g0344051 Helianthus annuus
HanXRQChr17g0549181 Helianthus annuus
Haze_00312 Corylus avellana
Haze_14992 Corylus avellana
Haze_19650 Corylus avellana
Hma1.2p1_0415F.1_g148210 Hydrangea macrophylla
Hma1.2p1_0868F.1_g230400 Hydrangea macrophylla
HPP92_023103 Vanilla planifolia
Hund09718 Selenicereus undatus
Lalb_Chr14g0364201 Lupinus albus
Lalb_Chr23g0271951 Lupinus albus
Lalb_Chr24g0403031 Lupinus albus
Lj1g0002618 Lotus japonicus
Lj1g0024135 Lotus japonicus
Lj1g0026985 Lotus japonicus
Lj1P1028T38 Lonicera japonica
Lj2C382T12 Lonicera japonica
Lj7P285T36 Lonicera japonica
Lj9P607T48 Lonicera japonica
Lsat_1_v5_gn_1_129320 Lactuca sativa
Lsat_1_v5_gn_2_95200 Lactuca sativa
Manes.04G096000 Manihot esculenta
Manes.08G081811 Manihot esculenta
Manes.09G052400 Manihot esculenta
Manes.10G055500 Manihot esculenta
Manes.11G072300 Manihot esculenta
Mapoly0027s0005 Marchantia polymorpha
Mapoly0161s0021 Marchantia polymorpha
Mapoly0259s0004 Marchantia polymorpha
MBI11_g13140_MAGBIO Magnolia biondii
MBI11_g40921_MAGBIO Magnolia biondii
MCO14G404 Micromonas commoda
MD01G1228700 Malus domestica
MD07G1299800 Malus domestica
MD09G1000600 Malus domestica
MD09G1142200 Malus domestica
MD12G1030700 Malus domestica
MD14G1031200 Malus domestica
MD17G1003400 Malus domestica
Medtr3g092830 Medicago truncatula
Medtr3g092840 Medicago truncatula
Medtr7g084810 Medicago truncatula
MELO3C014751.2 Cucumis melo
MELO3C018988.2 Cucumis melo
Migut.F00147 Erythranthe guttata
Migut.H01347 Erythranthe guttata
Migut.M01864 Erythranthe guttata
MSTRG.16270 Avicennia marina
MSTRG.26973 Avicennia marina
MSTRG.7517 Avicennia marina
MSTRG.8607 Avicennia marina
Nitab4.5_0000319g0010 Nicotiana tabacum
Nitab4.5_0009395g0010 Nicotiana tabacum
Nitab4.5_0015003g0010 Nicotiana tabacum
Nn2g14222 Nelumbo nucifera
Nn3g16189 Nelumbo nucifera
Nn4g22052 Nelumbo nucifera
Nn7g37724 Nelumbo nucifera
Oeu008949.1 Olea europaea
Oeu040092.1 Olea europaea
Oeu061994.1 Olea europaea
Oeu062807.1 Olea europaea
Os02g0524600 Oryza sativa ssp. japonica
Os02g0682500 Oryza sativa ssp. japonica
Peaxi162Scf00827g00032 Petunia axillaris
Peaxi162Scf00912g00146 Petunia axillaris
PGR004G2092 Punica granatum
PGR042G0141 Punica granatum
PGR042G1329 Punica granatum
PGSC0003DMG400000561 Solanum tuberosum
PGSC0003DMG400009907 Solanum tuberosum
PGSC0003DMG400026477 Solanum tuberosum
PGSC0003DMG400044039 Solanum tuberosum
Phvul.001G098000 Phaseolus vulgaris
Phvul.001G192200 Phaseolus vulgaris
Phvul.009G044700 Phaseolus vulgaris
Potri.002G220500 Populus trichocarpa
Potri.006G209000 Populus trichocarpa
Potri.012G006100 Populus trichocarpa
Potri.014G140700 Populus trichocarpa
Potri.015G002600 Populus trichocarpa
Potri.016G075800 Populus trichocarpa
Pp3c19_21960 Physcomitrium patens
Pp3c19_9970 Physcomitrium patens
Pp3c21_21010 Physcomitrium patens
Pp3c22_18860 Physcomitrium patens
PRCOL_00003467 Prasinoderma coloniale
Prupe.2G319500 Prunus persica
Prupe.3G315600 Prunus persica
Prupe.7G101800 Prunus persica
Psat0s126g0120 Pisum sativum
Psat3g091680 Pisum sativum
Psat5g071720 Pisum sativum
PSO017G4193 Papaver somniferum
PSO063G2595 Papaver somniferum
PSO478G5161 Papaver somniferum
PSO782G1536 Papaver somniferum
QL02p068113 Quercus lobata
QL02p068117 Quercus lobata
QL07p038196 Quercus lobata
QL07p038205 Quercus lobata
QL09p007015 Quercus lobata
RcHm_v2.0_Chr1g0382931 Rosa chinensis
RcHm_v2.0_Chr2g0176751 Rosa chinensis
RcHm_v2.0_Chr3g0474771 Rosa chinensis
Rhsim08G0037100 Rhododendron simsii
Rhsim09G0209900 Rhododendron simsii
Sabra06G0160900 Salix brachista
Sabra12G0003600 Salix brachista
Sabra12G0008100 Salix brachista
Sabra14G0106100 Salix brachista
Sabra15G0001700 Salix brachista
SalBow6G2567 Salvia bowleyana
SalBow8G1324 Salvia bowleyana
Sc03g0005430 Simmondsia chinensis
Sc19g0000550 Simmondsia chinensis
Sed0012223 Sechium edule
Sed0024748 Sechium edule
SEGI_05077 Sequoiadendron giganteum
SEGI_09231 Sequoiadendron giganteum
SEGI_36794 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37430 Striga asiatica
SGA_v2.0_scaffold184G39990 Striga asiatica
SGA_v2.0_scaffold191G40445 Striga asiatica
SGA_v2.0_scaffold1G00220 Striga asiatica
SGA_v2.0_scaffold223G42829 Striga asiatica
SGA_v2.0_scaffold227G43211 Striga asiatica
SGA_v2.0_scaffold44G16850 Striga asiatica
SGA_v2.0_scaffold50G18471 Striga asiatica
SGA_v2.0_scaffold61G21131 Striga asiatica
SGA_v2.0_scaffold61G21224 Striga asiatica
SHI00495 Sapria himalayana
SHI34880 Sapria himalayana
SHI41362 Sapria himalayana
SMO367G0275 Selaginella moellendorffii
Solyc03g081200.3 Solanum lycopersicum
Solyc03g081210.1 Solanum lycopersicum
Solyc03g097340.1 Solanum lycopersicum
Solyc04g082470.3 Solanum lycopersicum
Sopen03g021930 Solanum pennellii
Sopen03g021940 Solanum pennellii
Sopen03g028100 Solanum pennellii
Sopen04g036080 Solanum pennellii
Sp1g11480 Schrenkiella parvula
Sp2g15760 Schrenkiella parvula
Sp2g22830 Schrenkiella parvula
TAR374G1109 Trochodendron aralioides
TAR374G1430 Trochodendron aralioides
TAR629G2325 Trochodendron aralioides
TAR636G0637 Trochodendron aralioides
THA.LOC104798988 Tarenaya hassleriana
THA.LOC104805293 Tarenaya hassleriana
Thecc.03G209300 Theobroma cacao
Thecc.04G053000 Theobroma cacao
Thecc.05G095200 Theobroma cacao
Thhalv10004515m.g Eutrema salsugineum
Thhalv10005280m.g Eutrema salsugineum
Thhalv10008091m.g Eutrema salsugineum
TPR.G20661 Trifolium pratense
TPR.G33378 Trifolium pratense
TWI23G0637 Tripterygium wilfordii
TWI32G0051 Tripterygium wilfordii
TWI34G1897 Tripterygium wilfordii
TWI39G0792 Tripterygium wilfordii
TWI74G1122 Tripterygium wilfordii
unitig_0.g2442 Utricularia gibba
vmacro10162 Vaccinium macrocarpon
vmacro22929 Vaccinium macrocarpon
VMungo1309G0260 Vigna mungo
VMungo1383G1050 Vigna mungo
VMungo1383G1741 Vigna mungo
Zm00001eb242340 Zea mays
Zm00001eb250740 Zea mays

User provided reference genes

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