Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09860 Brassica napus
A05p26380 Brassica napus
A05p27240 Brassica napus
A07p01500 Brassica napus
Aa31LG8G8070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3176 Anthoceros agrestis
Actinidia13683 Actinidia chinensis
Actinidia14842 Actinidia chinensis
Actinidia16607 Actinidia chinensis
Actinidia32100 Actinidia chinensis
Actinidia38401 Actinidia chinensis
Ah.01g022100 Amaranthus hybridus
Ah.01g022130 Amaranthus hybridus
AL3G35430 Arabidopsis lyrata
Aqoxy3G03877 Aquilegia oxysepala
Aqoxy5G00470 Aquilegia oxysepala
Aqoxy7G03934 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5H969I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D20K5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2FDBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ENMN1I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H3WDBY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N1LRBA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R322MX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TE5PEC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1UUGC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9WMHM Arachis hypogaea
AT3G21360 Arabidopsis thaliana
ATR0705G178 Amborella trichopoda
ATR1136G032 Amborella trichopoda
ATR1136G086 Amborella trichopoda
ATR1136G094 Amborella trichopoda
ATR1136G104 Amborella trichopoda
ATR1136G123 Amborella trichopoda
ATR1136G189 Amborella trichopoda
ATR1136G196 Amborella trichopoda
ATR1136G210 Amborella trichopoda
ATR1136G214 Amborella trichopoda
ATR1136G219 Amborella trichopoda
Atru.chr11.1375 Acer truncatum
Atru.chr11.1376 Acer truncatum
Atru.chr11.1377 Acer truncatum
Atru.chr11.1378 Acer truncatum
AUR62022211 Chenopodium quinoa
AUR62031925 Chenopodium quinoa
BcaB06g26234 Brassica carinata
BcaC05g28171 Brassica carinata
BolC5t32938H Brassica oleracea
BraA04t18026Z Brassica rapa
BraA05t21512Z Brassica rapa
BraA05t21613Z Brassica rapa
C05p42080 Brassica napus
C08p18970 Brassica napus
C09p61870 Brassica napus
CAN.G1143.15 Capsicum annuum
CAN.G184.75 Capsicum annuum
CANSAT56G0768 Cannabis sativa
CANSAT64G1424 Cannabis sativa
CARHR097310 Cardamine hirsuta
Carub.0003s2141 Capsella rubella
Ca_01166_v3 Cicer arietinum L.
Ca_05067_v3 Cicer arietinum L.
Cc04_g02530 Coffea canephora
Cc11_g10740 Coffea canephora
CDE05G1609 Ceratophyllum demersum
Cfa003643 Carpinus fangiana
Cfa003645 Carpinus fangiana
Cfa018646 Carpinus fangiana
Cfa018647 Carpinus fangiana
Cfa018685 Carpinus fangiana
Ciclev10025881m.g Citrus clementina
Ciclev10026083m.g Citrus clementina
Ciclev10033372m.g Citrus clementina
CiPaw.01G231200 Carya illinoinensis
CiPaw.02G145700 Carya illinoinensis
CiPaw.15G002400 Carya illinoinensis
ClCG01G005750 Citrullus lanatus
ClCG09G000230 Citrullus lanatus
COL.COLO4_07856 Corchorus olitorius
COL.COLO4_30516 Corchorus olitorius
Cpa.g.sc1.233 Carica papaya
Cpa.g.sc25.16 Carica papaya
CsaV3_5G028940 Cucumis sativus L.
CsaV3_7G035260 Cucumis sativus L.
CSS0004774 Camellia sinensis var. sinensis
CSS0020354 Camellia sinensis var. sinensis
CSS0026529 Camellia sinensis var. sinensis
CSS0041135 Camellia sinensis var. sinensis
CSS0043311 Camellia sinensis var. sinensis
DCAR_023692 Daucus carota
DCAR_026353 Daucus carota
Dinv16519 Davidia involucrata
Dinv16520 Davidia involucrata
Dinv16521 Davidia involucrata
Dinv37975 Davidia involucrata
Duzib235G0857 Durio zibethinus
Duzib248G0276 Durio zibethinus
Duzib251G0347 Durio zibethinus
ECA232G1666 Erigeron canadensis
ECA232G1795 Erigeron canadensis
ECA232G1884 Erigeron canadensis
ECA232G2480 Erigeron canadensis
ECA232G3373 Erigeron canadensis
ECA232G3703 Erigeron canadensis
ECA232G5045 Erigeron canadensis
ECA234G4751 Erigeron canadensis
ECA246G4861 Erigeron canadensis
ECA247G1336 Erigeron canadensis
ECA247G1926 Erigeron canadensis
ECA248G1773 Erigeron canadensis
ECA248G2019 Erigeron canadensis
EL10Ac9g21201 Beta vulgaris
Eucgr.B03062 Eucalyptus grandis
Eucgr.B03063 Eucalyptus grandis
Eucgr.J02936 Eucalyptus grandis
FAN02G0984 Fragaria x ananassa
FAN05G0641 Fragaria x ananassa
FAN07G0238 Fragaria x ananassa
FAN09G3289 Fragaria x ananassa
FAN12G1827 Fragaria x ananassa
FAN14G0299 Fragaria x ananassa
FAN17G2056 Fragaria x ananassa
FAN22G1034 Fragaria x ananassa
FvH4_4g28230 Fragaria vesca
FvH4_6g32420 Fragaria vesca
Glyma.01G089800 Glycine max
Glyma.02G101400 Glycine max
Glyma.15G019700 Glycine max
Gohir.A06G189700 Gossypium hirsutum
Gohir.A12G172200 Gossypium hirsutum
Gohir.D06G198100 Gossypium hirsutum
Gohir.D12G174600 Gossypium hirsutum
Gorai.008G187300 Gossypium raimondii
Gorai.010G230900 Gossypium raimondii
Gorai.010G231000 Gossypium raimondii
GSVIVG01011970001 Vitis vinifera
GSVIVG01016977001 Vitis vinifera
GSVIVG01016978001 Vitis vinifera
HanXRQChr05g0139171 Helianthus annuus
HanXRQChr05g0139181 Helianthus annuus
HanXRQChr05g0162581 Helianthus annuus
HanXRQChr08g0227201 Helianthus annuus
HanXRQChr09g0275611 Helianthus annuus
HanXRQChr09g0275621 Helianthus annuus
HanXRQChr09g0275631 Helianthus annuus
HanXRQChr09g0275641 Helianthus annuus
HanXRQChr09g0275651 Helianthus annuus
HanXRQChr09g0276271 Helianthus annuus
HanXRQChr10g0280781 Helianthus annuus
HanXRQChr10g0280841 Helianthus annuus
HanXRQChr10g0280871 Helianthus annuus
HanXRQChr15g0472091 Helianthus annuus
HanXRQChr15g0476021 Helianthus annuus
Haze_15851 Corylus avellana
Haze_17422 Corylus avellana
Haze_17423 Corylus avellana
Hma1.2p1_0430F.1_g151380 Hydrangea macrophylla
Hma1.2p1_0605F.1_g187840 Hydrangea macrophylla
Hma1.2p1_1207F.1_g267023 Hydrangea macrophylla
Hma1.2p1_1207F.1_g267026 Hydrangea macrophylla
HPP92_003620 Vanilla planifolia
HPP92_004471 Vanilla planifolia
HPP92_004472 Vanilla planifolia
HPP92_004473 Vanilla planifolia
HPP92_004474 Vanilla planifolia
HPP92_004482 Vanilla planifolia
HPP92_004483 Vanilla planifolia
HPP92_004484 Vanilla planifolia
HPP92_005416 Vanilla planifolia
Hund00695 Selenicereus undatus
Lalb_Chr22g0351561 Lupinus albus
Lj2g0012278 Lotus japonicus
Lj3A1021T35 Lonicera japonica
Lj3g0017675 Lotus japonicus
Lj9A513G54 Lonicera japonica
Lsat_1_v5_gn_0_20960 Lactuca sativa
Lsat_1_v5_gn_1_118801 Lactuca sativa
Lsat_1_v5_gn_1_119000 Lactuca sativa
Lsat_1_v5_gn_1_119060 Lactuca sativa
Lsat_1_v5_gn_1_36780 Lactuca sativa
Lsat_1_v5_gn_3_57321 Lactuca sativa
Lsat_1_v5_gn_3_57360 Lactuca sativa
Lsat_1_v5_gn_4_87081 Lactuca sativa
Lsat_1_v5_gn_4_97380 Lactuca sativa
Lsat_1_v5_gn_4_97640 Lactuca sativa
Lsat_1_v5_gn_4_98661 Lactuca sativa
Lsat_1_v5_gn_4_98761 Lactuca sativa
Lsat_1_v5_gn_4_98781 Lactuca sativa
Lsat_1_v5_gn_4_98941 Lactuca sativa
Lsat_1_v5_gn_4_99021 Lactuca sativa
Lsat_1_v5_gn_4_99241 Lactuca sativa
Lsat_1_v5_gn_4_99281 Lactuca sativa
Lsat_1_v5_gn_4_99301 Lactuca sativa
Manes.06G073700 Manihot esculenta
Manes.06G073800 Manihot esculenta
Manes.11G033300 Manihot esculenta
Manes.14G096400 Manihot esculenta
Mapoly0024s0085 Marchantia polymorpha
Mapoly0064s0118 Marchantia polymorpha
Mapoly0070s0057 Marchantia polymorpha
MBI04_g20308_MAGBIO Magnolia biondii
MBI04_g37503_MAGBIO Magnolia biondii
MBI06_g35219_MAGBIO Magnolia biondii
MBI06_g35221_MAGBIO Magnolia biondii
MBI06_g39484_MAGBIO Magnolia biondii
MBI06_g42849_MAGBIO Magnolia biondii
MCO10G227 Micromonas commoda
MD09G1202600 Malus domestica
MD10G1294600 Malus domestica
MD10G1294700 Malus domestica
MD13G1048200 Malus domestica
MD13G1048300 Malus domestica
MD17G1183800 Malus domestica
Medtr0021s0370 Medicago truncatula
Medtr0681s0020 Medicago truncatula
Medtr2g100850 Medicago truncatula
MELO3C005355.2 Cucumis melo
MELO3C024436.2 Cucumis melo
Migut.D01564 Erythranthe guttata
Migut.I00895 Erythranthe guttata
Migut.L01104 Erythranthe guttata
MSTRG.22637 Avicennia marina
Nitab4.5_0004705g0060 Nicotiana tabacum
Nitab4.5_0004969g0010 Nicotiana tabacum
Nitab4.5_0008646g0020 Nicotiana tabacum
Nitab4.5_0009780g0030 Nicotiana tabacum
Nn5g27565 Nelumbo nucifera
Nn6g35324 Nelumbo nucifera
Oeu017123.1 Olea europaea
Oeu024106.1 Olea europaea
Oeu026774.1 Olea europaea
Os01g0190000 Oryza sativa ssp. japonica
Os08g0383800 Oryza sativa ssp. japonica
Peaxi162Scf00038g01029 Petunia axillaris
Peaxi162Scf00367g00738 Petunia axillaris
PGR102G1579 Punica granatum
PGR102G2805 Punica granatum
PGSC0003DMG400000821 Solanum tuberosum
PGSC0003DMG400002609 Solanum tuberosum
Phvul.003G025800 Phaseolus vulgaris
Phvul.005G166000 Phaseolus vulgaris
Potri.001G190100 Populus trichocarpa
Potri.010G131200 Populus trichocarpa
Potri.010G131300 Populus trichocarpa
Pp3c15_16500 Physcomitrium patens
Prupe.1G303900 Prunus persica
Prupe.3G058800 Prunus persica
Psat0s308g0040 Pisum sativum
Psat5g295640 Pisum sativum
PSO210G1329 Papaver somniferum
PSO210G2028 Papaver somniferum
PSO210G3782 Papaver somniferum
QL01p000968 Quercus lobata
QL01p000982 Quercus lobata
QL05p019843 Quercus lobata
QL05p019867 Quercus lobata
QL05p019896 Quercus lobata
RcHm_v2.0_Chr2g0115841 Rosa chinensis
RcHm_v2.0_Chr2g0140561 Rosa chinensis
RcHm_v2.0_Chr2g0140571 Rosa chinensis
RcHm_v2.0_Chr4g0436031 Rosa chinensis
Rhsim08G0227800 Rhododendron simsii
Rhsim09G0113500 Rhododendron simsii
Rhsim09G0113700 Rhododendron simsii
Sabra01G0151700 Salix brachista
Sabra10G0100000 Salix brachista
Sabra10G0100100 Salix brachista
Sabra10G0100200 Salix brachista
Sabra17G0067300 Salix brachista
SalBow1G0023 Salvia bowleyana
SalBow1G1703 Salvia bowleyana
SalBow1G3178 Salvia bowleyana
SalBow1G5885 Salvia bowleyana
SalBow1G6692 Salvia bowleyana
SalBow2G3054 Salvia bowleyana
SalBow8G5517 Salvia bowleyana
Sc15g0001870 Simmondsia chinensis
Sed0019394 Sechium edule
Sed0020302 Sechium edule
SEGI_05826 Sequoiadendron giganteum
SEGI_06969 Sequoiadendron giganteum
SEGI_07621 Sequoiadendron giganteum
SEGI_09785 Sequoiadendron giganteum
SEGI_10179 Sequoiadendron giganteum
SEGI_14098 Sequoiadendron giganteum
SEGI_14308 Sequoiadendron giganteum
SEGI_14853 Sequoiadendron giganteum
SEGI_16411 Sequoiadendron giganteum
SEGI_16437 Sequoiadendron giganteum
SEGI_17272 Sequoiadendron giganteum
SEGI_18305 Sequoiadendron giganteum
SEGI_23127 Sequoiadendron giganteum
SEGI_23539 Sequoiadendron giganteum
SEGI_24620 Sequoiadendron giganteum
SEGI_24732 Sequoiadendron giganteum
SEGI_25628 Sequoiadendron giganteum
SEGI_25841 Sequoiadendron giganteum
SEGI_25991 Sequoiadendron giganteum
SEGI_30406 Sequoiadendron giganteum
SEGI_31636 Sequoiadendron giganteum
SEGI_33028 Sequoiadendron giganteum
SEGI_33247 Sequoiadendron giganteum
SEGI_35478 Sequoiadendron giganteum
SEGI_36061 Sequoiadendron giganteum
SEGI_37115 Sequoiadendron giganteum
SEGI_38242 Sequoiadendron giganteum
SEGI_40244 Sequoiadendron giganteum
SEGI_40880 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22527 Striga asiatica
SMO118G0386 Selaginella moellendorffii
SMO128G0017 Selaginella moellendorffii
SMO143G0039 Selaginella moellendorffii
SMO143G0067 Selaginella moellendorffii
SMO143G0211 Selaginella moellendorffii
SMO301G0080 Selaginella moellendorffii
SMO351G0199 Selaginella moellendorffii
SMO351G0264 Selaginella moellendorffii
SMO367G0671 Selaginella moellendorffii
SMO367G0819 Selaginella moellendorffii
SMO367G1157 Selaginella moellendorffii
SMO367G1169 Selaginella moellendorffii
Solyc03g121040.4 Solanum lycopersicum
Solyc05g009960.4 Solanum lycopersicum
Sopen03g039870 Solanum pennellii
Sopen05g005770 Solanum pennellii
Sp3g19420 Schrenkiella parvula
TAR376G0448 Trochodendron aralioides
TAR376G1089 Trochodendron aralioides
TAR383G0498 Trochodendron aralioides
TAR383G0540 Trochodendron aralioides
TAR383G0797 Trochodendron aralioides
TAR628G0198 Trochodendron aralioides
THA.LOC104810545 Tarenaya hassleriana
Thecc.02G362800 Theobroma cacao
Thecc.06G100300 Theobroma cacao
Thhalv10021117m.g Eutrema salsugineum
TPR.G2681 Trifolium pratense
TPR.G6535 Trifolium pratense
TWI12G1086 Tripterygium wilfordii
TWI75G0766 Tripterygium wilfordii
TWI75G1022 Tripterygium wilfordii
unitig_32.g10988 Utricularia gibba
vmacro10517 Vaccinium macrocarpon
vmacro10518 Vaccinium macrocarpon
vmacro10519 Vaccinium macrocarpon
vmacro10520 Vaccinium macrocarpon
vmacro18850 Vaccinium macrocarpon
VMungo1080G0805 Vigna mungo
VMungo1215G3053 Vigna mungo
Zm00001eb121420 Zea mays
Zm00001eb121460 Zea mays
Zm00001eb178510 Zea mays

User provided reference genes

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