Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09850 Brassica napus
A02p17580 Brassica napus
A03p50760 Brassica napus
A07p30490 Brassica napus
A07p38110 Brassica napus
A08p13350 Brassica napus
A09p29510 Brassica napus
Aa31LG4G8680 Aethionema arabicum
Aa31LG6G530 Aethionema arabicum
Aa31LG9G14880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1263 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1598 Anthoceros agrestis
Actinidia03358 Actinidia chinensis
Actinidia03512 Actinidia chinensis
Actinidia09180 Actinidia chinensis
Actinidia14789 Actinidia chinensis
Actinidia25981 Actinidia chinensis
Actinidia29418 Actinidia chinensis
Ah.05g178210 Amaranthus hybridus
Ah.12g055210 Amaranthus hybridus
AL2G31550 Arabidopsis lyrata
AL6G43160 Arabidopsis lyrata
AL7G36730 Arabidopsis lyrata
Aqoxy3G02276 Aquilegia oxysepala
Aqoxy5G02592 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E82UHN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5SMTG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M52U16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8FFM7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y85K93 Arachis hypogaea
AT1G71940 Arabidopsis thaliana
AT4G09580 Arabidopsis thaliana
AT4G17790 Arabidopsis thaliana
ATR0584G036 Amborella trichopoda
ATR0665G380 Amborella trichopoda
Atru.chr13.1775 Acer truncatum
Atru.chr6.1647 Acer truncatum
AUR62004645 Chenopodium quinoa
AUR62007308 Chenopodium quinoa
AUR62018695 Chenopodium quinoa
AUR62022691 Chenopodium quinoa
BcaB01g01405 Brassica carinata
BcaB03g14915 Brassica carinata
BcaB03g15627 Brassica carinata
BcaB03g15629 Brassica carinata
BcaC03g15313 Brassica carinata
BcaC04g20959 Brassica carinata
BcaC06g33597 Brassica carinata
BcaC08g45746 Brassica carinata
BcaC08g46633 Brassica carinata
BcaC08g46635 Brassica carinata
BcaC08g46638 Brassica carinata
BcaC08g46639 Brassica carinata
BcaC09g51602 Brassica carinata
BcaNung00057 Brassica carinata
BcaNung04030 Brassica carinata
BolC2t08973H Brassica oleracea
BolC6t38631H Brassica oleracea
BolC6t39655H Brassica oleracea
BolC7t45424H Brassica oleracea
BolC8t48519H Brassica oleracea
BolC9t56584H Brassica oleracea
BraA01t00929Z Brassica rapa
BraA02t06804Z Brassica rapa
BraA03t14165Z Brassica rapa
BraA07t30685Z Brassica rapa
BraA07t31376Z Brassica rapa
BraA08t33316Z Brassica rapa
BraA09t38521Z Brassica rapa
C01p11510 Brassica napus
C02p29230 Brassica napus
C06p35260 Brassica napus
C06p38600 Brassica napus
C06p46030 Brassica napus
C07p49140 Brassica napus
C09p37540 Brassica napus
CAN.G1522.4 Capsicum annuum
CAN.G199.13 Capsicum annuum
CAN.G298.39 Capsicum annuum
CANSAT21G1640 Cannabis sativa
CANSAT25G3276 Cannabis sativa
CARHR064770 Cardamine hirsuta
CARHR224520 Cardamine hirsuta
CARHR260450 Cardamine hirsuta
Carub.0002s1872 Capsella rubella
Carub.0006s2803 Capsella rubella
Carub.0007s2356 Capsella rubella
Ca_10616_v3 Cicer arietinum L.
Ca_25195_v3 Cicer arietinum L.
CBR_g6384 Chara braunii
Cc00_g10270 Coffea canephora
Cc08_g03120 Coffea canephora
Cc10_g10420 Coffea canephora
CDE02G2095 Ceratophyllum demersum
CDE06G1585 Ceratophyllum demersum
CDE08G0639 Ceratophyllum demersum
Cfa012473 Carpinus fangiana
Cfa013852 Carpinus fangiana
Ciclev10002092m.g Citrus clementina
CiPaw.07G159500 Carya illinoinensis
CiPaw.08G059300 Carya illinoinensis
CiPaw.11G095900 Carya illinoinensis
CiPaw.12G065900 Carya illinoinensis
ClCG09G010580 Citrullus lanatus
ClCG09G011770 Citrullus lanatus
ClCG11G008100 Citrullus lanatus
COL.COLO4_16984 Corchorus olitorius
COL.COLO4_32917 Corchorus olitorius
Cpa.g.c28481.2 Carica papaya
Cpa.g.c35821 Carica papaya
Cpa.g.c38244 Carica papaya
CsaV3_2G033510 Cucumis sativus L.
CsaV3_3G048990 Cucumis sativus L.
CsaV3_7G023760 Cucumis sativus L.
CSS0006687 Camellia sinensis var. sinensis
CSS0018962 Camellia sinensis var. sinensis
CSS0022356 Camellia sinensis var. sinensis
CSS0025300 Camellia sinensis var. sinensis
CSS0025967 Camellia sinensis var. sinensis
CSS0039526 Camellia sinensis var. sinensis
DCAR_001045 Daucus carota
DCAR_008246 Daucus carota
DCAR_032087 Daucus carota
Dinv03384 Davidia involucrata
Dinv25237 Davidia involucrata
Dinv28979 Davidia involucrata
Dinv41711 Davidia involucrata
Duzib068G0322 Durio zibethinus
Duzib084G0086 Durio zibethinus
Duzib116G0056 Durio zibethinus
Duzib177G0683 Durio zibethinus
Duzib205G1885 Durio zibethinus
ECA232G4706 Erigeron canadensis
ECA233G3740 Erigeron canadensis
ECA240G0697 Erigeron canadensis
EL10Ac1g00083 Beta vulgaris
EL10Ac5g12077 Beta vulgaris
Eucgr.D02213 Eucalyptus grandis
Eucgr.E00265 Eucalyptus grandis
Eucgr.F02614 Eucalyptus grandis
FAN04G2866 Fragaria x ananassa
FAN08G2395 Fragaria x ananassa
FAN13G1613 Fragaria x ananassa
FAN15G0182 Fragaria x ananassa
FAN18G3392 Fragaria x ananassa
FAN18G4409 Fragaria x ananassa
FAN20G2461 Fragaria x ananassa
FAN24G0574 Fragaria x ananassa
FAN24G2617 Fragaria x ananassa
FAN27G1099 Fragaria x ananassa
FvH4_2g11950 Fragaria vesca
FvH4_2g12000 Fragaria vesca
FvH4_5g22470 Fragaria vesca
Glyma.01G016800 Glycine max
Glyma.09G206000 Glycine max
Glyma.10G216600 Glycine max
Glyma.20G175400 Glycine max
Gohir.A02G060200 Gossypium hirsutum
Gohir.A03G000050 Gossypium hirsutum
Gohir.A08G155400 Gossypium hirsutum
Gohir.A09G199600 Gossypium hirsutum
Gohir.D02G065700 Gossypium hirsutum
Gohir.D03G172900 Gossypium hirsutum
Gohir.D08G176000 Gossypium hirsutum
Gohir.D09G193900 Gossypium hirsutum
Gorai.003G183600 Gossypium raimondii
Gorai.004G183800 Gossypium raimondii
Gorai.005G074400 Gossypium raimondii
Gorai.006G217400 Gossypium raimondii
GSVIVG01013129001 Vitis vinifera
GSVIVG01034486001 Vitis vinifera
HanXRQChr03g0083591 Helianthus annuus
HanXRQChr04g0107541 Helianthus annuus
HanXRQChr09g0262631 Helianthus annuus
HanXRQChr11g0326081 Helianthus annuus
HanXRQChr13g0395431 Helianthus annuus
HanXRQChr13g0414211 Helianthus annuus
Haze_08189 Corylus avellana
Haze_22525 Corylus avellana
Haze_22540 Corylus avellana
Hma1.2p1_0162F.1_g072240 Hydrangea macrophylla
Hma1.2p1_0303F.1_g118890 Hydrangea macrophylla
HPP92_014660 Vanilla planifolia
HPP92_019220 Vanilla planifolia
HPP92_027698 Vanilla planifolia
HPP92_027705 Vanilla planifolia
Hund01038 Selenicereus undatus
Hund11223 Selenicereus undatus
Hund14349 Selenicereus undatus
Hund16799 Selenicereus undatus
Hund18292 Selenicereus undatus
Hund27086 Selenicereus undatus
Hund30966 Selenicereus undatus
Lalb_Chr02g0141811 Lupinus albus
Lalb_Chr03g0036171 Lupinus albus
Lalb_Chr05g0215891 Lupinus albus
Lalb_Chr06g0162051 Lupinus albus
Lalb_Chr16g0381231 Lupinus albus
Lalb_Chr19g0129421 Lupinus albus
Lalb_Chr21g0305801 Lupinus albus
Lj2g0005058 Lotus japonicus
Lj4A497G45 Lonicera japonica
Lj4A502G47 Lonicera japonica
Lj5g0004468 Lotus japonicus
Lj7C290T0 Lonicera japonica
Lj7P290T34 Lonicera japonica
Lj8A305G43 Lonicera japonica
Lsat_1_v5_gn_1_9980 Lactuca sativa
Lsat_1_v5_gn_3_18900 Lactuca sativa
Lsat_1_v5_gn_4_135961 Lactuca sativa
Lsat_1_v5_gn_6_3960 Lactuca sativa
Lsat_1_v5_gn_6_80261 Lactuca sativa
Manes.02G192000 Manihot esculenta
Manes.15G192980 Manihot esculenta
Manes.17G014400 Manihot esculenta
Manes.18G100900 Manihot esculenta
Mapoly0001s0510 Marchantia polymorpha
Mapoly0031s0177 Marchantia polymorpha
Mapoly0031s0181 Marchantia polymorpha
MBI04_g20347_MAGBIO Magnolia biondii
MBI09_g01932_MAGBIO Magnolia biondii
MBI09_g40925_MAGBIO Magnolia biondii
MD05G1041900 Malus domestica
MD06G1037100 Malus domestica
MD10G1048400 Malus domestica
MD16G1272300 Malus domestica
Medtr1g096450 Medicago truncatula
Medtr5g029890 Medicago truncatula
MELO3C003425.2 Cucumis melo
MELO3C008124.2 Cucumis melo
MELO3C024120.2 Cucumis melo
Migut.C01253 Erythranthe guttata
Migut.E00785 Erythranthe guttata
Migut.N03348 Erythranthe guttata
MSTRG.13749 Avicennia marina
MSTRG.22448 Avicennia marina
Nitab4.5_0000303g0120 Nicotiana tabacum
Nitab4.5_0000353g0120 Nicotiana tabacum
Nitab4.5_0000807g0040 Nicotiana tabacum
Nitab4.5_0001018g0010 Nicotiana tabacum
Nitab4.5_0002203g0020 Nicotiana tabacum
Nitab4.5_0002500g0050 Nicotiana tabacum
Nn1g00146 Nelumbo nucifera
Nn3g19445 Nelumbo nucifera
Nn5g27695 Nelumbo nucifera
Oeu021015.2 Olea europaea
Oeu028880.1 Olea europaea
Oeu029935.1 Olea europaea
Oeu030000.1 Olea europaea
Oeu039615.1 Olea europaea
Oeu052901.1 Olea europaea
Os02g0693500 Oryza sativa ssp. japonica
Os03g0703900 Oryza sativa ssp. japonica
Os04g0592600 Oryza sativa ssp. japonica
Peaxi162Scf00170g01231 Petunia axillaris
Peaxi162Scf00268g01133 Petunia axillaris
Peaxi162Scf00534g00053 Petunia axillaris
Peaxi162Scf00560g00733 Petunia axillaris
PGR031G3301 Punica granatum
PGR042G3591 Punica granatum
PGSC0003DMG400000881 Solanum tuberosum
PGSC0003DMG400017528 Solanum tuberosum
PGSC0003DMG400026114 Solanum tuberosum
Phvul.002G139800 Phaseolus vulgaris
Phvul.007G089500 Phaseolus vulgaris
Potri.001G140200 Populus trichocarpa
Potri.003G094000 Populus trichocarpa
Potri.013G113000 Populus trichocarpa
Potri.019G083500 Populus trichocarpa
Pp3c16_5420 Physcomitrium patens
Pp3c27_2420 Physcomitrium patens
Pp3c5_9530 Physcomitrium patens
PRCOL_00001717 Prasinoderma coloniale
Prupe.3G067000 Prunus persica
Prupe.5G032200 Prunus persica
Prupe.6G151100 Prunus persica
Prupe.8G057800 Prunus persica
Psat2g137280 Pisum sativum
Psat6g187520 Pisum sativum
PSO017G5622 Papaver somniferum
PSO017G5955 Papaver somniferum
PSO063G6985 Papaver somniferum
PSO478G1791 Papaver somniferum
QL02p033799 Quercus lobata
QL12p004704 Quercus lobata
RcHm_v2.0_Chr1g0333971 Rosa chinensis
RcHm_v2.0_Chr6g0272001 Rosa chinensis
RcHm_v2.0_Chr7g0210261 Rosa chinensis
Rhsim07G0129800 Rhododendron simsii
Rhsim11G0058700 Rhododendron simsii
Sabra01G0109100 Salix brachista
Sabra03G0063100 Salix brachista
Sabra13G0095900 Salix brachista
Sabra19G0094900 Salix brachista
SalBow6G3973 Salvia bowleyana
SalBow7G2016 Salvia bowleyana
Sc22g0001590 Simmondsia chinensis
Sc23g0001240 Simmondsia chinensis
Sed0000100 Sechium edule
Sed0001822 Sechium edule
Sed0003718 Sechium edule
Sed0005698 Sechium edule
Sed0012961 Sechium edule
SEGI_12492 Sequoiadendron giganteum
SEGI_15843 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32475 Striga asiatica
SGA_v2.0_scaffold149G36587 Striga asiatica
SGA_v2.0_scaffold149G36596 Striga asiatica
SGA_v2.0_scaffold24G10553 Striga asiatica
SGA_v2.0_scaffold25G11070 Striga asiatica
SGA_v2.0_scaffold2815G54214 Striga asiatica
SGA_v2.0_scaffold322G48625 Striga asiatica
SGA_v2.0_scaffold3794G54395 Striga asiatica
SGA_v2.0_scaffold386G50494 Striga asiatica
SMO118G0527 Selaginella moellendorffii
SMO339G0070 Selaginella moellendorffii
Solyc06g065400.3 Solanum lycopersicum
Solyc08g076670.3 Solanum lycopersicum
Solyc11g018620.3 Solanum lycopersicum
Sopen06g023880 Solanum pennellii
Sopen08g025220 Solanum pennellii
Sopen11g009590 Solanum pennellii
Sp5g27010 Schrenkiella parvula
Sp6g08030 Schrenkiella parvula
Sp7g16310 Schrenkiella parvula
TAR375G0171 Trochodendron aralioides
TAR381G1445 Trochodendron aralioides
TAR628G1668 Trochodendron aralioides
TAR629G1441 Trochodendron aralioides
THA.LOC104798331 Tarenaya hassleriana
THA.LOC104806698 Tarenaya hassleriana
THA.LOC104810547 Tarenaya hassleriana
THA.LOC104816319 Tarenaya hassleriana
Thecc.03G305900 Theobroma cacao
Thecc.08G183600 Theobroma cacao
Thhalv10018999m.g Eutrema salsugineum
Thhalv10026024m.g Eutrema salsugineum
Thhalv10028857m.g Eutrema salsugineum
TPR.G22209 Trifolium pratense
TPR.G36264 Trifolium pratense
TPR.G8083 Trifolium pratense
TPR.G8823 Trifolium pratense
TWI15G1192 Tripterygium wilfordii
TWI32G0603 Tripterygium wilfordii
TWI60G0528 Tripterygium wilfordii
TWI60G1005 Tripterygium wilfordii
unitig_0.g917 Utricularia gibba
unitig_21.g20895 Utricularia gibba
unitig_744.g24307 Utricularia gibba
vmacro00763 Vaccinium macrocarpon
vmacro14184 Vaccinium macrocarpon
VMungo0720G0103 Vigna mungo
VMungo1215G3454 Vigna mungo
Zm00001eb054370 Zea mays
Zm00001eb072290 Zea mays
Zm00001eb251300 Zea mays
Zm00001eb429920 Zea mays

User provided reference genes

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