Gene: AT1G71940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G71940
  • Transcript Identifier AT1G71940.2
  • Gene Type Coding gene
  • Location Chr1 : 27078781-27080191 : positive

Gene Family Information

  • ID HOM05D001833
  • #Genes/#Species 357/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G71940.2
  • uniprot Q9C8W8

Descriptions

  • Description SNARE associated Golgi protein family
  • Computational description SNARE associated Golgi protein family; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G09580.1); Has 3415 Blast hits to 3415 proteins in 852 species: Archae - 8; Bacteria - 1954; Metazoa - 223; Fungi - 33; Plants - 255; Viruses - 0; Other Eukaryotes - 942 (source: NCBI BLink).
  • Computational description SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G09580.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
HDA
Gene OntologyGolgi apparatus1
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032816 SNARE associated Golgi protein
IPR045014 Transmembrane protein 41A/B
Mapman id Description
35.1 not assigned.annotated