Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06190 Brassica napus
A01p06200 Brassica napus
A01p06210 Brassica napus
A01p06720 Brassica napus
A01p06730 Brassica napus
A01p06740 Brassica napus
A02p29300 Brassica napus
A02p29320 Brassica napus
A02p29330 Brassica napus
A03p61240 Brassica napus
A06p46400 Brassica napus
Aa31LG2G17850 Aethionema arabicum
Aa31LG2G17870 Aethionema arabicum
Actinidia22324 Actinidia chinensis
AL7G19750 Arabidopsis lyrata
AL7G19780 Arabidopsis lyrata
AL7G19790 Arabidopsis lyrata
AL7G19800 Arabidopsis lyrata
AL7G19810 Arabidopsis lyrata
Aqoxy4G00786 Aquilegia oxysepala
Aqoxy5G03160 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07A84U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.27HQCZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2D36J9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.36N5BX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62PV47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VW32B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W5KIC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DUNV2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0VXY6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1WXPY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9XFHY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IFW6MY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3P3AQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWA25E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XI4PYL Arachis hypogaea
AT4G32090 Arabidopsis thaliana
AT4G32100 Arabidopsis thaliana
AT4G32105 Arabidopsis thaliana
AT4G32110 Arabidopsis thaliana
ATR0582G117 Amborella trichopoda
ATR0582G157 Amborella trichopoda
ATR0582G316 Amborella trichopoda
ATR0582G378 Amborella trichopoda
Atru.chr12.564 Acer truncatum
Atru.chr6.250 Acer truncatum
Atru.chr7.2470 Acer truncatum
Atru.chr7.2473 Acer truncatum
Atru.chr7.2474 Acer truncatum
Atru.chr7.2476 Acer truncatum
AUR62012432 Chenopodium quinoa
AUR62029426 Chenopodium quinoa
BcaB03g11963 Brassica carinata
BcaB07g30432 Brassica carinata
BcaB07g30433 Brassica carinata
BcaC03g16784 Brassica carinata
BcaC03g16785 Brassica carinata
BcaC06g31519 Brassica carinata
BcaC06g34407 Brassica carinata
BcaC09g51932 Brassica carinata
BcaC09g51998 Brassica carinata
BcaNung03137 Brassica carinata
BcaNung03138 Brassica carinata
BolC1t00680H Brassica oleracea
BolC1t00681H Brassica oleracea
BolC1t00731H Brassica oleracea
BolC2t10708H Brassica oleracea
BolC7t43441H Brassica oleracea
BolC7t46357H Brassica oleracea
BraA01t00587Z Brassica rapa
BraA01t00588Z Brassica rapa
BraA01t00629Z Brassica rapa
BraA02t07960Z Brassica rapa
BraA03t15168Z Brassica rapa
BraA06t27504Z Brassica rapa
C01p06830 Brassica napus
C01p06840 Brassica napus
C01p06850 Brassica napus
C01p07480 Brassica napus
C01p07490 Brassica napus
C01p07500 Brassica napus
C02p46550 Brassica napus
C02p46580 Brassica napus
C02p46590 Brassica napus
C07p29020 Brassica napus
C07p59090 Brassica napus
CAN.G111.7 Capsicum annuum
CANSAT25G3871 Cannabis sativa
CARHR239990 Cardamine hirsuta
CARHR240000 Cardamine hirsuta
CARHR240010 Cardamine hirsuta
CARHR240020 Cardamine hirsuta
Carub.0007s0845 Capsella rubella
Carub.0007s0846 Capsella rubella
Carub.0007s0847 Capsella rubella
Ca_03322_v3 Cicer arietinum L.
CDE02G0050 Ceratophyllum demersum
CDE05G3187 Ceratophyllum demersum
CDE06G0004 Ceratophyllum demersum
Ciclev10009917m.g Citrus clementina
Ciclev10010457m.g Citrus clementina
CiPaw.08G009300 Carya illinoinensis
ClCG05G016680 Citrullus lanatus
ClCG05G016690 Citrullus lanatus
COL.COLO4_18892 Corchorus olitorius
Cpa.g.sc187.6 Carica papaya
CsaV3_3G046170 Cucumis sativus L.
CsaV3_3G046190 Cucumis sativus L.
CsaV3_6G045660 Cucumis sativus L.
DCAR_004364 Daucus carota
DCAR_015990 Daucus carota
Dinv24980 Davidia involucrata
Dinv26451 Davidia involucrata
Duzib052G0237 Durio zibethinus
Duzib150G1023 Durio zibethinus
Duzib168G0445 Durio zibethinus
ECA246G0220 Erigeron canadensis
EL10Ac2g04174 Beta vulgaris
EL10Ac6g15442 Beta vulgaris
Eucgr.C01626 Eucalyptus grandis
Eucgr.C01709 Eucalyptus grandis
Eucgr.C02739 Eucalyptus grandis
Eucgr.L02576 Eucalyptus grandis
FAN04G1340 Fragaria x ananassa
FAN04G2963 Fragaria x ananassa
FAN08G2754 Fragaria x ananassa
FAN18G1420 Fragaria x ananassa
FAN18G2855 Fragaria x ananassa
FAN24G1383 Fragaria x ananassa
FAN24G1684 Fragaria x ananassa
FAN24G2268 Fragaria x ananassa
FAN24G2789 Fragaria x ananassa
FAN24G3294 Fragaria x ananassa
FAN27G0609 Fragaria x ananassa
FAN27G2147 Fragaria x ananassa
FAN27G2153 Fragaria x ananassa
FvH4_2g27480 Fragaria vesca
FvH4_2g28680 Fragaria vesca
FvH4_2g28690 Fragaria vesca
FvH4_2g28701 Fragaria vesca
FvH4_2g28710 Fragaria vesca
FvH4_2g28712 Fragaria vesca
FvH4_5g03660 Fragaria vesca
FvH4_5g25410 Fragaria vesca
Glyma.05G150900 Glycine max
Glyma.07G189600 Glycine max
Glyma.08G316300 Glycine max
Glyma.08G357100 Glycine max
Glyma.09G085400 Glycine max
Glyma.10G113700 Glycine max
Glyma.10G113900 Glycine max
Glyma.10G114100 Glycine max
Glyma.10G186200 Glycine max
Glyma.10G271300 Glycine max
Glyma.13G199700 Glycine max
Glyma.17G218100 Glycine max
Glyma.18G175601 Glycine max
Glyma.18G276100 Glycine max
Glyma.20G204300 Glycine max
Gohir.A07G029700 Gossypium hirsutum
Gohir.A13G061900 Gossypium hirsutum
Gohir.D07G033550 Gossypium hirsutum
Gohir.D13G060100 Gossypium hirsutum
Gorai.013G068000 Gossypium raimondii
HanXRQChr03g0079111 Helianthus annuus
HanXRQChr12g0373391 Helianthus annuus
HanXRQChr13g0400031 Helianthus annuus
HanXRQChr16g0511881 Helianthus annuus
Haze_21485 Corylus avellana
Haze_21486 Corylus avellana
HPP92_015931 Vanilla planifolia
HPP92_021690 Vanilla planifolia
HPP92_021691 Vanilla planifolia
HPP92_021711 Vanilla planifolia
HPP92_021712 Vanilla planifolia
Lalb_Chr03g0036441 Lupinus albus
Lalb_Chr07g0186891 Lupinus albus
Lalb_Chr07g0186901 Lupinus albus
Lalb_Chr12g0205711 Lupinus albus
Lalb_Chr12g0205721 Lupinus albus
Lalb_Chr13g0294691 Lupinus albus
Lalb_Chr13g0294711 Lupinus albus
Lalb_Chr13g0294721 Lupinus albus
Lalb_Chr17g0336761 Lupinus albus
Lalb_Chr21g0316211 Lupinus albus
Lalb_Chr21g0316231 Lupinus albus
Lj3g0023162 Lotus japonicus
Lj4g0004287 Lotus japonicus
Lj4g0011737 Lotus japonicus
Lj4g0014854 Lotus japonicus
Lj4g0019656 Lotus japonicus
Lj4g0020170 Lotus japonicus
Lj4g0027202 Lotus japonicus
Lj5g0009014 Lotus japonicus
Lj6g0004190 Lotus japonicus
Lj6g0012802 Lotus japonicus
Lj6g0014356 Lotus japonicus
Lj7E726T0 Lonicera japonica
Lsat_1_v5_gn_1_106201 Lactuca sativa
Lsat_1_v5_gn_6_115761 Lactuca sativa
Lsat_1_v5_gn_6_115781 Lactuca sativa
Lsat_1_v5_gn_6_115820 Lactuca sativa
Lsat_1_v5_gn_6_27980 Lactuca sativa
Lsat_1_v5_gn_6_28121 Lactuca sativa
Manes.02G218600 Manihot esculenta
Manes.16G124600 Manihot esculenta
MBI07_g01997_MAGBIO Magnolia biondii
MBI07_g02003_MAGBIO Magnolia biondii
MBI07_g02004_MAGBIO Magnolia biondii
MBI18_g29804_MAGBIO Magnolia biondii
MD08G1079500 Malus domestica
MD08G1151500 Malus domestica
MD15G1128800 Malus domestica
MD15G1128900 Malus domestica
Medtr0100s0140 Medicago truncatula
Medtr1g040785 Medicago truncatula
Medtr1g040815 Medicago truncatula
Medtr1g040845 Medicago truncatula
Medtr1g048300 Medicago truncatula
Medtr1g049240 Medicago truncatula
Medtr2g063010 Medicago truncatula
Medtr2g438190 Medicago truncatula
Medtr5g042350 Medicago truncatula
Medtr6g445140 Medicago truncatula
Medtr8g042530 Medicago truncatula
MELO3C003721.2 Cucumis melo
MELO3C033004.2 Cucumis melo
MSTRG.25250 Avicennia marina
Os02g0511600 Oryza sativa ssp. japonica
Os11g0222800 Oryza sativa ssp. japonica
Os11g0224200 Oryza sativa ssp. japonica
Os11g0224301 Oryza sativa ssp. japonica
PGR044G0606 Punica granatum
PGSC0003DMG400004421 Solanum tuberosum
Phvul.001G045800 Phaseolus vulgaris
Phvul.002G171300 Phaseolus vulgaris
Phvul.004G057100 Phaseolus vulgaris
Phvul.006G043500 Phaseolus vulgaris
Phvul.007G030200 Phaseolus vulgaris
Phvul.007G030500 Phaseolus vulgaris
Phvul.007G239600 Phaseolus vulgaris
Phvul.008G024700 Phaseolus vulgaris
Phvul.009G216600 Phaseolus vulgaris
Phvul.009G216700 Phaseolus vulgaris
Phvul.010G051700 Phaseolus vulgaris
Potri.004G167900 Populus trichocarpa
Potri.006G257600 Populus trichocarpa
Potri.009G129400 Populus trichocarpa
Prupe.1G484000 Prunus persica
Prupe.1G484100 Prunus persica
Prupe.1G484200 Prunus persica
Psat0s2453g0040 Pisum sativum
Psat0s2453g0080 Pisum sativum
Psat0s2453g0120 Pisum sativum
Psat0s2453g0200 Pisum sativum
Psat0s2453g0240 Pisum sativum
Psat0s3990g0120 Pisum sativum
Psat1g016120 Pisum sativum
Psat3g204760 Pisum sativum
Psat6g048880 Pisum sativum
PSO478G3089 Papaver somniferum
PSO478G4527 Papaver somniferum
PSO541G0501 Papaver somniferum
PSO541G2996 Papaver somniferum
PSO541G3291 Papaver somniferum
PSO675G0727 Papaver somniferum
PSO675G1843 Papaver somniferum
PSO675G1869 Papaver somniferum
QL02p021022 Quercus lobata
QL07p000821 Quercus lobata
QL07p000848 Quercus lobata
QL07p000880 Quercus lobata
QL12p013627 Quercus lobata
QL12p013638 Quercus lobata
RcHm_v2.0_Chr6g0286461 Rosa chinensis
RcHm_v2.0_Chr6g0297451 Rosa chinensis
RcHm_v2.0_Chr6g0297461 Rosa chinensis
RcHm_v2.0_Chr6g0297491 Rosa chinensis
Rhsim04G0089500 Rhododendron simsii
Rhsim04G0091300 Rhododendron simsii
Rhsim04G0092100 Rhododendron simsii
Rhsim04G0092600 Rhododendron simsii
Sabra06G0201500 Salix brachista
Sabra09G0098900 Salix brachista
SalBow6G4108 Salvia bowleyana
Sc03g0006280 Simmondsia chinensis
Sc03g0006290 Simmondsia chinensis
Sc06g0000520 Simmondsia chinensis
Sc23g0006630 Simmondsia chinensis
Sed0003642 Sechium edule
Sed0003760 Sechium edule
Sed0010450 Sechium edule
Sed0012505 Sechium edule
Sed0018471 Sechium edule
Sed0025130 Sechium edule
SGA_v2.0_scaffold116G32303 Striga asiatica
SGA_v2.0_scaffold71G23793 Striga asiatica
SGA_v2.0_scaffold71G23794 Striga asiatica
Solyc10g054673.1 Solanum lycopersicum
Solyc10g054677.1 Solanum lycopersicum
Sopen10g024540 Solanum pennellii
Sopen10g024580 Solanum pennellii
Sp2g10630 Schrenkiella parvula
Sp2g10650 Schrenkiella parvula
Sp2g10660 Schrenkiella parvula
Sp7g29890 Schrenkiella parvula
Sp7g29900 Schrenkiella parvula
SpUn0983_0010 Schrenkiella parvula
SpUn0983_0020 Schrenkiella parvula
TAR371G0865 Trochodendron aralioides
TAR622G0422 Trochodendron aralioides
TAR622G0534 Trochodendron aralioides
TAR622G1058 Trochodendron aralioides
TAR629G0897 Trochodendron aralioides
TAR629G2934 Trochodendron aralioides
THA.LOC104803439 Tarenaya hassleriana
THA.LOC104818604 Tarenaya hassleriana
THA.LOC104818605 Tarenaya hassleriana
THA.LOC104818607 Tarenaya hassleriana
THA.LOC104818610 Tarenaya hassleriana
THA.LOC104818611 Tarenaya hassleriana
Thecc.02G154500 Theobroma cacao
Thecc.02G154600 Theobroma cacao
Thecc.09G021200 Theobroma cacao
Thhalv10001075m.g Eutrema salsugineum
Thhalv10001150m.g Eutrema salsugineum
Thhalv10009797m.g Eutrema salsugineum
Thhalv10026845m.g Eutrema salsugineum
Thhalv10027525m.g Eutrema salsugineum
Thhalv10027554m.g Eutrema salsugineum
TPR.G19813 Trifolium pratense
TPR.G19820 Trifolium pratense
TPR.G3270 Trifolium pratense
TPR.G35350 Trifolium pratense
TPR.G35354 Trifolium pratense
TPR.G35694 Trifolium pratense
TPR.G3595 Trifolium pratense
TPR.G3968 Trifolium pratense
TPR.G3970 Trifolium pratense
TPR.G8 Trifolium pratense
TPR.G9069 Trifolium pratense
TWI34G0730 Tripterygium wilfordii
TWI34G0812 Tripterygium wilfordii
TWI63G0410 Tripterygium wilfordii
TWI63G1514 Tripterygium wilfordii
VMungo0331G0458 Vigna mungo
VMungo0331G0739 Vigna mungo
VMungo0464G0399 Vigna mungo
VMungo0464G1322 Vigna mungo
VMungo0464G1777 Vigna mungo
VMungo0540G2413 Vigna mungo
VMungo0720G0118 Vigna mungo
VMungo0720G1259 Vigna mungo
VMungo0720G3158 Vigna mungo
Zm00001eb085230 Zea mays
Zm00001eb170490 Zea mays
Zm00001eb170500 Zea mays
Zm00001eb307030 Zea mays
Zm00001eb421200 Zea mays

User provided reference genes

Program Settings