Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19180 Brassica napus
A01p42270 Brassica napus
A01p42280 Brassica napus
A05p39490 Brassica napus
A06p48210 Brassica napus
A09p20030 Brassica napus
Aa31LG3G2010 Aethionema arabicum
Aa31LG9G12930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2783 Anthoceros agrestis
Actinidia11238 Actinidia chinensis
Actinidia19738 Actinidia chinensis
Actinidia22621 Actinidia chinensis
Actinidia23269 Actinidia chinensis
Actinidia26531 Actinidia chinensis
Ah.08g212160 Amaranthus hybridus
Ah.11g043300 Amaranthus hybridus
Ah.15g091780 Amaranthus hybridus
AL3G20730 Arabidopsis lyrata
AL8G18080 Arabidopsis lyrata
Aqoxy4G03078 Aquilegia oxysepala
Aqoxy6G01351 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.069QKB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.06X6UX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.53JHUG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5RL6NX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9A7I0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D79Q71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DL9HNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2AMHL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MU5RY8 Arachis hypogaea
AT3G09560 Arabidopsis thaliana
AT5G42870 Arabidopsis thaliana
ATR0100G035 Amborella trichopoda
ATR0144G015 Amborella trichopoda
ATR0759G030 Amborella trichopoda
Atru.chr13.657_Atru.chr13.658 Acer truncatum
Atru.chr8.2498 Acer truncatum
AUR62022413 Chenopodium quinoa
AUR62040997 Chenopodium quinoa
AUR62042171 Chenopodium quinoa
AUR62042288 Chenopodium quinoa
BcaB07g31039 Brassica carinata
BcaC02g10798 Brassica carinata
BcaC02g10799 Brassica carinata
BcaC04g21965 Brassica carinata
BcaC05g29684 Brassica carinata
BcaC06g31743 Brassica carinata
BcaC09g48030 Brassica carinata
BcaC09g48086 Brassica carinata
BolC1t05447H Brassica oleracea
BolC4t24002H Brassica oleracea
BolC5t34502H Brassica oleracea
BolC9t55440H Brassica oleracea
BraA01t01860Z Brassica rapa
BraA01t04295Z Brassica rapa
BraA05t22730Z Brassica rapa
BraA06t27690Z Brassica rapa
BraA07t28767Z Brassica rapa
BraA09t37612Z Brassica rapa
C02p17990 Brassica napus
C04p25010 Brassica napus
C04p25020 Brassica napus
C05p58510 Brassica napus
C07p10400 Brassica napus
C09p25410 Brassica napus
CAN.G1117.5 Capsicum annuum
CAN.G1460.3 Capsicum annuum
CAN.G1460.4 Capsicum annuum
CAN.G350.16 Capsicum annuum
CAN.G371.29 Capsicum annuum
CANSAT11G1610 Cannabis sativa
CANSAT56G3923 Cannabis sativa
CARHR083970 Cardamine hirsuta
CARHR181270 Cardamine hirsuta
Carub.0003s0865 Capsella rubella
Carub.0008s0604 Capsella rubella
Ca_08801_v3 Cicer arietinum L.
Ca_09589_v3 Cicer arietinum L.
Ca_13298_v3 Cicer arietinum L.
Ca_15959_v3 Cicer arietinum L.
Ca_30567_v3 Cicer arietinum L.
CBR_g1025 Chara braunii
Cc06_g03200 Coffea canephora
Cc10_g04240 Coffea canephora
Cc10_g04250 Coffea canephora
CDE02G2595 Ceratophyllum demersum
CDE09G0214 Ceratophyllum demersum
CDE09G1168 Ceratophyllum demersum
CDE10G0095 Ceratophyllum demersum
CDE10G0277 Ceratophyllum demersum
Cfa017457 Carpinus fangiana
Cfa023080 Carpinus fangiana
Ciclev10000118m.g Citrus clementina
Ciclev10011320m.g Citrus clementina
Ciclev10013906m.g Citrus clementina
CiPaw.10G140600 Carya illinoinensis
CiPaw.15G060900 Carya illinoinensis
ClCG04G008610 Citrullus lanatus
ClCG08G015780 Citrullus lanatus
ClCG10G020780 Citrullus lanatus
ClCG10G020810 Citrullus lanatus
COL.COLO4_07090 Corchorus olitorius
COL.COLO4_26484 Corchorus olitorius
Cpa.g.sc114.16 Carica papaya
Cpa.g.sc49.6 Carica papaya
Cre12.g506600 Chlamydomonas reinhardtii
CsaV3_2G027980 Cucumis sativus L.
CsaV3_3G035210 Cucumis sativus L.
CsaV3_4G024550 Cucumis sativus L.
CSS0003740 Camellia sinensis var. sinensis
CSS0010539 Camellia sinensis var. sinensis
CSS0013749 Camellia sinensis var. sinensis
CSS0047445 Camellia sinensis var. sinensis
DCAR_008790 Daucus carota
DCAR_012770 Daucus carota
DCAR_020863 Daucus carota
Dinv35667 Davidia involucrata
Dinv35668 Davidia involucrata
Dinv35968 Davidia involucrata
Dinv37225 Davidia involucrata
Dinv39323 Davidia involucrata
Duzib093G1595 Durio zibethinus
Duzib106G0031 Durio zibethinus
Duzib116G0555 Durio zibethinus
ECA232G3129 Erigeron canadensis
ECA247G0845 Erigeron canadensis
EL10Ac1g01728 Beta vulgaris
EL10Ac7g17281 Beta vulgaris
Eucgr.A01214 Eucalyptus grandis
Eucgr.F00236 Eucalyptus grandis
FAN02G1428 Fragaria x ananassa
FAN05G0200 Fragaria x ananassa
FAN05G3165 Fragaria x ananassa
FAN09G1091 Fragaria x ananassa
FAN15G0729 Fragaria x ananassa
FAN20G2363 Fragaria x ananassa
FAN27G2534 Fragaria x ananassa
FvH4_2g34540 Fragaria vesca
FvH4_6g14720 Fragaria vesca
Glyma.03G174900 Glycine max
Glyma.04G038200 Glycine max
Glyma.06G039200 Glycine max
Glyma.10G046400 Glycine max
Glyma.13G134500 Glycine max
Glyma.14G082350 Glycine max
Glyma.17G242900 Glycine max
Glyma.19G175600 Glycine max
Gohir.A03G077200 Gossypium hirsutum
Gohir.A04G078200 Gossypium hirsutum
Gohir.A05G201850 Gossypium hirsutum
Gohir.A05G201900 Gossypium hirsutum
Gohir.A06G017500 Gossypium hirsutum
Gohir.A09G159800 Gossypium hirsutum
Gohir.A13G097100 Gossypium hirsutum
Gohir.D02G091800 Gossypium hirsutum
Gohir.D04G117400 Gossypium hirsutum
Gohir.D05G205000 Gossypium hirsutum
Gohir.D06G015600 Gossypium hirsutum
Gohir.D09G155400 Gossypium hirsutum
Gohir.D13G097425 Gossypium hirsutum
Gorai.001G249100 Gossypium raimondii
Gorai.005G103000 Gossypium raimondii
Gorai.006G176800 Gossypium raimondii
Gorai.009G211300 Gossypium raimondii
Gorai.009G422400 Gossypium raimondii
Gorai.010G018400 Gossypium raimondii
GSVIVG01009515001 Vitis vinifera
GSVIVG01010567001 Vitis vinifera
GSVIVG01025586001 Vitis vinifera
GSVIVG01025587001 Vitis vinifera
HanXRQChr01g0026501 Helianthus annuus
HanXRQChr02g0039411 Helianthus annuus
HanXRQChr09g0267881 Helianthus annuus
HanXRQChr11g0349501 Helianthus annuus
HanXRQChr14g0439551 Helianthus annuus
Haze_17533 Corylus avellana
Haze_17536 Corylus avellana
Haze_20703 Corylus avellana
Hma1.2p1_0982F.1_g243940 Hydrangea macrophylla
HPP92_019807 Vanilla planifolia
HPP92_019808 Vanilla planifolia
HPP92_027217 Vanilla planifolia
Hund12076 Selenicereus undatus
Hund17573 Selenicereus undatus
Lalb_Chr02g0153341 Lupinus albus
Lalb_Chr14g0368751 Lupinus albus
Lalb_Chr21g0314501 Lupinus albus
Lalb_Chr22g0355161 Lupinus albus
Lalb_Chr23g0267151 Lupinus albus
Lj1g0015112 Lotus japonicus
Lj1g0025902 Lotus japonicus
Lj2A103T69 Lonicera japonica
Lj3C974G20 Lonicera japonica
Lj4A54T45 Lonicera japonica
Lj4C774T6 Lonicera japonica
Lj5g0001643 Lotus japonicus
Lj5g0016391 Lotus japonicus
Lsat_1_v5_gn_1_21000 Lactuca sativa
Lsat_1_v5_gn_1_54840 Lactuca sativa
Lsat_1_v5_gn_4_125541 Lactuca sativa
Manes.05G172400 Manihot esculenta
Manes.05G172500 Manihot esculenta
Manes.18G035700 Manihot esculenta
Mapoly0089s0039 Marchantia polymorpha
MBI02_g02962_MAGBIO Magnolia biondii
MBI14_g16289_MAGBIO Magnolia biondii
MBI19_g13776_MAGBIO Magnolia biondii
MCO11G593 Micromonas commoda
MD04G1116800 Malus domestica
MD08G1102500 Malus domestica
MD12G1132500 Malus domestica
MD15G1030100 Malus domestica
MD15G1084000 Malus domestica
Medtr1g019740 Medicago truncatula
Medtr1g067380 Medicago truncatula
Medtr3g101590 Medicago truncatula
Medtr7g100370 Medicago truncatula
MELO3C000709.2 Cucumis melo
MELO3C001307.2 Cucumis melo
MELO3C003088.2 Cucumis melo
MELO3C009290.2 Cucumis melo
MELO3C010877.2 Cucumis melo
MELO3C028040.2 Cucumis melo
MELO3C035031.2 Cucumis melo
Migut.C00590 Erythranthe guttata
Migut.L01637 Erythranthe guttata
MSTRG.10282 Avicennia marina
MSTRG.1341 Avicennia marina
MSTRG.25097 Avicennia marina
MSTRG.5701 Avicennia marina
Nitab4.5_0000202g0380 Nicotiana tabacum
Nitab4.5_0000643g0090 Nicotiana tabacum
Nitab4.5_0000686g0080 Nicotiana tabacum
Nitab4.5_0000686g0090 Nicotiana tabacum
Nitab4.5_0001101g0060 Nicotiana tabacum
Nitab4.5_0006713g0020 Nicotiana tabacum
Nitab4.5_0007383g0090 Nicotiana tabacum
Nitab4.5_0009831g0010 Nicotiana tabacum
Nn2g10540 Nelumbo nucifera
Nn2g12842 Nelumbo nucifera
Nn5g30247 Nelumbo nucifera
Oeu013272.1 Olea europaea
Oeu023876.1 Olea europaea
Oeu029118.1 Olea europaea
Oeu035170.1 Olea europaea
Oeu044837.2 Olea europaea
Oeu060064.3 Olea europaea
Os01g0637100 Oryza sativa ssp. japonica
Os05g0462301 Oryza sativa ssp. japonica
Os05g0462400 Oryza sativa ssp. japonica
Os11g0615000 Oryza sativa ssp. japonica
Peaxi162Scf00039g00420 Petunia axillaris
Peaxi162Scf00252g01217 Petunia axillaris
Peaxi162Scf00604g00016 Petunia axillaris
PGR004G2464 Punica granatum
PGR031G1927 Punica granatum
PGR083G0900 Punica granatum
PGSC0003DMG400001738 Solanum tuberosum
PGSC0003DMG400010989 Solanum tuberosum
PGSC0003DMG400023934 Solanum tuberosum
PGSC0003DMG401008019 Solanum tuberosum
PGSC0003DMG402008019 Solanum tuberosum
Phvul.001G021400 Phaseolus vulgaris
Phvul.001G171900 Phaseolus vulgaris
Phvul.007G160600 Phaseolus vulgaris
Phvul.009G064400 Phaseolus vulgaris
Potri.006G214800 Populus trichocarpa
Potri.014G031000 Populus trichocarpa
Potri.016G081000 Populus trichocarpa
Pp3c11_3010 Physcomitrium patens
Pp3c11_3030 Physcomitrium patens
Pp3c7_21340 Physcomitrium patens
PRCOL_00005391 Prasinoderma coloniale
Prupe.1G437400 Prunus persica
Prupe.6G246600 Prunus persica
Psat3g047960 Pisum sativum
Psat5g043600 Pisum sativum
Psat6g012280 Pisum sativum
Psat6g069520 Pisum sativum
PSO170G6383 Papaver somniferum
PSO210G7344 Papaver somniferum
PSO339G0663 Papaver somniferum
PSO384G1921 Papaver somniferum
PSO541G5455 Papaver somniferum
QL02p005255 Quercus lobata
QL07p046154 Quercus lobata
RcHm_v2.0_Chr3g0467941 Rosa chinensis
RcHm_v2.0_Chr5g0048511 Rosa chinensis
RcHm_v2.0_Chr6g0307611 Rosa chinensis
RcHm_v2.0_Chr6g0307781 Rosa chinensis
Rhsim05G0185400 Rhododendron simsii
Rhsim06G0048700 Rhododendron simsii
Sabra06G0165800 Salix brachista
Sabra14G0022000 Salix brachista
Sabra16G0089200 Salix brachista
SalBow3G1241 Salvia bowleyana
SalBow4G1309 Salvia bowleyana
SalBow7G1470 Salvia bowleyana
Sc02g0007070 Simmondsia chinensis
Sc20g0004300 Simmondsia chinensis
Sc20g0004310 Simmondsia chinensis
Sed0004513 Sechium edule
Sed0016767 Sechium edule
Sed0017605 Sechium edule
Sed0023134 Sechium edule
SEGI_01148 Sequoiadendron giganteum
SEGI_02267 Sequoiadendron giganteum
SEGI_06898 Sequoiadendron giganteum
SEGI_14699 Sequoiadendron giganteum
SEGI_16386 Sequoiadendron giganteum
SEGI_32775 Sequoiadendron giganteum
SEGI_37928 Sequoiadendron giganteum
SGA_v2.0_scaffold208G41959 Striga asiatica
SGA_v2.0_scaffold35G14190 Striga asiatica
SHI08235 Sapria himalayana
SMO232G0068 Selaginella moellendorffii
SMO239G0188 Selaginella moellendorffii
Solyc04g079100.3 Solanum lycopersicum
Solyc09g005910.4 Solanum lycopersicum
Solyc10g084540.3 Solanum lycopersicum
Sopen04g032700 Solanum pennellii
Sopen04g032710 Solanum pennellii
Sopen09g001770 Solanum pennellii
Sopen10g033960 Solanum pennellii
Sp2g07570 Schrenkiella parvula
Sp3g07910 Schrenkiella parvula
TAR381G0046 Trochodendron aralioides
TAR629G1396 Trochodendron aralioides
TAR633G0574 Trochodendron aralioides
THA.LOC104816297 Tarenaya hassleriana
THA.LOC104822848 Tarenaya hassleriana
Thecc.05G048100 Theobroma cacao
Thecc.08G010200 Theobroma cacao
Thhalv10003142m.g Eutrema salsugineum
Thhalv10020030m.g Eutrema salsugineum
TPR.G28113 Trifolium pratense
TPR.G29276 Trifolium pratense
TPR.G31958 Trifolium pratense
TPR.G36924 Trifolium pratense
TPR.G39031 Trifolium pratense
TPR.G7330 Trifolium pratense
TWI36G0281 Tripterygium wilfordii
TWI53G1950 Tripterygium wilfordii
TWI74G1208 Tripterygium wilfordii
unitig_32.g11127 Utricularia gibba
unitig_749.g14261 Utricularia gibba
vmacro20100 Vaccinium macrocarpon
vmacro21530 Vaccinium macrocarpon
VMungo0251G0092 Vigna mungo
VMungo0331G0076 Vigna mungo
VMungo0647G0222 Vigna mungo
VMungo0647G2078 Vigna mungo
VMungo0720G0661 Vigna mungo
VMungo0720G0950 Vigna mungo
VMungo0720G2749 Vigna mungo
VMungo0720G3154 Vigna mungo
VMungo1080G1269 Vigna mungo
VMungo1127G1852 Vigna mungo
VMungo1309G2843 Vigna mungo
VMungo1383G2730 Vigna mungo
Zm00001eb166810 Zea mays
Zm00001eb289800 Zea mays

User provided reference genes

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