Gene: Nitab4.5_0006713g0020
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0006713g0020
- Transcript Identifier Nitab4.5_0006713g0020.1
- Gene Type Coding gene
- Location Nitab4.5_0006713 : 21743-35553 : positive
Gene Family Information
- ID HOM05D001809
- #Genes/#Species 362/100
- Phylogenetic origin
- ID ORTHO05D001802
- #Genes/#Species 353/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0006713g0020.1
- SR1-identifier Nta20g03910.1
Descriptions
- Description Pentatricopeptide repeat, Lipin, N-terminal, LNS2, Lipin/Ned1/Smp2, HAD-like domain, Tetratricopeptide-like helical
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019375 | ISO | PLAZA Integrative Orthology | galactolipid biosynthetic process | AT3G09560 |
| GO:0006629 | ISO | PLAZA Integrative Orthology | lipid metabolic process | AT3G09560 |
| GO:0008654 | ISO | PLAZA Integrative Orthology | phospholipid biosynthetic process | AT3G09560 |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT3G09560 |
| GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT3G09560 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008195 | ISO | PLAZA Integrative Orthology | phosphatidate phosphatase activity | AT3G09560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032586 | ISO | PLAZA Integrative Orthology | protein storage vacuole membrane | AT3G09560 |
| GO:0000139 | ISO | PLAZA Integrative Orthology | Golgi membrane | AT3G09560 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036412 | HAD-like superfamily |
| IPR032867 | DYW domain |
| IPR007651 | Lipin, N-terminal |
| IPR031315 | LNS2/PITP |
| IPR013209 | Lipin/Ned1/Smp2 (LNS2) |
| IPR002885 | Pentatricopeptide repeat |
| IPR026058 | LIPIN family |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR031703 | Lipin, middle domain |
| Mapman id | Description |
|---|---|
| 5.3.1 | Lipid metabolism.galactolipid and sulfolipid biosynthesis.phosphatidate phosphatase |