Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14300 Brassica napus
A03p68350 Brassica napus
A05p23850 Brassica napus
A09p13340 Brassica napus
A09p15730 Brassica napus
A09p27300 Brassica napus
Aa31LG2G510 Aethionema arabicum
Aa31LG6G5040 Aethionema arabicum
Aa31LG6G7090 Aethionema arabicum
Aa31LG9G10620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4390 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3427 Anthoceros agrestis
Actinidia02052 Actinidia chinensis
Actinidia05232 Actinidia chinensis
Actinidia14508 Actinidia chinensis
Actinidia27411 Actinidia chinensis
AL2G12590 Arabidopsis lyrata
AL6G46520 Arabidopsis lyrata
AL7G30530 Arabidopsis lyrata
Aqoxy5G04103 Aquilegia oxysepala
Aqoxy7G00475_Aqoxy7G00476 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5F9902 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9013S0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6U1PW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JD9NS5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3RSRR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7WKPY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJ1I43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VF25DI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZJJ54E Arachis hypogaea
AT1G63010 Arabidopsis thaliana
AT4G11810 Arabidopsis thaliana
AT4G22990 Arabidopsis thaliana
ATR0757G014 Amborella trichopoda
Atru.chr5.2181 Acer truncatum
Atru.chr5.2408 Acer truncatum
Atru.chr5.385 Acer truncatum
Atru.chr5.386 Acer truncatum
Atru.chr9.1530 Acer truncatum
Atru.chr9.1531 Acer truncatum
Atru.chr9.1532 Acer truncatum
AUR62004283 Chenopodium quinoa
AUR62010664 Chenopodium quinoa
AUR62017305 Chenopodium quinoa
AUR62033374 Chenopodium quinoa
BcaB01g01680 Brassica carinata
BcaB03g11753 Brassica carinata
BcaB03g11754 Brassica carinata
BcaB03g13668 Brassica carinata
BcaB07g31377 Brassica carinata
BcaC01g00808 Brassica carinata
BcaC01g02843 Brassica carinata
BcaC02g10406 Brassica carinata
BcaC04g22463 Brassica carinata
BcaC04g22732 Brassica carinata
BcaC05g27747 Brassica carinata
BcaC06g31929 Brassica carinata
BcaC09g51038 Brassica carinata
BcaNung01004 Brassica carinata
BolC1t01699H Brassica oleracea
BolC3t20744H Brassica oleracea
BolC4t24460H Brassica oleracea
BolC5t32476H Brassica oleracea
BolC7t41232H Brassica oleracea
BolC9t54496H Brassica oleracea
BolC9t54806H Brassica oleracea
BolC9t56308H Brassica oleracea
BraA01t01376Z Brassica rapa
BraA05t21257Z Brassica rapa
BraA09t36983Z Brassica rapa
BraA09t37217Z Brassica rapa
BraA09t38296Z Brassica rapa
C01p17610 Brassica napus
C03p84540 Brassica napus
C04p29300 Brassica napus
C05p37320 Brassica napus
C07p08160 Brassica napus
C09p15840 Brassica napus
C09p19020 Brassica napus
C09p19350 Brassica napus
C09p34620 Brassica napus
CAN.G1394.7 Capsicum annuum
CAN.G170.59 Capsicum annuum
CAN.G981.45 Capsicum annuum
CAN.G981.47 Capsicum annuum
CANSAT21G1241 Cannabis sativa
CANSAT21G2428 Cannabis sativa
CANSAT56G0021 Cannabis sativa
CARHR048630 Cardamine hirsuta
CARHR117580 Cardamine hirsuta
CARHR230050 Cardamine hirsuta
CARHR254500 Cardamine hirsuta
Carub.0002s0199 Capsella rubella
Carub.0006s3092 Capsella rubella
Carub.0007s1828 Capsella rubella
Ca_07876_v3 Cicer arietinum L.
Ca_10711_v3 Cicer arietinum L.
Ca_12099_v3 Cicer arietinum L.
CBR_g17817 Chara braunii
Cc02_g37110 Coffea canephora
Cc08_g13890 Coffea canephora
CDE04G0089 Ceratophyllum demersum
CDE12G0787 Ceratophyllum demersum
CDE12G0870 Ceratophyllum demersum
Cfa001842 Carpinus fangiana
Cfa012092 Carpinus fangiana
Ciclev10019105m.g Citrus clementina
Ciclev10019457m.g Citrus clementina
CiPaw.01G257300 Carya illinoinensis
CiPaw.11G141800 Carya illinoinensis
CiPaw.12G099300 Carya illinoinensis
ClCG01G003190 Citrullus lanatus
ClCG06G000140 Citrullus lanatus
COL.COLO4_05281 Corchorus olitorius
COL.COLO4_12636 Corchorus olitorius
Cpa.g.sc18.180 Carica papaya
Cpa.g.sc29.18 Carica papaya
Cpa.g.sc29.20 Carica papaya
CsaV3_5G003300 Cucumis sativus L.
CsaV3_6G005890 Cucumis sativus L.
CSS0004745 Camellia sinensis var. sinensis
CSS0013248 Camellia sinensis var. sinensis
CSS0043890 Camellia sinensis var. sinensis
DCAR_004630 Daucus carota
DCAR_005675 Daucus carota
DCAR_006766 Daucus carota
DCAR_008427 Daucus carota
Dinv32415 Davidia involucrata
Dinv39019 Davidia involucrata
Duzib068G1157 Durio zibethinus
Duzib084G0740 Durio zibethinus
Duzib138G1392 Durio zibethinus
Duzib205G1438 Durio zibethinus
ECA233G6034 Erigeron canadensis
ECA236G0876 Erigeron canadensis
ECA246G4641 Erigeron canadensis
EL10Ac1g00973 Beta vulgaris
EL10Ac5g12717 Beta vulgaris
EL10Ac5g12719 Beta vulgaris
EL10Ac7g16579 Beta vulgaris
EL10Ac9g20744 Beta vulgaris
Eucgr.D01930 Eucalyptus grandis
Eucgr.D02640 Eucalyptus grandis
Eucgr.E00526 Eucalyptus grandis
FAN01G2333 Fragaria x ananassa
FAN03G0387 Fragaria x ananassa
FAN04G2830 Fragaria x ananassa
FAN06G4722 Fragaria x ananassa
FAN06G4810 Fragaria x ananassa
FAN08G1826 Fragaria x ananassa
FAN10G0125 Fragaria x ananassa
FAN10G0576 Fragaria x ananassa
FAN13G2436 Fragaria x ananassa
FAN18G3200 Fragaria x ananassa
FvH4_5g01390 Fragaria vesca
FvH4_7g12920 Fragaria vesca
Glyma.09G128500 Glycine max
Glyma.09G263400 Glycine max
Glyma.10G229900 Glycine max
Glyma.16G176100 Glycine max
Glyma.18G228700 Glycine max
Glyma.20G163400 Glycine max
Gohir.A03G015056 Gossypium hirsutum
Gohir.A12G103300 Gossypium hirsutum
Gohir.A12G224600 Gossypium hirsutum
Gohir.D03G155200 Gossypium hirsutum
Gohir.D12G106700 Gossypium hirsutum
Gohir.D12G227400 Gossypium hirsutum
Gorai.003G162900 Gossypium raimondii
Gorai.008G115900 Gossypium raimondii
Gorai.008G243400 Gossypium raimondii
GSVIVG01019870001 Vitis vinifera
GSVIVG01027594001 Vitis vinifera
HanXRQChr06g0165101 Helianthus annuus
HanXRQChr06g0169371 Helianthus annuus
Haze_08959 Corylus avellana
Haze_08962 Corylus avellana
Haze_16705 Corylus avellana
Hma1.2p1_0138F.1_g062640 Hydrangea macrophylla
Hma1.2p1_0371F.1_g138210 Hydrangea macrophylla
HPP92_008384 Vanilla planifolia
HPP92_008389 Vanilla planifolia
HPP92_008390 Vanilla planifolia
HPP92_014562 Vanilla planifolia
HPP92_014565 Vanilla planifolia
HPP92_014583 Vanilla planifolia
Hund11531 Selenicereus undatus
Hund14716 Selenicereus undatus
Hund16964 Selenicereus undatus
Lalb_Chr01g0009511 Lupinus albus
Lalb_Chr03g0035021 Lupinus albus
Lalb_Chr03g0035031 Lupinus albus
Lalb_Chr06g0161381 Lupinus albus
Lalb_Chr19g0127101 Lupinus albus
Lalb_Chr19g0130461 Lupinus albus
Lj1g0022208 Lotus japonicus
Lj2A197G60 Lonicera japonica
Lj2g0019334 Lotus japonicus
Lj7A522T32 Lonicera japonica
Lj8C239T10 Lonicera japonica
Lsat_1_v5_gn_3_5980 Lactuca sativa
Lsat_1_v5_gn_4_156141 Lactuca sativa
Lsat_1_v5_gn_4_156260 Lactuca sativa
Lsat_1_v5_gn_4_80920 Lactuca sativa
Lsat_1_v5_gn_6_12921 Lactuca sativa
Lsat_1_v5_gn_7_8081 Lactuca sativa
Manes.01G068400 Manihot esculenta
Manes.02G031100 Manihot esculenta
Manes.05G040700 Manihot esculenta
Mapoly0094s0020 Marchantia polymorpha
MBI04_g40834_MAGBIO Magnolia biondii
MBI12_g38731_MAGBIO Magnolia biondii
MD02G1195400 Malus domestica
MD04G1068900 Malus domestica
MD06G1069900 Malus domestica
Medtr1g099580 Medicago truncatula
Medtr6g053510 Medicago truncatula
Medtr7g076520 Medicago truncatula
Medtr7g086150 Medicago truncatula
Medtr7g086170 Medicago truncatula
Medtr7g086180 Medicago truncatula
Medtr7g086330 Medicago truncatula
MELO3C005624.2 Cucumis melo
MELO3C022524.2 Cucumis melo
Migut.E01149 Erythranthe guttata
MSTRG.20786 Avicennia marina
MSTRG.25570 Avicennia marina
Nitab4.5_0000360g0060 Nicotiana tabacum
Nitab4.5_0001200g0080 Nicotiana tabacum
Nitab4.5_0001714g0180 Nicotiana tabacum
Nitab4.5_0002228g0050 Nicotiana tabacum
Nitab4.5_0002886g0070 Nicotiana tabacum
Nitab4.5_0006706g0020 Nicotiana tabacum
Nitab4.5_0007891g0020 Nicotiana tabacum
Nitab4.5_0009025g0030 Nicotiana tabacum
Nn1g01322 Nelumbo nucifera
Nn6g34289 Nelumbo nucifera
Oeu001899.1 Olea europaea
Oeu036774.1 Olea europaea
Oeu059053.1 Olea europaea
Oeu059224.1 Olea europaea
Os02g0678200 Oryza sativa ssp. japonica
Os04g0573000 Oryza sativa ssp. japonica
Os06g0129400 Oryza sativa ssp. japonica
Os09g0521800 Oryza sativa ssp. japonica
Peaxi162Scf00021g00234 Petunia axillaris
Peaxi162Scf00102g01436 Petunia axillaris
Peaxi162Scf00620g00827 Petunia axillaris
Peaxi162Scf01294g00230 Petunia axillaris
PGR031G1326 Punica granatum
PGR031G1655 Punica granatum
PGR042G2530 Punica granatum
PGSC0003DMG400000003 Solanum tuberosum
PGSC0003DMG400004254 Solanum tuberosum
PGSC0003DMG400012523 Solanum tuberosum
PGSC0003DMG400021793 Solanum tuberosum
PGSC0003DMG402022752 Solanum tuberosum
Phvul.004G104300 Phaseolus vulgaris
Phvul.007G075600 Phaseolus vulgaris
Phvul.008G069400 Phaseolus vulgaris
Potri.001G111400 Populus trichocarpa
Potri.003G120600 Populus trichocarpa
Potri.014G078000 Populus trichocarpa
Pp3c13_1430 Physcomitrium patens
Pp3c1_4260 Physcomitrium patens
Pp3c2_35900 Physcomitrium patens
Pp3c2_35901 Physcomitrium patens
Pp3c6_9870 Physcomitrium patens
Pp3c6_9890 Physcomitrium patens
Pp3c7_15890 Physcomitrium patens
Pp3c9_21270 Physcomitrium patens
Prupe.2G153100 Prunus persica
Prupe.5G089200 Prunus persica
Psat0s4150g0120 Pisum sativum
Psat0s4150g0160 Pisum sativum
Psat1g107640 Pisum sativum
Psat1g107920 Pisum sativum
Psat1g107960 Pisum sativum
Psat3g112280 Pisum sativum
Psat6g195480 Pisum sativum
Psat6g195520 Pisum sativum
Psat7g009680 Pisum sativum
PSO063G1018 Papaver somniferum
PSO478G0440 Papaver somniferum
PSO782G1120 Papaver somniferum
PSO782G2834 Papaver somniferum
QL08p050870 Quercus lobata
QL09p017061 Quercus lobata
QL12p016855 Quercus lobata
QL12p016882 Quercus lobata
QL12p016890 Quercus lobata
RcHm_v2.0_Chr1g0352001 Rosa chinensis
RcHm_v2.0_Chr7g0199491 Rosa chinensis
Rhsim07G0022200 Rhododendron simsii
Rhsim07G0095400 Rhododendron simsii
Rhsim07G0095500 Rhododendron simsii
Sabra01G0084900 Salix brachista
Sabra03G0084700 Salix brachista
Sabra14G0054300 Salix brachista
Sabra14G0054400 Salix brachista
SalBow1G5700 Salvia bowleyana
SalBow6G2137 Salvia bowleyana
SalBow7G0574 Salvia bowleyana
Sc01g0008810 Simmondsia chinensis
Sc02g0002250 Simmondsia chinensis
Sc07g0009510 Simmondsia chinensis
Sed0003395 Sechium edule
Sed0015697 Sechium edule
SEGI_25399 Sequoiadendron giganteum
SEGI_35884 Sequoiadendron giganteum
SEGI_38407 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40895 Striga asiatica
SGA_v2.0_scaffold286G47107 Striga asiatica
SHI07927 Sapria himalayana
SMO139G0067 Selaginella moellendorffii
SMO145G0150 Selaginella moellendorffii
SMO147G0102 Selaginella moellendorffii
SMO273G0038 Selaginella moellendorffii
Solyc01g091870.3 Solanum lycopersicum
Solyc02g043960.1 Solanum lycopersicum
Solyc04g026050.1 Solanum lycopersicum
Solyc08g007800.3 Solanum lycopersicum
Solyc08g044470.1 Solanum lycopersicum
Solyc08g080200.4 Solanum lycopersicum
Solyc10g050310.1 Solanum lycopersicum
Solyc12g056440.2 Solanum lycopersicum
Solyc12g082710.1 Solanum lycopersicum
Sopen01g037640 Solanum pennellii
Sopen08g003730 Solanum pennellii
Sopen08g028560 Solanum pennellii
Sopen12g029030 Solanum pennellii
Sp2g01570 Schrenkiella parvula
Sp6g05640 Schrenkiella parvula
Sp7g21080 Schrenkiella parvula
TAR375G0372 Trochodendron aralioides
TAR629G2591 Trochodendron aralioides
THA.LOC104801466 Tarenaya hassleriana
THA.LOC104806365 Tarenaya hassleriana
THA.LOC104809425 Tarenaya hassleriana
THA.LOC104814238 Tarenaya hassleriana
Thecc.01G369900 Theobroma cacao
Thecc.03G270200 Theobroma cacao
Thhalv10023313m.g Eutrema salsugineum
Thhalv10024565m.g Eutrema salsugineum
Thhalv10029436m.g Eutrema salsugineum
TPR.G7767 Trifolium pratense
TPR.G7776 Trifolium pratense
TPR.G9166 Trifolium pratense
TWI14G1404 Tripterygium wilfordii
TWI60G1117 Tripterygium wilfordii
TWI81G0964 Tripterygium wilfordii
unitig_21.g20362 Utricularia gibba
unitig_21.g20363 Utricularia gibba
unitig_744.g24441 Utricularia gibba
vmacro13345 Vaccinium macrocarpon
vmacro14007 Vaccinium macrocarpon
VMungo0720G2020 Vigna mungo
VMungo1383G1054 Vigna mungo
Zm00001eb073510 Zea mays
Zm00001eb250590 Zea mays
Zm00001eb269520 Zea mays
Zm00001eb378430 Zea mays
Zm00001eb428590 Zea mays

User provided reference genes

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