Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p64410 Brassica napus
A03p64420 Brassica napus
A06p33160 Brassica napus
A07p19060 Brassica napus
A08p22360 Brassica napus
Aa31LG5G7720 Aethionema arabicum
Aa31LG6G13510 Aethionema arabicum
Aa31LG8G15510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.190 Anthoceros agrestis
Actinidia07116 Actinidia chinensis
Actinidia19166 Actinidia chinensis
Actinidia24080 Actinidia chinensis
Ah.01g015020 Amaranthus hybridus
Ah.03g139310 Amaranthus hybridus
AL3G51880 Arabidopsis lyrata
AL4G22870 Arabidopsis lyrata
AL7G14310 Arabidopsis lyrata
Aqoxy4G03215 Aquilegia oxysepala
Aqoxy5G01682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3263BZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65BX45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VW9F3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G27FXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0N14A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XB2EEE Arachis hypogaea
AT2G18540 Arabidopsis thaliana
AT2G28490 Arabidopsis thaliana
AT4G36700 Arabidopsis thaliana
ATR0733G179 Amborella trichopoda
ATR1159G004 Amborella trichopoda
Atru.chr3.537 Acer truncatum
AUR62003182 Chenopodium quinoa
AUR62006523 Chenopodium quinoa
AUR62008002 Chenopodium quinoa
AUR62025011 Chenopodium quinoa
BcaB02g10164 Brassica carinata
BcaB03g12375 Brassica carinata
BcaB08g34828 Brassica carinata
BcaC01g00447 Brassica carinata
BcaC01g02859 Brassica carinata
BcaC02g10963 Brassica carinata
BcaC02g10964 Brassica carinata
BcaNung06145 Brassica carinata
BcaNung07141 Brassica carinata
BolC3t18190H Brassica oleracea
BolC3t20247H Brassica oleracea
BolC4t23782H Brassica oleracea
BolC7t46609H Brassica oleracea
BraA03t15508Z Brassica rapa
BraA03t15509Z Brassica rapa
BraA06t26247Z Brassica rapa
BraA07t29611Z Brassica rapa
BraA08t34192Z Brassica rapa
C03p59290 Brassica napus
C03p79950 Brassica napus
C04p22860 Brassica napus
C07p61870 Brassica napus
CAN.G1001.13 Capsicum annuum
CAN.G1001.15 Capsicum annuum
CAN.G1001.16 Capsicum annuum
CAN.G1001.17 Capsicum annuum
CAN.G1001.19 Capsicum annuum
CAN.G1001.20 Capsicum annuum
CAN.G1001.21 Capsicum annuum
CAN.G1839.6 Capsicum annuum
CAN.G1839.7 Capsicum annuum
CAN.G1839.9 Capsicum annuum
CAN.G358.123 Capsicum annuum
CAN.G553.2 Capsicum annuum
CANSAT01G3243 Cannabis sativa
CANSAT54G1656 Cannabis sativa
CARHR109140 Cardamine hirsuta
CARHR121490 Cardamine hirsuta
CARHR245050 Cardamine hirsuta
Carub.0003s3273 Capsella rubella
Carub.0004s0944 Capsella rubella
Carub.0007s0362 Capsella rubella
Ca_00392_v3 Cicer arietinum L.
Ca_01432_v3 Cicer arietinum L.
Ca_19243_v3 Cicer arietinum L.
CBR_g37795 Chara braunii
CBR_g48323 Chara braunii
CBR_g6738 Chara braunii
CBR_g6739 Chara braunii
Cc01_g11520 Coffea canephora
Cc07_g09190 Coffea canephora
Cc07_g09200 Coffea canephora
CDE01G0620 Ceratophyllum demersum
CDE02G0356 Ceratophyllum demersum
CDE02G0946 Ceratophyllum demersum
CDE09G0795 Ceratophyllum demersum
Cfa004281 Carpinus fangiana
Cfa011361 Carpinus fangiana
Ciclev10027019m.g Citrus clementina
Ciclev10028266m.g Citrus clementina
CiPaw.01G034800 Carya illinoinensis
CiPaw.14G078000 Carya illinoinensis
ClCG01G019390 Citrullus lanatus
ClCG02G020970 Citrullus lanatus
COL.COLO4_05496 Corchorus olitorius
COL.COLO4_06592 Corchorus olitorius
COL.COLO4_08544 Corchorus olitorius
COL.COLO4_22115 Corchorus olitorius
COL.COLO4_24138 Corchorus olitorius
COL.COLO4_25243 Corchorus olitorius
COL.COLO4_25244 Corchorus olitorius
Cpa.g.sc139.71 Carica papaya
Cpa.g.sc158.3 Carica papaya
Cpa.g.sc62.100 Carica papaya
CsaV3_6G021660 Cucumis sativus L.
CsaV3_6G046100 Cucumis sativus L.
CSS0016309 Camellia sinensis var. sinensis
CSS0019731 Camellia sinensis var. sinensis
CSS0045971 Camellia sinensis var. sinensis
DCAR_018830 Daucus carota
DCAR_021445 Daucus carota
Dinv04503 Davidia involucrata
Dinv26810 Davidia involucrata
Dinv26811 Davidia involucrata
Dinv32785 Davidia involucrata
Dinv32786 Davidia involucrata
Dinv39960 Davidia involucrata
Duzib168G1312 Durio zibethinus
Duzib187G1910 Durio zibethinus
ECA233G5833 Erigeron canadensis
ECA238G1560 Erigeron canadensis
ECA238G1711 Erigeron canadensis
ECA238G3485 Erigeron canadensis
ECA238G4653 Erigeron canadensis
ECA246G3405 Erigeron canadensis
EL10Ac6g14913 Beta vulgaris
EL10Ac9g22469 Beta vulgaris
Eucgr.B02472 Eucalyptus grandis
Eucgr.J00948 Eucalyptus grandis
FAN11G1933 Fragaria x ananassa
FAN11G2704 Fragaria x ananassa
FAN11G3753 Fragaria x ananassa
FAN16G0706 Fragaria x ananassa
FAN16G2054 Fragaria x ananassa
FAN16G2791 Fragaria x ananassa
FAN19G0942 Fragaria x ananassa
FAN21G0076 Fragaria x ananassa
FAN21G3350 Fragaria x ananassa
FAN21G4030 Fragaria x ananassa
FAN23G0891 Fragaria x ananassa
FAN25G0620 Fragaria x ananassa
FAN25G0759 Fragaria x ananassa
FAN25G2815 Fragaria x ananassa
FAN25G2967 Fragaria x ananassa
FAN26G2185 Fragaria x ananassa
FAN28G0335 Fragaria x ananassa
FvH4_1g13730 Fragaria vesca
FvH4_3g33170 Fragaria vesca
FvH4_3g33180 Fragaria vesca
FvH4_3g33190 Fragaria vesca
FvH4_3g33240 Fragaria vesca
Glyma.01G177000 Glycine max
Glyma.11G065800 Glycine max
Glyma.11G153587 Glycine max
Glyma.12G071600 Glycine max
Glyma.13G328400 Glycine max
Gohir.A03G161350 Gossypium hirsutum
Gohir.A07G116400 Gossypium hirsutum
Gohir.A11G186000 Gossypium hirsutum
Gohir.D07G120800 Gossypium hirsutum
Gohir.D11G192600 Gossypium hirsutum
Gorai.001G130200 Gossypium raimondii
Gorai.007G205600 Gossypium raimondii
GSVIVG01019005001 Vitis vinifera
GSVIVG01025139001 Vitis vinifera
HanXRQChr03g0071451 Helianthus annuus
HanXRQChr06g0170171 Helianthus annuus
HanXRQChr07g0190491 Helianthus annuus
HanXRQChr13g0404461 Helianthus annuus
Haze_15119 Corylus avellana
Haze_23907 Corylus avellana
Haze_23908 Corylus avellana
Hma1.2p1_0071F.1_g038040 Hydrangea macrophylla
Hma1.2p1_0568F.1_g180210 Hydrangea macrophylla
Hma1.2p1_0905F.1_g235320 Hydrangea macrophylla
Hma1.2p1_1228F.1_g268600 Hydrangea macrophylla
HPP92_014258 Vanilla planifolia
HPP92_021307 Vanilla planifolia
Lalb_Chr01g0004171 Lupinus albus
Lalb_Chr05g0212941 Lupinus albus
Lalb_Chr09g0322571 Lupinus albus
Lalb_Chr14g0374791 Lupinus albus
Lalb_Chr22g0350181 Lupinus albus
Lj2A1035T49 Lonicera japonica
Lj2C448T6 Lonicera japonica
Lj2g0000276 Lotus japonicus
Lj3g0006595 Lotus japonicus
Lj3g0013428 Lotus japonicus
Lsat_1_v5_gn_2_76801 Lactuca sativa
Lsat_1_v5_gn_2_77901 Lactuca sativa
Lsat_1_v5_gn_3_78340 Lactuca sativa
Lsat_1_v5_gn_6_47021 Lactuca sativa
Manes.11G141600 Manihot esculenta
Manes.12G089864 Manihot esculenta
Manes.13G137200 Manihot esculenta
MBI14_g19545_MAGBIO Magnolia biondii
MBI16_g37295_MAGBIO Magnolia biondii
MD02G1152000 Malus domestica
MD03G1105100 Malus domestica
MD11G1130400 Malus domestica
MD15G1266400 Malus domestica
Medtr2g093350 Medicago truncatula
Medtr2g093390 Medicago truncatula
Medtr2g093410 Medicago truncatula
Medtr2g093520 Medicago truncatula
Medtr2g093550 Medicago truncatula
Medtr2g093590 Medicago truncatula
Medtr2g093620 Medicago truncatula
Medtr2g093630 Medicago truncatula
Medtr4g060780 Medicago truncatula
Medtr5g019780 Medicago truncatula
MELO3C007813.2 Cucumis melo
MELO3C025750.2 Cucumis melo
Migut.D02185 Erythranthe guttata
Migut.H00185 Erythranthe guttata
Migut.N02619 Erythranthe guttata
MSTRG.18636 Avicennia marina
Nitab4.5_0000106g0050 Nicotiana tabacum
Nitab4.5_0000196g0010 Nicotiana tabacum
Nitab4.5_0000196g0020 Nicotiana tabacum
Nitab4.5_0001279g0150 Nicotiana tabacum
Nitab4.5_0001802g0100 Nicotiana tabacum
Nitab4.5_0002128g0030 Nicotiana tabacum
Nitab4.5_0002129g0100 Nicotiana tabacum
Nn1g02542 Nelumbo nucifera
Nn1g02543 Nelumbo nucifera
Nn1g05077 Nelumbo nucifera
Nn2g10684 Nelumbo nucifera
Nn2g13012 Nelumbo nucifera
Nn4g24405 Nelumbo nucifera
Nn5g29533 Nelumbo nucifera
Oeu005907.1 Olea europaea
Oeu021563.1 Olea europaea
Oeu031890.1 Olea europaea
Oeu036289.1 Olea europaea
Oeu059105.2 Olea europaea
Os03g0197300 Oryza sativa ssp. japonica
Os03g0336100 Oryza sativa ssp. japonica
Peaxi162Scf00101g00910 Petunia axillaris
Peaxi162Scf00205g00011 Petunia axillaris
Peaxi162Scf00389g00093 Petunia axillaris
Peaxi162Scf00427g00512 Petunia axillaris
Peaxi162Scf00476g00220 Petunia axillaris
Peaxi162Scf00476g00223 Petunia axillaris
Peaxi162Scf00476g00315 Petunia axillaris
Peaxi162Scf00476g00321 Petunia axillaris
PGR102G3185 Punica granatum
PGR119G1372 Punica granatum
PGSC0003DMG400003374 Solanum tuberosum
PGSC0003DMG400007501 Solanum tuberosum
PGSC0003DMG400007502 Solanum tuberosum
PGSC0003DMG400012661 Solanum tuberosum
PGSC0003DMG400020917 Solanum tuberosum
PGSC0003DMG400027378 Solanum tuberosum
PGSC0003DMG401007500 Solanum tuberosum
PGSC0003DMG402007500 Solanum tuberosum
Phvul.002G027900 Phaseolus vulgaris
Phvul.005G137200 Phaseolus vulgaris
Phvul.011G072800 Phaseolus vulgaris
Potri.001G259208 Populus trichocarpa
Potri.007G029100 Populus trichocarpa
Potri.009G054700 Populus trichocarpa
Prupe.1G032200 Prunus persica
Prupe.6G095000 Prunus persica
Prupe.7G151000 Prunus persica
Psat0s137g0280 Pisum sativum
Psat2g161120 Pisum sativum
Psat5g277440 Pisum sativum
PSO063G6855 Papaver somniferum
PSO170G3836 Papaver somniferum
QL01p037284 Quercus lobata
QL06p045400 Quercus lobata
RcHm_v2.0_Chr2g0102141 Rosa chinensis
RcHm_v2.0_Chr5g0060491 Rosa chinensis
RcHm_v2.0_Chr5g0060501 Rosa chinensis
RcHm_v2.0_Chr5g0060531 Rosa chinensis
RcHm_v2.0_Chr5g0060591 Rosa chinensis
Rhsim01G0219300 Rhododendron simsii
Rhsim01G0219400 Rhododendron simsii
Rhsim01G0219500 Rhododendron simsii
Rhsim01G0219600 Rhododendron simsii
Rhsim01G0219700 Rhododendron simsii
Rhsim01G0219800 Rhododendron simsii
Rhsim01G0219900 Rhododendron simsii
Rhsim01G0220000 Rhododendron simsii
Rhsim08G0112800 Rhododendron simsii
Rhsim09G0035200 Rhododendron simsii
Rhsim09G0035300 Rhododendron simsii
Rhsim09G0035400 Rhododendron simsii
Rhsim13G0092600 Rhododendron simsii
Sabra05G0103400 Salix brachista
Sabra09G0040000 Salix brachista
SalBow5G5464 Salvia bowleyana
Sc06g0010510 Simmondsia chinensis
Sc16g0000950 Simmondsia chinensis
Sed0004107 Sechium edule
Sed0006496 Sechium edule
SEGI_13794 Sequoiadendron giganteum
SEGI_19513 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00910 Striga asiatica
SGA_v2.0_scaffold33G13385 Striga asiatica
SGA_v2.0_scaffold61G21168 Striga asiatica
SHI06059 Sapria himalayana
SHI08678 Sapria himalayana
SMO137G0028 Selaginella moellendorffii
SMO141G0312 Selaginella moellendorffii
SMO351G0425 Selaginella moellendorffii
SMO364G0856 Selaginella moellendorffii
Solyc02g085590.4 Solanum lycopersicum
Solyc03g044210.4 Solanum lycopersicum
Solyc06g075260.3 Solanum lycopersicum
Solyc06g075270.4 Solanum lycopersicum
Solyc06g075280.3 Solanum lycopersicum
Solyc06g075290.4 Solanum lycopersicum
Solyc06g075300.3 Solanum lycopersicum
Solyc06g075320.3 Solanum lycopersicum
Solyc11g072380.2 Solanum lycopersicum
Sopen02g030260 Solanum pennellii
Sopen03g008250 Solanum pennellii
Sopen06g031650 Solanum pennellii
Sopen06g031660 Solanum pennellii
Sopen06g031670 Solanum pennellii
Sopen06g031690 Solanum pennellii
Sopen06g031700 Solanum pennellii
Sopen06g031720 Solanum pennellii
Sopen11g030030 Solanum pennellii
Sp3g31990 Schrenkiella parvula
Sp4g11320 Schrenkiella parvula
Sp7g34360 Schrenkiella parvula
TAR369G0446 Trochodendron aralioides
TAR381G1082 Trochodendron aralioides
TAR623G0167 Trochodendron aralioides
TAR623G0459 Trochodendron aralioides
THA.LOC104800613 Tarenaya hassleriana
THA.LOC104807543 Tarenaya hassleriana
THA.LOC104819798 Tarenaya hassleriana
Thecc.01G039500 Theobroma cacao
Thecc.09G260000 Theobroma cacao
Thhalv10017921m.g Eutrema salsugineum
Thhalv10024697m.g Eutrema salsugineum
TPR.G11484 Trifolium pratense
TPR.G11569 Trifolium pratense
TPR.G14921 Trifolium pratense
TPR.G18814 Trifolium pratense
TPR.G27035 Trifolium pratense
TWI31G0073 Tripterygium wilfordii
TWI53G1751 Tripterygium wilfordii
TWI79G1599 Tripterygium wilfordii
unitig_0.g1037 Utricularia gibba
unitig_52.g17593 Utricularia gibba
vmacro03174 Vaccinium macrocarpon
vmacro14457 Vaccinium macrocarpon
vmacro14458 Vaccinium macrocarpon
vmacro14459 Vaccinium macrocarpon
vmacro14460 Vaccinium macrocarpon
vmacro14461 Vaccinium macrocarpon
vmacro17861 Vaccinium macrocarpon
VMungo1127G0357 Vigna mungo
Zm00001eb016090 Zea mays
Zm00001eb401000 Zea mays

User provided reference genes

Program Settings