Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p42310 Brassica napus
A03p22110 Brassica napus
A03p35940 Brassica napus
A04p30510 Brassica napus
A05p39520 Brassica napus
A10p33030 Brassica napus
Aa31LG3G1970 Aethionema arabicum
Aa31LG3G4520 Aethionema arabicum
Aa31LG5G20350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2435 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2877 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.987 Anthoceros agrestis
Actinidia02989 Actinidia chinensis
Actinidia16954 Actinidia chinensis
Actinidia29203 Actinidia chinensis
Actinidia37251 Actinidia chinensis
Ah.09g232890 Amaranthus hybridus
Ah.14g086620 Amaranthus hybridus
AL3G20680 Arabidopsis lyrata
AL4G36740 Arabidopsis lyrata
AL5G36290 Arabidopsis lyrata
AL6G11890 Arabidopsis lyrata
Aqoxy3G02880 Aquilegia oxysepala
Aqoxy4G03067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A7ZCQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FG6251 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VA70GF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6ZAT9 Arachis hypogaea
AT2G39390 Arabidopsis thaliana
AT3G09500 Arabidopsis thaliana
AT3G55170 Arabidopsis thaliana
AT5G02610 Arabidopsis thaliana
ATR0759G066 Amborella trichopoda
ATR0820G095 Amborella trichopoda
ATR1091G063 Amborella trichopoda
Atru.chr12.575 Acer truncatum
Atru.chr3.3804 Acer truncatum
AUR62013411 Chenopodium quinoa
AUR62027577 Chenopodium quinoa
AUR62027580 Chenopodium quinoa
AUR62035776 Chenopodium quinoa
AUR62035779 Chenopodium quinoa
AUR62035782 Chenopodium quinoa
AUR62042738 Chenopodium quinoa
BcaB03g11597 Brassica carinata
BcaB04g19670 Brassica carinata
BcaB05g21879 Brassica carinata
BcaB08g36054 Brassica carinata
BcaC01g04236 Brassica carinata
BcaC05g29676 Brassica carinata
BcaC05g29678 Brassica carinata
BcaC06g32003 Brassica carinata
BcaC09g48028 Brassica carinata
BcaC09g48084 Brassica carinata
BcaNung03284 Brassica carinata
BolC1t05449H Brassica oleracea
BolC2t06057H Brassica oleracea
BolC3t15002H Brassica oleracea
BolC3t16627H Brassica oleracea
BolC4t28224H Brassica oleracea
BolC5t34505H Brassica oleracea
BolC9t60135H Brassica oleracea
BraA01t04297Z Brassica rapa
BraA02t04726Z Brassica rapa
BraA03t12766Z Brassica rapa
BraA04t18456Z Brassica rapa
BraA05t22733Z Brassica rapa
BraA10t45340Z Brassica rapa
C02p00590 Brassica napus
C03p26180 Brassica napus
C03p43580 Brassica napus
C04p67290 Brassica napus
C05p58550 Brassica napus
C09p74000 Brassica napus
CAN.G1557.6 Capsicum annuum
CAN.G160.44 Capsicum annuum
CAN.G1602.3 Capsicum annuum
CAN.G17.13 Capsicum annuum
CAN.G438.89 Capsicum annuum
CAN.G80.37 Capsicum annuum
CANSAT54G2002 Cannabis sativa
CANSAT56G2335 Cannabis sativa
CARHR083900 Cardamine hirsuta
CARHR134240 Cardamine hirsuta
CARHR210740 Cardamine hirsuta
Carub.0003s0860 Capsella rubella
Carub.0004s2144 Capsella rubella
Carub.0005s2181 Capsella rubella
Carub.0006s0142 Capsella rubella
Ca_09593_v3 Cicer arietinum L.
Ca_11307_v3 Cicer arietinum L.
Ca_19205_v3 Cicer arietinum L.
CBR_g46852 Chara braunii
Cc00_g13980 Coffea canephora
Cc01_g04620 Coffea canephora
Cc01_g12170 Coffea canephora
CDE02G0340 Ceratophyllum demersum
CDE05G1873 Ceratophyllum demersum
CDE09G0965 Ceratophyllum demersum
Cfa022885 Carpinus fangiana
Ciclev10029592m.g Citrus clementina
Ciclev10033083m.g Citrus clementina
CiPaw.01G280900 Carya illinoinensis
CiPaw.02G179500 Carya illinoinensis
CiPaw.09G187000 Carya illinoinensis
ClCG02G013520 Citrullus lanatus
ClCG09G020260 Citrullus lanatus
COL.COLO4_09159 Corchorus olitorius
COL.COLO4_10903 Corchorus olitorius
COL.COLO4_18432 Corchorus olitorius
Cpa.g.sc1.318 Carica papaya
Cpa.g.sc1.320 Carica papaya
Cre14.g617900 Chlamydomonas reinhardtii
CsaV3_5G006630 Cucumis sativus L.
CsaV3_5G026180 Cucumis sativus L.
CSS0000047 Camellia sinensis var. sinensis
CSS0047319 Camellia sinensis var. sinensis
CSS0050012 Camellia sinensis var. sinensis
DCAR_015235 Daucus carota
DCAR_019159 Daucus carota
DCAR_027691 Daucus carota
Dinv25950 Davidia involucrata
Dinv26281 Davidia involucrata
Dinv31400 Davidia involucrata
Dinv32857 Davidia involucrata
Duzib093G1328 Durio zibethinus
Duzib106G0904 Durio zibethinus
Duzib106G1118 Durio zibethinus
Duzib114G0962 Durio zibethinus
Duzib128G0327 Durio zibethinus
Duzib150G0280 Durio zibethinus
Duzib168G0362 Durio zibethinus
Duzib170G0477 Durio zibethinus
ECA232G1707 Erigeron canadensis
ECA238G4766 Erigeron canadensis
EL10Ac2g03472 Beta vulgaris
EL10Ac8g19775 Beta vulgaris
Eucgr.G02768 Eucalyptus grandis
Eucgr.I00371 Eucalyptus grandis
Eucgr.J01163 Eucalyptus grandis
FAN01G2202 Fragaria x ananassa
FAN03G0952 Fragaria x ananassa
FAN06G2467 Fragaria x ananassa
FAN06G2735 Fragaria x ananassa
FAN06G4935 Fragaria x ananassa
FAN10G2032 Fragaria x ananassa
FAN10G2916 Fragaria x ananassa
FAN11G0320 Fragaria x ananassa
FAN21G1783 Fragaria x ananassa
FAN25G3822 Fragaria x ananassa
FvH4_3g34730 Fragaria vesca
FvH4_7g20960 Fragaria vesca
Glyma.10G045900 Glycine max
Glyma.10G291500 Glycine max
Glyma.13G133900 Glycine max
Glyma.13G331900 Glycine max
Glyma.15G042300 Glycine max
Glyma.20G240700 Glycine max
Gohir.A03G037800 Gossypium hirsutum
Gohir.A05G299600 Gossypium hirsutum
Gohir.A08G000157 Gossypium hirsutum
Gohir.A10G210300 Gossypium hirsutum
Gohir.D03G130600 Gossypium hirsutum
Gohir.D05G299200 Gossypium hirsutum
Gohir.D08G010400 Gossypium hirsutum
Gohir.D10G218600 Gossypium hirsutum
Gohir.D13G097600 Gossypium hirsutum
Gorai.001G250400 Gossypium raimondii
Gorai.003G137400 Gossypium raimondii
Gorai.004G003700 Gossypium raimondii
Gorai.009G316700 Gossypium raimondii
Gorai.011G245300 Gossypium raimondii
GSVIVG01005972001 Vitis vinifera
GSVIVG01025050001 Vitis vinifera
HanXRQChr07g0200791 Helianthus annuus
HanXRQChr08g0219951 Helianthus annuus
HanXRQChr09g0246161 Helianthus annuus
HanXRQChr14g0457581 Helianthus annuus
HanXRQChr15g0496911 Helianthus annuus
Haze_16983 Corylus avellana
Haze_20714 Corylus avellana
Haze_27698 Corylus avellana
Hma1.2p1_0207F.1_g087770 Hydrangea macrophylla
Hma1.2p1_0846F.1_g227770 Hydrangea macrophylla
Hund19991 Selenicereus undatus
Hund19992 Selenicereus undatus
Hund21504 Selenicereus undatus
Hund22422 Selenicereus undatus
Lalb_Chr02g0143951 Lupinus albus
Lalb_Chr02g0153311 Lupinus albus
Lalb_Chr06g0164161 Lupinus albus
Lalb_Chr21g0307271 Lupinus albus
Lalb_Chr21g0314471 Lupinus albus
Lj1A161G65 Lonicera japonica
Lj3g0002895 Lotus japonicus
Lj3g0015652 Lotus japonicus
Lj5g0008229 Lotus japonicus
Lj8A91T62 Lonicera japonica
Lsat_1_v5_gn_2_115601 Lactuca sativa
Lsat_1_v5_gn_8_18241 Lactuca sativa
Lsat_1_v5_gn_9_66241 Lactuca sativa
Manes.06G010001 Manihot esculenta
Manes.07G108300 Manihot esculenta
Manes.07G108900 Manihot esculenta
Manes.13G063275 Manihot esculenta
Mapoly0006s0190 Marchantia polymorpha
Mapoly0097s0080 Marchantia polymorpha
MBI05_g07861_MAGBIO Magnolia biondii
MBI16_g39218_MAGBIO Magnolia biondii
MCO01G442 Micromonas commoda
MD01G1119600 Malus domestica
MD03G1102300 Malus domestica
MD07G1188600 Malus domestica
MD11G1116100 Malus domestica
Medtr1g067490 Medicago truncatula
Medtr1g105880 Medicago truncatula
Medtr1g115545 Medicago truncatula
Medtr4g062410 Medicago truncatula
Medtr4g072410 Medicago truncatula
Medtr5g045540 Medicago truncatula
Medtr7g080090 Medicago truncatula
MELO3C023820.2 Cucumis melo
MELO3C025480.2 Cucumis melo
Migut.D02140 Erythranthe guttata
Migut.N02657 Erythranthe guttata
Migut.N02999 Erythranthe guttata
MSTRG.18602 Avicennia marina
MSTRG.21177 Avicennia marina
MSTRG.22072 Avicennia marina
Nitab4.5_0000426g0150 Nicotiana tabacum
Nitab4.5_0000766g0020 Nicotiana tabacum
Nitab4.5_0000914g0220 Nicotiana tabacum
Nitab4.5_0001953g0080 Nicotiana tabacum
Nitab4.5_0003920g0010 Nicotiana tabacum
Nitab4.5_0008987g0040 Nicotiana tabacum
Nitab4.5_0009005g0030 Nicotiana tabacum
Nitab4.5_0011080g0020 Nicotiana tabacum
Nn2g10524 Nelumbo nucifera
Nn2g12853 Nelumbo nucifera
Oeu010006.1 Olea europaea
Oeu012681.1 Olea europaea
Oeu040282.1 Olea europaea
Os02g0503400 Oryza sativa ssp. japonica
Os04g0376000 Oryza sativa ssp. japonica
Os06g0732000 Oryza sativa ssp. japonica
Peaxi162Scf00015g00248 Petunia axillaris
Peaxi162Scf00060g00061 Petunia axillaris
Peaxi162Scf00411g00049 Petunia axillaris
PGR044G0278 Punica granatum
PGR119G2360 Punica granatum
PGR142G0292 Punica granatum
PGSC0003DMG400019019 Solanum tuberosum
PGSC0003DMG400023512 Solanum tuberosum
PGSC0003DMG400030185 Solanum tuberosum
PGSC0003DMG400030395 Solanum tuberosum
Phvul.007G009400 Phaseolus vulgaris
Phvul.L001643 Phaseolus vulgaris
Phvul.L001941 Phaseolus vulgaris
Potri.006G214100 Populus trichocarpa
Potri.006G214200 Populus trichocarpa
Potri.008G048800 Populus trichocarpa
Potri.010G212300 Populus trichocarpa
Pp3c13_5200 Physcomitrium patens
Pp3c15_25340 Physcomitrium patens
Pp3c26_13720 Physcomitrium patens
Pp3c3_2800 Physcomitrium patens
Pp3c4_30730 Physcomitrium patens
PRCOL_00007034 Prasinoderma coloniale
Prupe.2G139200 Prunus persica
Prupe.2G226300 Prunus persica
Prupe.6G086600 Prunus persica
Psat6g066080 Pisum sativum
Psat6g237680 Pisum sativum
Psat7g220200 Pisum sativum
PSO063G6509 Papaver somniferum
PSO339G0948 Papaver somniferum
PSO339G1479 Papaver somniferum
PSO384G2125 Papaver somniferum
PSO832G4183 Papaver somniferum
QL07p046556 Quercus lobata
QL08p057785 Quercus lobata
RcHm_v2.0_Chr1g0365321 Rosa chinensis
RcHm_v2.0_Chr2g0098001 Rosa chinensis
RcHm_v2.0_Chr5g0062471 Rosa chinensis
Rhsim09G0157700 Rhododendron simsii
Rhsim13G0087900 Rhododendron simsii
RhsimUnG0009100 Rhododendron simsii
Sabra06G0165000 Salix brachista
Sabra06G0165200 Salix brachista
Sabra08G0034800 Salix brachista
Sabra11G0018300 Salix brachista
Sabra13G0053300 Salix brachista
Sabra13G0103500 Salix brachista
SalBow3G2268 Salvia bowleyana
SalBow3G4658 Salvia bowleyana
SalBow6G6924 Salvia bowleyana
Sc20g0002400 Simmondsia chinensis
Sc20g0002410 Simmondsia chinensis
Sed0003312 Sechium edule
Sed0008705 Sechium edule
Sed0012801 Sechium edule
Sed0014808 Sechium edule
Sed0019500 Sechium edule
SEGI_09963 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30120 Striga asiatica
SGA_v2.0_scaffold181G39708 Striga asiatica
SGA_v2.0_scaffold220G42606 Striga asiatica
SGA_v2.0_scaffold80G25731 Striga asiatica
SHI06050 Sapria himalayana
SMO199G0118 Selaginella moellendorffii
SMO361G0698 Selaginella moellendorffii
SMO361G0811 Selaginella moellendorffii
Solyc01g010960.3 Solanum lycopersicum
Solyc04g010240.3 Solanum lycopersicum
Solyc06g075620.3 Solanum lycopersicum
Sopen01g006830 Solanum pennellii
Sopen02g002900 Solanum pennellii
Sopen02g002910 Solanum pennellii
Sopen04g004520 Solanum pennellii
Sopen04g005430 Solanum pennellii
Sopen05g033280 Solanum pennellii
Sopen06g032020 Solanum pennellii
Sopen06g034160 Solanum pennellii
Sp3g07860 Schrenkiella parvula
Sp4g21700 Schrenkiella parvula
Sp6g39900 Schrenkiella parvula
TAR157G0006 Trochodendron aralioides
TAR369G0212 Trochodendron aralioides
TAR633G2396 Trochodendron aralioides
TAR636G3391 Trochodendron aralioides
THA.LOC104810005 Tarenaya hassleriana
THA.LOC104816295 Tarenaya hassleriana
THA.LOC104823249 Tarenaya hassleriana
THA.LOC104824250 Tarenaya hassleriana
THA.LOC104825087 Tarenaya hassleriana
THA.LOC104827004 Tarenaya hassleriana
Thecc.05G047200 Theobroma cacao
Thecc.09G329400 Theobroma cacao
Thecc.10G059600 Theobroma cacao
Thhalv10010798m.g Eutrema salsugineum
Thhalv10015031m.g Eutrema salsugineum
Thhalv10017429m.g Eutrema salsugineum
Thhalv10021774m.g Eutrema salsugineum
TPR.G11740 Trifolium pratense
TPR.G14020 Trifolium pratense
TPR.G19961 Trifolium pratense
TPR.G38357 Trifolium pratense
TPR.G40089 Trifolium pratense
TWI15G1029 Tripterygium wilfordii
TWI31G1270 Tripterygium wilfordii
TWI63G0407 Tripterygium wilfordii
TWI79G0106 Tripterygium wilfordii
unitig_18.g30057 Utricularia gibba
unitig_578.g16245 Utricularia gibba
unitig_8.g4812 Utricularia gibba
vmacro03122 Vaccinium macrocarpon
VMungo0464G1121 Vigna mungo
VMungo0720G0264 Vigna mungo
VMungo0720G2509 Vigna mungo
VMungo0720G2594 Vigna mungo
VMungo1080G0969 Vigna mungo
VMungo1127G1840 Vigna mungo
VMungo1127G1876 Vigna mungo
Zm00001eb086050 Zea mays
Zm00001eb088030 Zea mays
Zm00001eb241550 Zea mays
Zm00001eb420570 Zea mays

User provided reference genes

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