Gene: AT3G55170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55170
  • Transcript Identifier AT3G55170.1
  • Gene Type Coding gene
  • Location Chr3 : 20453136-20454293 : negative

Gene Family Information

  • ID HOM05D001773
  • #Genes/#Species 367/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55170.1
  • uniprot Q9M3D2

Descriptions

  • Description Ribosomal L29 family protein
  • Computational description Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854), Ribosomal protein L29, conserved site (InterPro:IPR018254); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1); Has 1329 Blast hits to 1329 proteins in 532 species: Archae - 155; Bacteria - 387; Metazoa - 302; Fungi - 146; Plants - 143; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000463
IBA
IEA
Gene Ontologymaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1
GO:0000463
IEA
InterPromaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
IEA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IBA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
IEA
Gene Ontologycytosolic large ribosomal subunit1 2
GO:0022625
IEA
InterProcytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001854 Ribosomal protein L29/L35
IPR045059 60S ribosomal protein L35
IPR036049 Ribosomal protein L29/L35 superfamily
Mapman id Description
17.1.2.1.35 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL35