Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21340 Brassica napus
A01p37320 Brassica napus
A06p13230 Brassica napus
A08p30990 Brassica napus
A09p60490 Brassica napus
Aa31LG10G5870 Aethionema arabicum
Aa31LG7G2090 Aethionema arabicum
Aa31LG8G4040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2363 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.340 Anthoceros agrestis
Actinidia13363 Actinidia chinensis
Actinidia14261 Actinidia chinensis
Actinidia24421 Actinidia chinensis
Actinidia31146 Actinidia chinensis
Ah.08g217390 Amaranthus hybridus
Ah.13g071940 Amaranthus hybridus
Ah.15g094900 Amaranthus hybridus
AL1G29530 Arabidopsis lyrata
AL3G29980 Arabidopsis lyrata
AL7G38800 Arabidopsis lyrata
AL8G24660 Arabidopsis lyrata
Aqoxy2G02747 Aquilegia oxysepala
Aqoxy549s001 Aquilegia oxysepala
Aqoxy7G00928 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.158S68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2RYD9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6P8AS9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C412JQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FK8434 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JD5JQQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYV2K5 Arachis hypogaea
AT1G17280 Arabidopsis thaliana
AT3G17000 Arabidopsis thaliana
AT5G50430 Arabidopsis thaliana
ATR0099G071 Amborella trichopoda
ATR0796G190 Amborella trichopoda
Atru.chr1.4160 Acer truncatum
Atru.chr4.3016 Acer truncatum
AUR62001400 Chenopodium quinoa
AUR62016122 Chenopodium quinoa
AUR62025612 Chenopodium quinoa
AUR62041394 Chenopodium quinoa
AUR62043500 Chenopodium quinoa
AUR62043999 Chenopodium quinoa
BcaB03g13008 Brassica carinata
BcaB07g34036 Brassica carinata
BcaC05g25652 Brassica carinata
BcaC07g38844 Brassica carinata
BcaC07g41410 Brassica carinata
BcaC07g41430 Brassica carinata
BcaC09g48652 Brassica carinata
BcaC09g50319 Brassica carinata
BcaNung00213 Brassica carinata
BolC1t02610H Brassica oleracea
BolC1t04696H Brassica oleracea
BolC5t30274H Brassica oleracea
BolC8t49407H Brassica oleracea
BolC8t51946H Brassica oleracea
BraA01t02040Z Brassica rapa
BraA01t03790Z Brassica rapa
BraA06t24476Z Brassica rapa
BraA08t35028Z Brassica rapa
BraA09t41420Z Brassica rapa
C01p26690 Brassica napus
C01p47260 Brassica napus
C05p15670 Brassica napus
C08p17810 Brassica napus
C08p43970 Brassica napus
CAN.G1682.23 Capsicum annuum
CAN.G484.58 Capsicum annuum
CAN.G790.54 Capsicum annuum
CANSAT56G0906 Cannabis sativa
CANSAT78G2180 Cannabis sativa
CARHR017870 Cardamine hirsuta
CARHR092250 Cardamine hirsuta
CARHR222630 Cardamine hirsuta
CARHR257870 Cardamine hirsuta
CARHR274020 Cardamine hirsuta
Carub.0001s1704 Capsella rubella
Carub.0003s1675 Capsella rubella
Carub.0007s2527 Capsella rubella
Carub.0008s1054 Capsella rubella
Ca_21446_v3 Cicer arietinum L.
Ca_23449_v3 Cicer arietinum L.
CBR_g19546 Chara braunii
CBR_g29935 Chara braunii
Cc03_g00930 Coffea canephora
Cc04_g00660 Coffea canephora
CDE02G0105 Ceratophyllum demersum
CDE06G1983 Ceratophyllum demersum
CDE07G0536 Ceratophyllum demersum
CDE08G1047 Ceratophyllum demersum
Cfa003458 Carpinus fangiana
Cfa015326 Carpinus fangiana
Cfa025855 Carpinus fangiana
Ciclev10005518m.g Citrus clementina
Ciclev10026383m.g Citrus clementina
CiPaw.01G139100 Carya illinoinensis
CiPaw.01G211100 Carya illinoinensis
CiPaw.02G075700 Carya illinoinensis
CiPaw.02G130700 Carya illinoinensis
ClCG05G006510 Citrullus lanatus
ClCG07G014270 Citrullus lanatus
COL.COLO4_30874 Corchorus olitorius
COL.COLO4_34632 Corchorus olitorius
Cpa.g.sc25.198 Carica papaya
Cpa.g.sc9.71 Carica papaya
Cre03.g202897 Chlamydomonas reinhardtii
Cre08.g372400 Chlamydomonas reinhardtii
CsaV3_3G015120 Cucumis sativus L.
CsaV3_3G031050 Cucumis sativus L.
CSS0014848 Camellia sinensis var. sinensis
CSS0020178 Camellia sinensis var. sinensis
CSS0025062 Camellia sinensis var. sinensis
CSS0047464 Camellia sinensis var. sinensis
DCAR_007661 Daucus carota
DCAR_027001 Daucus carota
DCAR_030467 Daucus carota
DCAR_030475 Daucus carota
Dinv15187 Davidia involucrata
Dinv20378 Davidia involucrata
Dinv33122 Davidia involucrata
Dinv44292 Davidia involucrata
Duzib052G1178 Durio zibethinus
Duzib151G0474 Durio zibethinus
Duzib160G0016 Durio zibethinus
Duzib192G0575 Durio zibethinus
Duzib212G0357 Durio zibethinus
Duzib235G0145 Durio zibethinus
ECA232G0029 Erigeron canadensis
ECA246G2493 Erigeron canadensis
EL10Ac3g05476 Beta vulgaris
EL10Ac7g16497 Beta vulgaris
Eucgr.A00356 Eucalyptus grandis
Eucgr.J02593 Eucalyptus grandis
FAN02G4585 Fragaria x ananassa
FAN05G3900 Fragaria x ananassa
FAN07G1735 Fragaria x ananassa
FAN09G1109 Fragaria x ananassa
FAN12G2115 Fragaria x ananassa
FAN14G1964 Fragaria x ananassa
FAN14G5216 Fragaria x ananassa
FvH4_4g19560 Fragaria vesca
FvH4_6g35920 Fragaria vesca
Glyma.07G046200 Glycine max
Glyma.07G240600 Glycine max
Glyma.09G036300 Glycine max
Glyma.15G141200 Glycine max
Glyma.16G014400 Glycine max
Glyma.17G032800 Glycine max
Gohir.A06G142800 Gossypium hirsutum
Gohir.A09G234900 Gossypium hirsutum
Gohir.A10G048037 Gossypium hirsutum
Gohir.A10G171400 Gossypium hirsutum
Gohir.D05G314400 Gossypium hirsutum
Gohir.D06G148500 Gossypium hirsutum
Gohir.D07G051800 Gossypium hirsutum
Gohir.D09G235700 Gossypium hirsutum
Gohir.D10G051032 Gossypium hirsutum
Gohir.D10G178500 Gossypium hirsutum
Gorai.006G258700 Gossypium raimondii
Gorai.010G173000 Gossypium raimondii
Gorai.011G054900 Gossypium raimondii
Gorai.011G199600 Gossypium raimondii
GSVIVG01016663001 Vitis vinifera
GSVIVG01035008001 Vitis vinifera
HanXRQChr02g0048741 Helianthus annuus
HanXRQChr05g0148261 Helianthus annuus
HanXRQChr09g0277281 Helianthus annuus
HanXRQChr11g0353501 Helianthus annuus
HanXRQChr15g0466661 Helianthus annuus
Haze_01289 Corylus avellana
Haze_16140 Corylus avellana
Haze_26127 Corylus avellana
Hma1.2p1_0013F.1_g008660 Hydrangea macrophylla
Hma1.2p1_0078F.1_g039990 Hydrangea macrophylla
Hma1.2p1_0090F.1_g045760 Hydrangea macrophylla
Hma1.2p1_1999F.1_g310540 Hydrangea macrophylla
Hma1.2p1_2628F.1_g325685 Hydrangea macrophylla
HPP92_008952 Vanilla planifolia
HPP92_009327 Vanilla planifolia
Hund03118 Selenicereus undatus
Hund05701 Selenicereus undatus
Hund11964 Selenicereus undatus
Hund18634 Selenicereus undatus
Lalb_Chr04g0253961 Lupinus albus
Lalb_Chr04g0261251 Lupinus albus
Lalb_Chr15g0089241 Lupinus albus
Lalb_Chr17g0343191 Lupinus albus
Lalb_Chr18g0058741 Lupinus albus
Lj3A830T25 Lonicera japonica
Lj3g0026896 Lotus japonicus
Lj4g0019830 Lotus japonicus
Lj5A28G49 Lonicera japonica
Lj6C689T11 Lonicera japonica
Lj6g0011500 Lotus japonicus
Lj9A539T85 Lonicera japonica
Lsat_1_v5_gn_1_41000 Lactuca sativa
Lsat_1_v5_gn_4_90580 Lactuca sativa
Lsat_1_v5_gn_6_116240 Lactuca sativa
Manes.03G203400 Manihot esculenta
Manes.04G151300 Manihot esculenta
Manes.11G012300 Manihot esculenta
Manes.15G005200 Manihot esculenta
Mapoly0002s0227 Marchantia polymorpha
Mapoly0008s0153 Marchantia polymorpha
MBI13_g01656_MAGBIO Magnolia biondii
MBI19_g07231_MAGBIO Magnolia biondii
MBI19_g32874_MAGBIO Magnolia biondii
MCO12G395 Micromonas commoda
MCO14G158 Micromonas commoda
MD09G1172300 Malus domestica
MD13G1155700 Malus domestica
MD16G1155400 Malus domestica
MD17G1154600 Malus domestica
Medtr4g121960 Medicago truncatula
Medtr8g023380 Medicago truncatula
MELO3C006710.2 Cucumis melo
MELO3C022707.2 Cucumis melo
Migut.G00049 Erythranthe guttata
Migut.I01136 Erythranthe guttata
MSTRG.10147 Avicennia marina
MSTRG.10907 Avicennia marina
MSTRG.21773 Avicennia marina
MSTRG.24818 Avicennia marina
Nitab4.5_0002150g0220 Nicotiana tabacum
Nitab4.5_0006190g0040 Nicotiana tabacum
Nitab4.5_0006338g0070 Nicotiana tabacum
Nitab4.5_0006966g0050 Nicotiana tabacum
Nitab4.5_0009717g0020 Nicotiana tabacum
Nitab4.5_0013613g0010 Nicotiana tabacum
Nn1g01603 Nelumbo nucifera
Nn1g04497 Nelumbo nucifera
Nn2g11990 Nelumbo nucifera
Nn2g12682 Nelumbo nucifera
Nn3g19516 Nelumbo nucifera
Nn3g21703 Nelumbo nucifera
Nn4g25590 Nelumbo nucifera
Nn6g35743 Nelumbo nucifera
Nn8g41281 Nelumbo nucifera
Oeu003758.1 Olea europaea
Oeu006754.1 Olea europaea
Oeu015470.1 Olea europaea
Oeu019973.1 Olea europaea
Oeu031065.1 Olea europaea
Oeu032018.1 Olea europaea
Oeu039185.1 Olea europaea
Oeu046575.1 Olea europaea
Oeu053418.1 Olea europaea
Os03g0308000 Oryza sativa ssp. japonica
Os06g0193000 Oryza sativa ssp. japonica
Peaxi162Scf00017g00816 Petunia axillaris
Peaxi162Scf00038g02337 Petunia axillaris
Peaxi162Scf00207g01547 Petunia axillaris
Peaxi162Scf00228g00218 Petunia axillaris
PGR004G2896 Punica granatum
PGR031G3596 Punica granatum
PGR102G2367 Punica granatum
PGSC0003DMG400004699 Solanum tuberosum
PGSC0003DMG400009150 Solanum tuberosum
PGSC0003DMG401004867 Solanum tuberosum
Phvul.003G113800 Phaseolus vulgaris
Phvul.006G117400 Phaseolus vulgaris
Phvul.010G122800 Phaseolus vulgaris
Potri.001G162200 Populus trichocarpa
Potri.003G073100 Populus trichocarpa
Potri.008G106300 Populus trichocarpa
Potri.010G143900 Populus trichocarpa
Pp3c22_19100 Physcomitrium patens
Pp3c7_24370 Physcomitrium patens
PRCOL_00004337 Prasinoderma coloniale
PRCOL_00004800 Prasinoderma coloniale
PRCOL_00004928 Prasinoderma coloniale
Prupe.1G119000 Prunus persica
Prupe.3G030700 Prunus persica
Prupe.5G032100 Prunus persica
Prupe.5G033500 Prunus persica
Prupe.5G033600 Prunus persica
Prupe.6G047000 Prunus persica
Prupe.7G179700 Prunus persica
Prupe.7G179900 Prunus persica
Prupe.7G180100 Prunus persica
Prupe.7G180200 Prunus persica
Prupe.7G180600 Prunus persica
Psat4g024160 Pisum sativum
Psat4g164960 Pisum sativum
PSO135G0334 Papaver somniferum
PSO170G6117 Papaver somniferum
PSO210G3088 Papaver somniferum
PSO357G0012 Papaver somniferum
PSO724G0814 Papaver somniferum
PSO761G0142 Papaver somniferum
QL05p000874 Quercus lobata
QL05p001120 Quercus lobata
QL06p011803 Quercus lobata
RcHm_v2.0_Chr2g0148081 Rosa chinensis
RcHm_v2.0_Chr4g0424811 Rosa chinensis
Rhsim02G0004600 Rhododendron simsii
Rhsim08G0245100 Rhododendron simsii
Sabra01G0130400 Salix brachista
Sabra08G0080000 Salix brachista
Sabra10G0111100 Salix brachista
SalBow2G0520 Salvia bowleyana
SalBow5G2437 Salvia bowleyana
SalBow6G2824 Salvia bowleyana
Sc15g0004040 Simmondsia chinensis
Sc19g0003160 Simmondsia chinensis
Sed0008897 Sechium edule
Sed0009760 Sechium edule
Sed0012381 Sechium edule
Sed0018882 Sechium edule
SEGI_06866 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33304 Striga asiatica
SGA_v2.0_scaffold18G08401 Striga asiatica
SGA_v2.0_scaffold88G27316 Striga asiatica
SMO116G0349 Selaginella moellendorffii
SMO236G0070 Selaginella moellendorffii
SMO347G0576 Selaginella moellendorffii
Solyc03g123660.3 Solanum lycopersicum
Solyc06g063100.3 Solanum lycopersicum
Solyc12g099310.2 Solanum lycopersicum
Sopen03g041430 Solanum pennellii
Sopen06g022550 Solanum pennellii
Sopen12g033990 Solanum pennellii
Sp1g15410 Schrenkiella parvula
Sp3g15220 Schrenkiella parvula
Sp7g14760 Schrenkiella parvula
TAR362G0220 Trochodendron aralioides
TAR624G0656 Trochodendron aralioides
TAR626G1627 Trochodendron aralioides
TAR627G0048 Trochodendron aralioides
THA.LOC104812276 Tarenaya hassleriana
THA.LOC104813967 Tarenaya hassleriana
THA.LOC104818887 Tarenaya hassleriana
THA.LOC104820301 Tarenaya hassleriana
Thecc.04G299100 Theobroma cacao
Thecc.06G130700 Theobroma cacao
Thhalv10009625m.g Eutrema salsugineum
Thhalv10014520m.g Eutrema salsugineum
Thhalv10015054m.g Eutrema salsugineum
Thhalv10021196m.g Eutrema salsugineum
Thhalv10025677m.g Eutrema salsugineum
TPR.G11433 Trifolium pratense
TPR.G16843 Trifolium pratense
TPR.G27262 Trifolium pratense
TPR.G29473 Trifolium pratense
TPR.G40306 Trifolium pratense
TWI09G0044 Tripterygium wilfordii
TWI14G1006 Tripterygium wilfordii
TWI23G0186 Tripterygium wilfordii
TWI53G1778 Tripterygium wilfordii
TWI73G0756 Tripterygium wilfordii
unitig_22.g6343 Utricularia gibba
unitig_26.g8911 Utricularia gibba
unitig_8.g3091 Utricularia gibba
vmacro02402 Vaccinium macrocarpon
vmacro15187 Vaccinium macrocarpon
vmacro18718 Vaccinium macrocarpon
vmacro18772 Vaccinium macrocarpon
vmacro22013 Vaccinium macrocarpon
VMungo0331G1763 Vigna mungo
VMungo0540G0586 Vigna mungo
VMungo1215G0747 Vigna mungo
Zm00001eb014740 Zea mays
Zm00001eb028890 Zea mays
Zm00001eb171360 Zea mays
Zm00001eb210040 Zea mays
Zm00001eb241260 Zea mays
Zm00001eb278450 Zea mays
Zm00001eb315560 Zea mays
Zm00001eb329650 Zea mays
Zm00001eb367340 Zea mays
Zm00001eb374150 Zea mays
Zm00001eb396060 Zea mays
Zm00001eb399730 Zea mays

User provided reference genes

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