Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00820 Brassica napus
A03p45270 Brassica napus
A03p65790 Brassica napus
A05p43480 Brassica napus
A06p32900 Brassica napus
A08p23190 Brassica napus
A09p10490 Brassica napus
Aa31LG1G16070 Aethionema arabicum
Aa31LG5G14480 Aethionema arabicum
Aa31LG6G15330 Aethionema arabicum
Aa31LG8G12790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2018 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.257__258 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.373 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2818 Anthoceros agrestis
Actinidia16428 Actinidia chinensis
Actinidia22082 Actinidia chinensis
Actinidia30552 Actinidia chinensis
Actinidia32840 Actinidia chinensis
Ah.03g140540 Amaranthus hybridus
AL3G13790 Arabidopsis lyrata
AL3G46480 Arabidopsis lyrata
AL7G12190 Arabidopsis lyrata
AL8G43780 Arabidopsis lyrata
Aqoxy1G00483 Aquilegia oxysepala
Aqoxy5G00872 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1W779N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PRW0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFDA09 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U78PA8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XY76Y6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0PJVS Arachis hypogaea
AT2G14750 Arabidopsis thaliana
AT3G03900 Arabidopsis thaliana
AT4G39940 Arabidopsis thaliana
AT5G67520 Arabidopsis thaliana
ATR1153G097 Amborella trichopoda
Atru.chr2.1388 Acer truncatum
Atru.chr3.1006 Acer truncatum
AUR62004006 Chenopodium quinoa
AUR62032052 Chenopodium quinoa
AUR62032695 Chenopodium quinoa
AUR62040241 Chenopodium quinoa
BcaB02g09916 Brassica carinata
BcaB02g11537 Brassica carinata
BcaB03g12295 Brassica carinata
BcaB04g20047 Brassica carinata
BcaB08g34569 Brassica carinata
BcaC01g00331 Brassica carinata
BcaC01g03090 Brassica carinata
BcaC04g23069 Brassica carinata
BcaC04g23233 Brassica carinata
BcaC05g29893 Brassica carinata
BcaC05g30243 Brassica carinata
BcaC05g30292 Brassica carinata
BcaNung00915 Brassica carinata
BcaNung03406 Brassica carinata
BcaNung06389 Brassica carinata
BolC1t00093H Brassica oleracea
BolC3t17899H Brassica oleracea
BolC3t18221H Brassica oleracea
BolC3t20107H Brassica oleracea
BolC5t34967H Brassica oleracea
BolC7t46691H Brassica oleracea
BolC9t53980H Brassica oleracea
BolC9t54139H Brassica oleracea
BraA01t00084Z Brassica rapa
BraA03t13660Z Brassica rapa
BraA03t15632Z Brassica rapa
BraA05t23087Z Brassica rapa
BraA06t26221Z Brassica rapa
BraA08t34277Z Brassica rapa
BraA09t36694Z Brassica rapa
C01p00930 Brassica napus
C03p56120 Brassica napus
C03p59570 Brassica napus
C03p78550 Brassica napus
C07p62770 Brassica napus
C09p10870 Brassica napus
C09p12460 Brassica napus
CAN.G1075.33 Capsicum annuum
CAN.G128.62 Capsicum annuum
CAN.G775.9 Capsicum annuum
CANSAT01G2425 Cannabis sativa
CANSAT25G2073 Cannabis sativa
CARHR078020 Cardamine hirsuta
CARHR246760 Cardamine hirsuta
CARHR280070 Cardamine hirsuta
CARHR286460 Cardamine hirsuta
Carub.0003s0314 Capsella rubella
Carub.0003s2878 Capsella rubella
Carub.0007s0188 Capsella rubella
Carub.0008s2695 Capsella rubella
Ca_08268_v3 Cicer arietinum L.
Ca_22108_v3 Cicer arietinum L.
Ca_22115_v3 Cicer arietinum L.
Ca_24695_v3 Cicer arietinum L.
CBR_g28654 Chara braunii
Cc06_g23010 Coffea canephora
Cc07_g07070 Coffea canephora
CDE06G1587 Ceratophyllum demersum
Cfa004128 Carpinus fangiana
Cfa004663 Carpinus fangiana
Cfa016445 Carpinus fangiana
Cfa026598 Carpinus fangiana
Ciclev10022273m.g Citrus clementina
Ciclev10026239m.g Citrus clementina
CiPaw.01G004800 Carya illinoinensis
CiPaw.05G018100 Carya illinoinensis
CiPaw.09G002100 Carya illinoinensis
ClCG01G017560 Citrullus lanatus
ClCG10G010250 Citrullus lanatus
ClCG10G013390 Citrullus lanatus
COL.COLO4_11572 Corchorus olitorius
COL.COLO4_11573 Corchorus olitorius
COL.COLO4_13593 Corchorus olitorius
Cpa.g.sc106.46 Carica papaya
Cpa.g.sc51.118 Carica papaya
Cpa.g.sc6.21 Carica papaya
Cpa.g.sc752.4 Carica papaya
Cre16.g677500 Chlamydomonas reinhardtii
CsaV3_3G043250 Cucumis sativus L.
CsaV3_4G000200 Cucumis sativus L.
CsaV3_6G044100 Cucumis sativus L.
CSS0004311 Camellia sinensis var. sinensis
CSS0010676 Camellia sinensis var. sinensis
CSS0015234 Camellia sinensis var. sinensis
DCAR_010821 Daucus carota
DCAR_013686 Daucus carota
Dinv04051 Davidia involucrata
Dinv26927 Davidia involucrata
Dinv37017 Davidia involucrata
Duzib106G1802 Durio zibethinus
Duzib128G1240 Durio zibethinus
Duzib147G1052 Durio zibethinus
Duzib177G0513 Durio zibethinus
Duzib177G0855 Durio zibethinus
Duzib187G0930 Durio zibethinus
ECA233G4150 Erigeron canadensis
ECA238G2391 Erigeron canadensis
ECA246G1468 Erigeron canadensis
EL10Ac3g06822 Beta vulgaris
EL10Ac6g15622 Beta vulgaris
Eucgr.A02099 Eucalyptus grandis
Eucgr.H02306 Eucalyptus grandis
FAN15G0974 Fragaria x ananassa
FAN19G2035 Fragaria x ananassa
FAN20G0294 Fragaria x ananassa
FAN23G0291 Fragaria x ananassa
FAN23G2641 Fragaria x ananassa
FAN24G1279 Fragaria x ananassa
FAN26G1723 Fragaria x ananassa
FAN26G2890 Fragaria x ananassa
FAN27G1384 Fragaria x ananassa
FAN28G0637 Fragaria x ananassa
FAN28G1685 Fragaria x ananassa
FvH4_1g17660 Fragaria vesca
FvH4_1g28150 Fragaria vesca
FvH4_2g04460 Fragaria vesca
Glyma.01G193950 Glycine max
Glyma.01G194000 Glycine max
Glyma.05G105300 Glycine max
Glyma.11G047900 Glycine max
Glyma.16G040900 Glycine max
Glyma.17G161100 Glycine max
Glyma.19G112200 Glycine max
Gohir.A02G151800 Gossypium hirsutum
Gohir.A11G215150 Gossypium hirsutum
Gohir.A11G296300 Gossypium hirsutum
Gohir.A12G077100 Gossypium hirsutum
Gohir.A13G172100 Gossypium hirsutum
Gohir.D03G028600 Gossypium hirsutum
Gohir.D11G208200 Gossypium hirsutum
Gohir.D11G310600 Gossypium hirsutum
Gohir.D12G075300 Gossypium hirsutum
Gohir.D13G178000 Gossypium hirsutum
Gorai.003G030100 Gossypium raimondii
Gorai.007G223200 Gossypium raimondii
Gorai.007G343200 Gossypium raimondii
Gorai.008G083800 Gossypium raimondii
Gorai.013G203300 Gossypium raimondii
GSVIVG01000111001 Vitis vinifera
GSVIVG01000120001 Vitis vinifera
GSVIVG01033406001 Vitis vinifera
GSVIVG01037835001 Vitis vinifera
HanXRQChr05g0130381 Helianthus annuus
HanXRQChr11g0350871 Helianthus annuus
HanXRQChr12g0376331 Helianthus annuus
HanXRQChr13g0397701 Helianthus annuus
HanXRQChr15g0472651 Helianthus annuus
Haze_10260 Corylus avellana
Haze_15286 Corylus avellana
Haze_19422 Corylus avellana
Hma1.2p1_0152F.1_g067710 Hydrangea macrophylla
Hma1.2p1_0479F.1_g161620 Hydrangea macrophylla
Hma1.2p1_0808F.1_g221610 Hydrangea macrophylla
Hma1.2p1_0852F.1_g228460 Hydrangea macrophylla
Hma1.2p1_3081F.1_g332450 Hydrangea macrophylla
Hma1.2p1_3538F.1_g336660 Hydrangea macrophylla
HPP92_009489 Vanilla planifolia
HPP92_009543 Vanilla planifolia
HPP92_014232 Vanilla planifolia
HPP92_026493 Vanilla planifolia
Hund13951 Selenicereus undatus
Hund16398 Selenicereus undatus
Hund24833 Selenicereus undatus
Lalb_Chr05g0225881 Lupinus albus
Lalb_Chr09g0323591 Lupinus albus
Lalb_Chr14g0364501 Lupinus albus
Lalb_Chr14g0364511 Lupinus albus
Lalb_Chr16g0376291 Lupinus albus
Lj1g0020420 Lotus japonicus
Lj1g0027563 Lotus japonicus
Lj2g0015524 Lotus japonicus
Lj4A163T71 Lonicera japonica
Lj4g0021358 Lotus japonicus
Lj8C584G0 Lonicera japonica
Lsat_1_v5_gn_2_83321 Lactuca sativa
Lsat_1_v5_gn_3_86160 Lactuca sativa
Lsat_1_v5_gn_6_37300 Lactuca sativa
Lsat_1_v5_gn_7_74021 Lactuca sativa
Lsat_1_v5_gn_8_27761 Lactuca sativa
Manes.08G144500 Manihot esculenta
Manes.09G141100 Manihot esculenta
Manes.10G083700 Manihot esculenta
Manes.12G113800 Manihot esculenta
Manes.13G111900 Manihot esculenta
Mapoly0001s0168 Marchantia polymorpha
Mapoly0151s0024 Marchantia polymorpha
MBI01_g13085_MAGBIO Magnolia biondii
MBI16_g07982_MAGBIO Magnolia biondii
MCO01G791 Micromonas commoda
MD02G1185400 Malus domestica
MD05G1100600 Malus domestica
MD10G1105800 Malus domestica
MD11G1100500 Malus domestica
MD12G1003900 Malus domestica
MD14G1002700 Malus domestica
MD15G1297000 Malus domestica
MD15G1430000 Malus domestica
Medtr4g097010 Medicago truncatula
Medtr5g015530 Medicago truncatula
Medtr7g085650 Medicago truncatula
MELO3C000465.2 Cucumis melo
MELO3C007632.2 Cucumis melo
MELO3C008444.2 Cucumis melo
MELO3C012940.2 Cucumis melo
MELO3C017519.2 Cucumis melo
MELO3C018012.2 Cucumis melo
MELO3C026885.2 Cucumis melo
MELO3C027505.2 Cucumis melo
MELO3C031763.2 Cucumis melo
Migut.K00007 Erythranthe guttata
Migut.L00216 Erythranthe guttata
MSTRG.10860 Avicennia marina
MSTRG.15352 Avicennia marina
Nitab4.5_0000036g0050 Nicotiana tabacum
Nitab4.5_0000142g0020 Nicotiana tabacum
Nitab4.5_0000394g0020 Nicotiana tabacum
Nitab4.5_0000626g0070 Nicotiana tabacum
Nitab4.5_0001079g0180 Nicotiana tabacum
Nitab4.5_0002119g0120 Nicotiana tabacum
Nitab4.5_0009367g0010 Nicotiana tabacum
Nitab4.5_0010836g0020 Nicotiana tabacum
Nn1g04558 Nelumbo nucifera
Nn2g15865 Nelumbo nucifera
Nn5g30583 Nelumbo nucifera
Nn7g35854 Nelumbo nucifera
Oeu013319.1 Olea europaea
Oeu014245.1 Olea europaea
Oeu014246.1 Olea europaea
Oeu017645.2 Olea europaea
Oeu048433.1 Olea europaea
Oeu054195.1 Olea europaea
Os03g0202001 Oryza sativa ssp. japonica
Os07g0573100 Oryza sativa ssp. japonica
Os11g0634800 Oryza sativa ssp. japonica
Peaxi162Scf00249g00719 Petunia axillaris
Peaxi162Scf00449g00313 Petunia axillaris
Peaxi162Scf00463g00014 Petunia axillaris
Peaxi162Scf00548g00648 Petunia axillaris
PGR042G0262 Punica granatum
PGR102G2084 Punica granatum
PGSC0003DMG400003318 Solanum tuberosum
PGSC0003DMG400021446 Solanum tuberosum
PGSC0003DMG400023663 Solanum tuberosum
Phvul.001G111000 Phaseolus vulgaris
Phvul.002G010900 Phaseolus vulgaris
Phvul.003G235300 Phaseolus vulgaris
Potri.001G293400 Populus trichocarpa
Potri.009G088100 Populus trichocarpa
Potri.013G057900 Populus trichocarpa
Pp3c10_2670 Physcomitrium patens
Pp3c23_21010 Physcomitrium patens
Pp3c24_11970 Physcomitrium patens
Pp3c2_19640 Physcomitrium patens
PRCOL_00000153 Prasinoderma coloniale
Prupe.6G221200 Prunus persica
Prupe.7G004400 Prunus persica
Prupe.8G145000 Prunus persica
Psat0s1971g0360 Pisum sativum
Psat2g171480 Pisum sativum
Psat4g082000 Pisum sativum
PSO017G6474 Papaver somniferum
PSO170G0740 Papaver somniferum
PSO339G3322 Papaver somniferum
PSO384G5135 Papaver somniferum
QL07p018306 Quercus lobata
QL11p030465 Quercus lobata
RcHm_v2.0_Chr2g0107981 Rosa chinensis
RcHm_v2.0_Chr3g0497061 Rosa chinensis
RcHm_v2.0_Chr6g0253831 Rosa chinensis
Rhsim08G0093700 Rhododendron simsii
Sabra13G0051500 Salix brachista
Sabra16G0183300 Salix brachista
SalBow5G3056 Salvia bowleyana
SalBow5G3476 Salvia bowleyana
SalBow6G6032 Salvia bowleyana
Sc16g0002900 Simmondsia chinensis
Sc19g0006440 Simmondsia chinensis
Sed0003357 Sechium edule
Sed0009291 Sechium edule
Sed0015268 Sechium edule
Sed0015770 Sechium edule
Sed0021142 Sechium edule
SEGI_40361 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06406 Striga asiatica
SGA_v2.0_scaffold90G27719 Striga asiatica
SGA_v2.0_scaffold94G28402 Striga asiatica
SMO119G0379 Selaginella moellendorffii
SMO337G0036 Selaginella moellendorffii
SMO367G0161 Selaginella moellendorffii
Solyc02g064650.3 Solanum lycopersicum
Solyc02g092410.3 Solanum lycopersicum
Solyc10g080680.3 Solanum lycopersicum
Sopen02g014750 Solanum pennellii
Sopen02g036960 Solanum pennellii
Sopen10g031220 Solanum pennellii
Sp2g29130 Schrenkiella parvula
Sp3g02870 Schrenkiella parvula
Sp3g27920 Schrenkiella parvula
Sp7g35950 Schrenkiella parvula
TAR623G1634 Trochodendron aralioides
TAR628G0218 Trochodendron aralioides
THA.LOC104807216 Tarenaya hassleriana
THA.LOC104819529 Tarenaya hassleriana
THA.LOC104820774 Tarenaya hassleriana
THA.LOC104821201 Tarenaya hassleriana
THA.LOC104824878 Tarenaya hassleriana
Thecc.01G072300 Theobroma cacao
Thecc.02G211000 Theobroma cacao
Thecc.05G294900 Theobroma cacao
Thecc.05G295200 Theobroma cacao
Thecc.05G296100 Theobroma cacao
Thecc.05G296400 Theobroma cacao
Thhalv10004693m.g Eutrema salsugineum
Thhalv10021488m.g Eutrema salsugineum
Thhalv10022805m.g Eutrema salsugineum
Thhalv10025861m.g Eutrema salsugineum
TPR.G24229 Trifolium pratense
TPR.G34854 Trifolium pratense
TPR.G5859 Trifolium pratense
TWI09G0994 Tripterygium wilfordii
TWI14G0342 Tripterygium wilfordii
TWI59G1184 Tripterygium wilfordii
TWI73G1078 Tripterygium wilfordii
unitig_736.g22478 Utricularia gibba
vmacro12566 Vaccinium macrocarpon
vmacro18026 Vaccinium macrocarpon
VMungo0251G2360 Vigna mungo
VMungo1215G2007 Vigna mungo
VMungo1383G3601 Vigna mungo
Zm00001eb107420 Zea mays
Zm00001eb166390 Zea mays
Zm00001eb325100 Zea mays
Zm00001eb400760 Zea mays

User provided reference genes

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