Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03650 Brassica napus
A04p03660 Brassica napus
A04p03670 Brassica napus
A04p03710 Brassica napus
A04p03720 Brassica napus
A04p31440 Brassica napus
A05p02160 Brassica napus
A07p08730 Brassica napus
A07p08740 Brassica napus
A07p23180 Brassica napus
A07p23190 Brassica napus
A09p49890 Brassica napus
A09p49900 Brassica napus
A09p49910 Brassica napus
Aa31LG10G11850 Aethionema arabicum
Aa31LG10G11880 Aethionema arabicum
Actinidia38158 Actinidia chinensis
Ah.02g112470 Amaranthus hybridus
Ah.04g151020 Amaranthus hybridus
Ah.04g151030 Amaranthus hybridus
Ah.11g049020 Amaranthus hybridus
Ah.13g076890 Amaranthus hybridus
AL4G39220 Arabidopsis lyrata
AL5G38400 Arabidopsis lyrata
AL5G38420 Arabidopsis lyrata
AL5G38430 Arabidopsis lyrata
AL6G13770 Arabidopsis lyrata
Aqoxy2G00372 Aquilegia oxysepala
Aqoxy2G00373 Aquilegia oxysepala
Aqoxy4G00497 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H3TEND Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9FWK3 Arachis hypogaea
AT2G41240 Arabidopsis thaliana
AT3G56970 Arabidopsis thaliana
AT3G56980 Arabidopsis thaliana
AT5G04150 Arabidopsis thaliana
ATR0665G004 Amborella trichopoda
ATR0745G088 Amborella trichopoda
Atru.chr1.1450 Acer truncatum
Atru.chr1.1451 Acer truncatum
AUR62011773 Chenopodium quinoa
AUR62017199 Chenopodium quinoa
AUR62018341 Chenopodium quinoa
AUR62024616 Chenopodium quinoa
AUR62030326 Chenopodium quinoa
AUR62030329 Chenopodium quinoa
AUR62030330 Chenopodium quinoa
AUR62030331 Chenopodium quinoa
AUR62031984 Chenopodium quinoa
AUR62031985 Chenopodium quinoa
AUR62031986 Chenopodium quinoa
AUR62031987 Chenopodium quinoa
BcaB01g03849 Brassica carinata
BcaB01g05768 Brassica carinata
BcaB01g05769 Brassica carinata
BcaB01g05771 Brassica carinata
BcaB01g05884 Brassica carinata
BcaB02g07628 Brassica carinata
BcaB02g07629 Brassica carinata
BcaB02g07630 Brassica carinata
BcaB02g08337 Brassica carinata
BcaB02g08338 Brassica carinata
BcaB02g08339 Brassica carinata
BcaB05g22945 Brassica carinata
BcaB05g22947 Brassica carinata
BcaB06g26522 Brassica carinata
BcaB06g26528 Brassica carinata
BcaC02g09883 Brassica carinata
BcaC02g09884 Brassica carinata
BcaC02g09887 Brassica carinata
BcaC02g09890 Brassica carinata
BcaC02g12765 Brassica carinata
BcaC02g12888 Brassica carinata
BcaC06g35555 Brassica carinata
BcaC06g35556 Brassica carinata
BcaC07g40012 Brassica carinata
BcaC07g40013 Brassica carinata
BcaC07g40014 Brassica carinata
BcaC07g40015 Brassica carinata
BcaC07g40089 Brassica carinata
BcaC07g40090 Brassica carinata
BcaC07g40091 Brassica carinata
BcaC07g40092 Brassica carinata
BcaC07g40093 Brassica carinata
BcaC07g40094 Brassica carinata
BcaC07g40098 Brassica carinata
BcaC07g40099 Brassica carinata
BcaC07g40100 Brassica carinata
BcaC08g44814 Brassica carinata
BcaC08g44815 Brassica carinata
BcaC08g44816 Brassica carinata
BolC3t12742H Brassica oleracea
BolC4t25107H Brassica oleracea
BolC4t25109H Brassica oleracea
BolC4t25247H Brassica oleracea
BolC4t25248H Brassica oleracea
BolC4t25250H Brassica oleracea
BolC4t28389H Brassica oleracea
BolC6t37561H Brassica oleracea
BolC6t37562H Brassica oleracea
BolC7t41850H Brassica oleracea
BolC7t41852H Brassica oleracea
BolC8t50841H Brassica oleracea
BolC8t50842H Brassica oleracea
BolC8t50843H Brassica oleracea
BraA01t02607Z Brassica rapa
BraA04t16063Z Brassica rapa
BraA04t16068Z Brassica rapa
BraA04t16069Z Brassica rapa
BraA04t16070Z Brassica rapa
BraA04t18601Z Brassica rapa
BraA05t19212Z Brassica rapa
BraA07t28661Z Brassica rapa
BraA07t28662Z Brassica rapa
BraA07t29982Z Brassica rapa
BraA07t29983Z Brassica rapa
BraA09t40440Z Brassica rapa
BraA09t40441Z Brassica rapa
BraA09t40442Z Brassica rapa
C02p24740 Brassica napus
C03p01890 Brassica napus
C04p02570 Brassica napus
C04p29330 Brassica napus
C04p35500 Brassica napus
C04p35520 Brassica napus
C04p35540 Brassica napus
C04p35570 Brassica napus
C04p35580 Brassica napus
C04p68850 Brassica napus
C06p23960 Brassica napus
C06p23990 Brassica napus
C06p24000 Brassica napus
C06p24010 Brassica napus
C07p13560 Brassica napus
C07p13570 Brassica napus
C08p32250 Brassica napus
C08p32280 Brassica napus
C08p32290 Brassica napus
CAN.G641.58 Capsicum annuum
CAN.G641.59 Capsicum annuum
CANSAT11G0251 Cannabis sativa
CANSAT11G2534 Cannabis sativa
CANSAT64G0196 Cannabis sativa
CANSAT64G2277 Cannabis sativa
CANSAT64G2931 Cannabis sativa
CANSAT64G2975 Cannabis sativa
CARHR136330 Cardamine hirsuta
CARHR167120 Cardamine hirsuta
CARHR167130 Cardamine hirsuta
CARHR209120 Cardamine hirsuta
Carub.0004s2356 Capsella rubella
Carub.0005s2371 Capsella rubella
Carub.0005s2372 Capsella rubella
Carub.0006s0310 Capsella rubella
Ca_26784_v3 Cicer arietinum L.
Cc06_g19110 Coffea canephora
CDE08G0857 Ceratophyllum demersum
Cfa020009 Carpinus fangiana
Cfa020011 Carpinus fangiana
Cfa020502 Carpinus fangiana
Ciclev10001998m.g Citrus clementina
Ciclev10006413m.g Citrus clementina
CiPaw.09G047100 Carya illinoinensis
CiPaw.10G039600 Carya illinoinensis
CiPaw.11G177100 Carya illinoinensis
CiPaw.12G123000 Carya illinoinensis
ClCG04G004330 Citrullus lanatus
ClCG04G004340 Citrullus lanatus
ClCG04G004360 Citrullus lanatus
COL.COLO4_07587 Corchorus olitorius
COL.COLO4_07588 Corchorus olitorius
COL.COLO4_07589 Corchorus olitorius
Cpa.g.sc5.178 Carica papaya
Cpa.g.sc5.179 Carica papaya
Cpa.g.sc5.180 Carica papaya
CsaV3_4G029740 Cucumis sativus L.
CsaV3_4G029750 Cucumis sativus L.
CsaV3_6G037460 Cucumis sativus L.
CSS0009166 Camellia sinensis var. sinensis
CSS0022304 Camellia sinensis var. sinensis
DCAR_020561 Daucus carota
DCAR_020568 Daucus carota
DCAR_020569 Daucus carota
Dinv09479 Davidia involucrata
Dinv12050 Davidia involucrata
Duzib093G1883 Durio zibethinus
Duzib170G0503 Durio zibethinus
ECA248G0855 Erigeron canadensis
ECA248G2849 Erigeron canadensis
ECA248G3607 Erigeron canadensis
EL10Ac3g07220 Beta vulgaris
EL10Ac3g07221 Beta vulgaris
EL10Ac3g07224 Beta vulgaris
EL10Ac3g07228 Beta vulgaris
EL10As5g23565 Beta vulgaris
Eucgr.A02250 Eucalyptus grandis
Eucgr.B01225 Eucalyptus grandis
Eucgr.B01226 Eucalyptus grandis
FAN03G2766 Fragaria x ananassa
FAN06G1474 Fragaria x ananassa
FAN15G1141 Fragaria x ananassa
FAN24G2962 Fragaria x ananassa
FvH4_2g11650 Fragaria vesca
FvH4_7g03950 Fragaria vesca
Glyma.03G130400 Glycine max
Glyma.03G130600 Glycine max
Glyma.19G132500 Glycine max
Gohir.A05G069200 Gossypium hirsutum
Gohir.A09G106500 Gossypium hirsutum
Gohir.A11G307400 Gossypium hirsutum
Gohir.A13G035300 Gossypium hirsutum
Gohir.D05G072100 Gossypium hirsutum
Gohir.D09G103200 Gossypium hirsutum
Gohir.D11G322900 Gossypium hirsutum
Gohir.D13G033700 Gossypium hirsutum
Gorai.006G120300 Gossypium raimondii
Gorai.007G353000 Gossypium raimondii
Gorai.009G073100 Gossypium raimondii
Gorai.013G038100 Gossypium raimondii
GSVIVG01022881001 Vitis vinifera
GSVIVG01027323001 Vitis vinifera
GSVIVG01033618001 Vitis vinifera
GSVIVG01034621001 Vitis vinifera
HanXRQChr10g0298681 Helianthus annuus
HanXRQChr10g0298701 Helianthus annuus
HanXRQChr10g0298711 Helianthus annuus
HanXRQChr10g0298721 Helianthus annuus
HanXRQChr13g0393541 Helianthus annuus
HanXRQChr13g0393561 Helianthus annuus
HanXRQChr13g0399001 Helianthus annuus
HanXRQChr13g0399021 Helianthus annuus
HanXRQChr13g0399031 Helianthus annuus
Haze_09539 Corylus avellana
Haze_20211 Corylus avellana
Haze_20215 Corylus avellana
Haze_20216 Corylus avellana
Haze_20218 Corylus avellana
Haze_20220 Corylus avellana
Hma1.2p1_0553F.1_g177780 Hydrangea macrophylla
HPP92_003244 Vanilla planifolia
Hund09655 Selenicereus undatus
Hund09656 Selenicereus undatus
Hund24593 Selenicereus undatus
Hund24596 Selenicereus undatus
Hund24597 Selenicereus undatus
Hund24599 Selenicereus undatus
Lalb_Chr20g0110191 Lupinus albus
Lalb_Chr25g0286951 Lupinus albus
Lalb_Chr25g0286961 Lupinus albus
Lj1A1094T41 Lonicera japonica
Lj1g0014872 Lotus japonicus
Lj1g0017441 Lotus japonicus
Lj1g0019186 Lotus japonicus
Lj1g0024560 Lotus japonicus
Lj1P1092T11 Lonicera japonica
Lsat_1_v5_gn_5_158120 Lactuca sativa
Lsat_1_v5_gn_5_158220 Lactuca sativa
Lsat_1_v5_gn_5_158260 Lactuca sativa
Lsat_1_v5_gn_5_158300 Lactuca sativa
Lsat_1_v5_gn_5_158400 Lactuca sativa
Manes.08G058700 Manihot esculenta
MBI13_g17980_MAGBIO Magnolia biondii
MBI19_g25616_MAGBIO Magnolia biondii
MD14G1086500 Malus domestica
MD14G1086600 Malus domestica
Medtr1g048710 Medicago truncatula
Medtr1g048720 Medicago truncatula
Medtr1g048750 Medicago truncatula
Medtr7g090410 Medicago truncatula
MELO3C019064.2 Cucumis melo
MELO3C019065.2 Cucumis melo
MELO3C031137.2 Cucumis melo
Migut.B00824 Erythranthe guttata
Migut.B00825 Erythranthe guttata
Migut.C00090 Erythranthe guttata
Migut.J01664 Erythranthe guttata
MSTRG.19813 Avicennia marina
Nitab4.5_0000571g0190 Nicotiana tabacum
Nitab4.5_0000571g0230 Nicotiana tabacum
Nitab4.5_0001167g0080 Nicotiana tabacum
Nitab4.5_0004773g0010 Nicotiana tabacum
Nitab4.5_0006081g0010 Nicotiana tabacum
Nn1g08853 Nelumbo nucifera
Nn5g28329 Nelumbo nucifera
Nn5g28334 Nelumbo nucifera
Nn7g36675 Nelumbo nucifera
Oeu008219.1 Olea europaea
Oeu008221.1 Olea europaea
Oeu008222.1 Olea europaea
Oeu008226.1 Olea europaea
Oeu008903.1 Olea europaea
Oeu015073.1 Olea europaea
Oeu024976.1 Olea europaea
Oeu025859.2 Olea europaea
Oeu053423.1 Olea europaea
Oeu063776.1 Olea europaea
Oeu063777.1 Olea europaea
Os01g0952800 Oryza sativa ssp. japonica
Peaxi162Scf00772g00048 Petunia axillaris
Peaxi162Scf00772g00049 Petunia axillaris
Peaxi162Scf00772g00076 Petunia axillaris
Peaxi162Scf00772g00410 Petunia axillaris
PGR031G2314 Punica granatum
PGSC0003DMG400029853 Solanum tuberosum
PGSC0003DMG400029855 Solanum tuberosum
Phvul.001G126400 Phaseolus vulgaris
Potri.006G037200 Populus trichocarpa
Potri.006G037600 Populus trichocarpa
Potri.016G037300 Populus trichocarpa
Prupe.1G213700 Prunus persica
Prupe.3G165100 Prunus persica
Prupe.7G039800 Prunus persica
Prupe.7G039900 Prunus persica
Prupe.7G040100 Prunus persica
Prupe.7G040300 Prunus persica
Prupe.7G040500 Prunus persica
Psat3g076480 Pisum sativum
Psat3g076560 Pisum sativum
Psat3g076680 Pisum sativum
Psat6g049440 Pisum sativum
PSO135G0141 Papaver somniferum
PSO339G3446 Papaver somniferum
PSO384G0562 Papaver somniferum
QL02p099184 Quercus lobata
QL07p009901 Quercus lobata
QL08p015482 Quercus lobata
QL08p016010 Quercus lobata
RcHm_v2.0_Chr1g0321521 Rosa chinensis
RcHm_v2.0_Chr6g0270891 Rosa chinensis
Sabra03G0010500 Salix brachista
Sabra06G0025300 Salix brachista
Sabra06G0025500 Salix brachista
SalBow6G1767 Salvia bowleyana
Sc05g0000290 Simmondsia chinensis
Sc13g0001180 Simmondsia chinensis
Sc13g0001190 Simmondsia chinensis
Sc25g0005420 Simmondsia chinensis
Sed0013012 Sechium edule
Sed0024572 Sechium edule
Sed0026434 Sechium edule
SEGI_02288 Sequoiadendron giganteum
SEGI_06065 Sequoiadendron giganteum
SEGI_06322 Sequoiadendron giganteum
SEGI_06900 Sequoiadendron giganteum
SEGI_21465 Sequoiadendron giganteum
SEGI_25382 Sequoiadendron giganteum
SEGI_32268 Sequoiadendron giganteum
SEGI_36232 Sequoiadendron giganteum
SEGI_37590 Sequoiadendron giganteum
SEGI_37655 Sequoiadendron giganteum
Solyc10g079650.2 Solanum lycopersicum
Solyc10g079660.3 Solanum lycopersicum
Solyc10g079680.3 Solanum lycopersicum
Sopen10g030290 Solanum pennellii
Sopen10g030310 Solanum pennellii
Sp4g23560 Schrenkiella parvula
Sp5g05600 Schrenkiella parvula
Sp5g05610 Schrenkiella parvula
Sp6g38600 Schrenkiella parvula
TAR381G0331 Trochodendron aralioides
TAR623G0359 Trochodendron aralioides
THA.LOC104816108 Tarenaya hassleriana
THA.LOC104824402 Tarenaya hassleriana
Thecc.02G088000 Theobroma cacao
Thecc.05G136300 Theobroma cacao
Thecc.09G233200 Theobroma cacao
Thhalv10006189m.g Eutrema salsugineum
Thhalv10006191m.g Eutrema salsugineum
Thhalv10006491m.g Eutrema salsugineum
Thhalv10014371m.g Eutrema salsugineum
Thhalv10017167m.g Eutrema salsugineum
TPR.G19138 Trifolium pratense
TPR.G32716 Trifolium pratense
TWI53G2092 Tripterygium wilfordii
TWI74G0663 Tripterygium wilfordii
TWI77G0006 Tripterygium wilfordii
unitig_736.g22285 Utricularia gibba
vmacro09024 Vaccinium macrocarpon
VMungo1383G1215 Vigna mungo
Zm00001eb140680 Zea mays
Zm00001eb362800 Zea mays

User provided reference genes

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