Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p16860 Brassica napus
A05p09590 Brassica napus
A06p16290 Brassica napus
A06p19100 Brassica napus
A07p13970 Brassica napus
A07p37170 Brassica napus
A07p37180 Brassica napus
A09p11500 Brassica napus
A09p41590 Brassica napus
A09p68750 Brassica napus
A09p68770 Brassica napus
Aa31LG4G10220 Aethionema arabicum
Aa31LG7G7180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.252 Anthoceros agrestis
Actinidia17215 Actinidia chinensis
Ah.02g127830 Amaranthus hybridus
Ah.03g137340 Amaranthus hybridus
Ah.12g060110 Amaranthus hybridus
AL1G36840 Arabidopsis lyrata
AL2G10020 Arabidopsis lyrata
AL2G30210 Arabidopsis lyrata
AL358U10010 Arabidopsis lyrata
AL3G23430 Arabidopsis lyrata
AL3G39240 Arabidopsis lyrata
AL4G24460 Arabidopsis lyrata
AL4G36320 Arabidopsis lyrata
AL4G47590 Arabidopsis lyrata
AL5G10600 Arabidopsis lyrata
AL5G11480 Arabidopsis lyrata
AL5G13120 Arabidopsis lyrata
AL6G43120 Arabidopsis lyrata
AL8G20500 Arabidopsis lyrata
AL8G20510 Arabidopsis lyrata
AL8G20590 Arabidopsis lyrata
AL92U10020 Arabidopsis lyrata
Aqoxy3G00053 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6GC407 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJUW9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SEI9RH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XRPJ7L Arachis hypogaea
AT1G23170 Arabidopsis thaliana
AT1G70770 Arabidopsis thaliana
AT2G18070 Arabidopsis thaliana
AT3G11880 Arabidopsis thaliana
ATR0030G050 Amborella trichopoda
ATR0317G119 Amborella trichopoda
Atru.chr1.1897 Acer truncatum
Atru.chr11.655 Acer truncatum
AUR62014193 Chenopodium quinoa
AUR62039524 Chenopodium quinoa
BcaB01g02922 Brassica carinata
BcaB02g09367 Brassica carinata
BcaB02g09720 Brassica carinata
BcaB03g14163 Brassica carinata
BcaB03g14164 Brassica carinata
BcaB03g14927 Brassica carinata
BcaB03g14928 Brassica carinata
BcaB03g15557 Brassica carinata
BcaB03g16639 Brassica carinata
BcaB04g18189 Brassica carinata
BcaB04g18797 Brassica carinata
BcaB05g22201 Brassica carinata
BcaB05g23581 Brassica carinata
BcaB05g23680 Brassica carinata
BcaB05g23776 Brassica carinata
BcaB05g24611 Brassica carinata
BcaB06g26241 Brassica carinata
BcaB07g31320 Brassica carinata
BcaB07g31711 Brassica carinata
BcaB07g32184 Brassica carinata
BcaB07g32186 Brassica carinata
BcaC01g02598 Brassica carinata
BcaC01g04297 Brassica carinata
BcaC02g11735 Brassica carinata
BcaC03g15232 Brassica carinata
BcaC04g20348 Brassica carinata
BcaC04g22129 Brassica carinata
BcaC04g22952 Brassica carinata
BcaC05g26112 Brassica carinata
BcaC05g26224 Brassica carinata
BcaC07g39024 Brassica carinata
BcaC07g42244 Brassica carinata
BcaC07g42253 Brassica carinata
BcaC07g42254 Brassica carinata
BcaC07g42361 Brassica carinata
BcaC07g42364 Brassica carinata
BcaC07g42370 Brassica carinata
BcaC07g42388 Brassica carinata
BcaC08g46510 Brassica carinata
BcaC08g46512 Brassica carinata
BcaC08g46656 Brassica carinata
BcaC08g46657 Brassica carinata
BcaC08g46658 Brassica carinata
BolC2t08862H Brassica oleracea
BolC3t16581H Brassica oleracea
BolC3t18555H Brassica oleracea
BolC4t22835H Brassica oleracea
BolC4t25710H Brassica oleracea
BolC5t30788H Brassica oleracea
BolC5t30935H Brassica oleracea
BolC6t39543H Brassica oleracea
BolC6t39545H Brassica oleracea
BolC6t39669H Brassica oleracea
BolC6t39670H Brassica oleracea
BolC6t39671H Brassica oleracea
BolC6t39672H Brassica oleracea
BolC6t39674H Brassica oleracea
BolC8t49634H Brassica oleracea
BolC8t52847H Brassica oleracea
BolC8t52860H Brassica oleracea
BolC9t54243H Brassica oleracea
BolC9t57339H Brassica oleracea
BraA02t06740Z Brassica rapa
BraA03t10631Z Brassica rapa
BraA04t16207Z Brassica rapa
BraA05t19912Z Brassica rapa
BraA05t21404Z Brassica rapa
BraA06t24731Z Brassica rapa
BraA06t24993Z Brassica rapa
BraA07t29153Z Brassica rapa
BraA07t30731Z Brassica rapa
BraA07t31279Z Brassica rapa
BraA08t33057Z Brassica rapa
BraA09t36790Z Brassica rapa
BraA09t39650Z Brassica rapa
BraA09t42214Z Brassica rapa
C02p28180 Brassica napus
C02p29700 Brassica napus
C04p11860 Brassica napus
C04p11870 Brassica napus
C05p20900 Brassica napus
C05p20910 Brassica napus
C05p20920 Brassica napus
C05p22380 Brassica napus
C06p44840 Brassica napus
C06p44860 Brassica napus
C06p46150 Brassica napus
C06p46200 Brassica napus
C06p46240 Brassica napus
C06p46250 Brassica napus
C06p46270 Brassica napus
C06p46280 Brassica napus
C06p46290 Brassica napus
C08p11190 Brassica napus
C08p19980 Brassica napus
C08p52770 Brassica napus
C08p53320 Brassica napus
C09p13520 Brassica napus
C09p44620 Brassica napus
C09p67410 Brassica napus
CAN.G1027.1 Capsicum annuum
CAN.G222.9 Capsicum annuum
CANSAT01G0343 Cannabis sativa
CANSAT01G1495 Cannabis sativa
CARHR023630 Cardamine hirsuta
CARHR030430 Cardamine hirsuta
CARHR064030 Cardamine hirsuta
CARHR108790 Cardamine hirsuta
CARHR108800 Cardamine hirsuta
CARHR111720 Cardamine hirsuta
CARHR128760 Cardamine hirsuta
CARHR133670 Cardamine hirsuta
CARHR133680 Cardamine hirsuta
CARHR184760 Cardamine hirsuta
CARHR234650 Cardamine hirsuta
CARHR237900 Cardamine hirsuta
CARHR237910 Cardamine hirsuta
CARHR254720 Cardamine hirsuta
CARHR289260 Cardamine hirsuta
Carub.0001s2274 Capsella rubella
Carub.0002s1751 Capsella rubella
Carub.0004s1079 Capsella rubella
Carub.0004s1259 Capsella rubella
Carub.0005s0085 Capsella rubella
Carub.0007s3365 Capsella rubella
Carub.0007s3366 Capsella rubella
Carub.0007s3370 Capsella rubella
Carub.0007s3371 Capsella rubella
Ca_11593_v3 Cicer arietinum L.
CBR_g33920 Chara braunii
Cc06_g23100 Coffea canephora
Cc07_g13540 Coffea canephora
Cc11_g08280 Coffea canephora
CDE02G0948 Ceratophyllum demersum
CDE08G1097 Ceratophyllum demersum
Cfa007819 Carpinus fangiana
Cfa014978 Carpinus fangiana
Ciclev10011364m.g Citrus clementina
Ciclev10014686m.g Citrus clementina
CiPaw.03G071300 Carya illinoinensis
CiPaw.04G047100 Carya illinoinensis
CiPaw.05G193800 Carya illinoinensis
ClCG07G005980 Citrullus lanatus
COL.COLO4_09035 Corchorus olitorius
COL.COLO4_11968 Corchorus olitorius
COL.COLO4_13102 Corchorus olitorius
Cpa.g.sc1084.3 Carica papaya
Cpa.g.sc116.51 Carica papaya
CsaV3_5G014690 Cucumis sativus L.
CSS0014868 Camellia sinensis var. sinensis
DCAR_007312 Daucus carota
DCAR_030239 Daucus carota
Dinv14577 Davidia involucrata
Dinv18614 Davidia involucrata
Dinv19032 Davidia involucrata
Dinv26230 Davidia involucrata
Dinv28043 Davidia involucrata
Dinv28211 Davidia involucrata
Duzib133G1256 Durio zibethinus
Duzib211G0133 Durio zibethinus
Duzib251G0655 Durio zibethinus
Duzib268G1042 Durio zibethinus
ECA233G3051 Erigeron canadensis
EL10Ac6g14195 Beta vulgaris
Eucgr.F02850 Eucalyptus grandis
FAN12G0350 Fragaria x ananassa
FAN17G2556 Fragaria x ananassa
FAN19G2032 Fragaria x ananassa
FAN22G0549 Fragaria x ananassa
FAN23G2186 Fragaria x ananassa
FAN23G2595 Fragaria x ananassa
FAN26G1532 Fragaria x ananassa
FAN28G0984 Fragaria x ananassa
FAN28G2761 Fragaria x ananassa
FvH4_1g28730 Fragaria vesca
FvH4_4g34080 Fragaria vesca
Glyma.02G245500 Glycine max
Glyma.05G139900 Glycine max
Glyma.08G095200 Glycine max
Glyma.14G215700 Glycine max
Gohir.A01G150100 Gossypium hirsutum
Gohir.A04G141800 Gossypium hirsutum
Gohir.A07G078500 Gossypium hirsutum
Gohir.D01G143400 Gossypium hirsutum
Gohir.D04G187100 Gossypium hirsutum
Gohir.D07G083600 Gossypium hirsutum
Gorai.001G089200 Gossypium raimondii
Gorai.002G176900 Gossypium raimondii
Gorai.012G181300 Gossypium raimondii
GSVIVG01011708001 Vitis vinifera
GSVIVG01030770001 Vitis vinifera
HanXRQChr09g0258881 Helianthus annuus
HanXRQChr12g0363531 Helianthus annuus
HanXRQChr16g0529811 Helianthus annuus
HanXRQChr17g0566831 Helianthus annuus
Haze_10943 Corylus avellana
Haze_10944 Corylus avellana
Haze_14256 Corylus avellana
Hma1.2p1_0120F.1_g057100 Hydrangea macrophylla
Hma1.2p1_0330F.1_g127380 Hydrangea macrophylla
Hma1.2p1_0346F.1_g131550 Hydrangea macrophylla
Hma1.2p1_0524F.1_g172390 Hydrangea macrophylla
Hma1.2p1_1541F.1_g289690 Hydrangea macrophylla
HPP92_000178 Vanilla planifolia
HPP92_021860 Vanilla planifolia
Hund13110 Selenicereus undatus
Hund24965 Selenicereus undatus
Lalb_Chr00c06g0404611 Lupinus albus
Lalb_Chr00c06g0404621 Lupinus albus
Lalb_Chr00c06g0404631 Lupinus albus
Lalb_Chr07g0187721 Lupinus albus
Lalb_Chr10g0104401 Lupinus albus
Lalb_Chr12g0206771 Lupinus albus
Lalb_Chr13g0293721 Lupinus albus
Lj3A867T57 Lonicera japonica
Lj4A264T54 Lonicera japonica
Lj4g0004401 Lotus japonicus
Lj6A742T65 Lonicera japonica
LjContig00141g0001694 Lotus japonicus
Lsat_1_v5_gn_0_33361 Lactuca sativa
Lsat_1_v5_gn_0_36040 Lactuca sativa
Lsat_1_v5_gn_3_124180 Lactuca sativa
Lsat_1_v5_gn_3_128140 Lactuca sativa
Lsat_1_v5_gn_4_13621 Lactuca sativa
Lsat_1_v5_gn_5_34340 Lactuca sativa
Lsat_1_v5_gn_6_37120 Lactuca sativa
Lsat_1_v5_gn_7_69360 Lactuca sativa
Lsat_1_v5_gn_8_115241 Lactuca sativa
Lsat_1_v5_gn_8_14100 Lactuca sativa
Lsat_1_v5_gn_8_44220 Lactuca sativa
Manes.02G076500 Manihot esculenta
Manes.15G131000 Manihot esculenta
Manes.17G080400 Manihot esculenta
Mapoly0031s0122 Marchantia polymorpha
MD00G1185200 Malus domestica
MD09G1264000 Malus domestica
MD13G1022000 Malus domestica
MD16G1023000 Malus domestica
MELO3C026422.2 Cucumis melo
Migut.E00447 Erythranthe guttata
Migut.L00397 Erythranthe guttata
MSTRG.13605 Avicennia marina
MSTRG.2151 Avicennia marina
Nitab4.5_0000135g0070 Nicotiana tabacum
Nitab4.5_0000201g0300 Nicotiana tabacum
Nitab4.5_0003406g0020 Nicotiana tabacum
Nn1g04255 Nelumbo nucifera
Nn2g13629 Nelumbo nucifera
Nn2g13630 Nelumbo nucifera
Nn3g18292 Nelumbo nucifera
Nn4g24249 Nelumbo nucifera
Oeu014046.2 Olea europaea
Oeu032261.1 Olea europaea
Oeu059516.1 Olea europaea
Os01g0128400 Oryza sativa ssp. japonica
Peaxi162Scf00008g00213 Petunia axillaris
Peaxi162Scf00188g00047 Petunia axillaris
Peaxi162Scf00305g01116 Petunia axillaris
Peaxi162Scf00376g00120 Petunia axillaris
Peaxi162Scf00980g00013 Petunia axillaris
Peaxi162Scf00980g10015 Petunia axillaris
PGR004G1776 Punica granatum
PGR042G2918 Punica granatum
PGSC0003DMG400015690 Solanum tuberosum
PGSC0003DMG400015904 Solanum tuberosum
Phvul.002G183300 Phaseolus vulgaris
Phvul.008G235400 Phaseolus vulgaris
Potri.004G091100 Populus trichocarpa
Potri.008G131800 Populus trichocarpa
Potri.010G110500 Populus trichocarpa
Potri.017G124300 Populus trichocarpa
Pp3c11_18730 Physcomitrium patens
Pp3c7_7370 Physcomitrium patens
Prupe.1G329900 Prunus persica
Prupe.3G161600 Prunus persica
Psat7g082560 Pisum sativum
Psat7g104280 Pisum sativum
PSO017G3508 Papaver somniferum
PSO478G5318 Papaver somniferum
QL02p057972 Quercus lobata
QL03p031232 Quercus lobata
QL03p033886 Quercus lobata
QL93p0100_0380 Quercus lobata
RcHm_v2.0_Chr3g0493091 Rosa chinensis
RcHm_v2.0_Chr4g0443601 Rosa chinensis
RcHm_v2.0_Chr5g0017851 Rosa chinensis
Rhsim03G0110000 Rhododendron simsii
Rhsim03G0182700 Rhododendron simsii
Rhsim09G0094000 Rhododendron simsii
Rhsim10G0176900 Rhododendron simsii
Rhsim13G0132300 Rhododendron simsii
Sabra04G0061300 Salix brachista
Sabra08G0100600 Salix brachista
Sabra10G0080800 Salix brachista
Sabra17G0102300 Salix brachista
Sabra17G0102400 Salix brachista
Sabra17G0105000 Salix brachista
SalBow2G0126 Salvia bowleyana
SalBow2G2060 Salvia bowleyana
SalBow8G0986 Salvia bowleyana
Sc04g0005310 Simmondsia chinensis
Sed0001736 Sechium edule
Sed0027263 Sechium edule
SEGI_03798 Sequoiadendron giganteum
SEGI_04813 Sequoiadendron giganteum
SEGI_22109 Sequoiadendron giganteum
SEGI_33231 Sequoiadendron giganteum
SGA_v2.0_scaffold234G43657 Striga asiatica
SGA_v2.0_scaffold50G18475 Striga asiatica
SGA_v2.0_scaffold50G18479 Striga asiatica
SHI04565 Sapria himalayana
SHI46665 Sapria himalayana
SHI46666 Sapria himalayana
Solyc05g026540.3 Solanum lycopersicum
Solyc11g011220.2 Solanum lycopersicum
Sopen05g023000 Solanum pennellii
Sopen11g006000 Solanum pennellii
Sp1g20630 Schrenkiella parvula
Sp3g30860 Schrenkiella parvula
Sp3g31060 Schrenkiella parvula
Sp5g25950 Schrenkiella parvula
TAR371G0200 Trochodendron aralioides
TAR374G0312 Trochodendron aralioides
TAR622G0558 Trochodendron aralioides
THA.LOC104823001 Tarenaya hassleriana
Thecc.01G198700 Theobroma cacao
Thecc.02G287300 Theobroma cacao
Thecc.04G116400 Theobroma cacao
Thhalv10007115m.g Eutrema salsugineum
Thhalv10018292m.g Eutrema salsugineum
TPR.G17669 Trifolium pratense
TPR.G38617 Trifolium pratense
TPR.G38658 Trifolium pratense
TPR.G5140 Trifolium pratense
TWI53G0025 Tripterygium wilfordii
TWI53G1931 Tripterygium wilfordii
TWI74G1681 Tripterygium wilfordii
TWI77G0817 Tripterygium wilfordii
unitig_52.g17277 Utricularia gibba
unitig_62.g23738 Utricularia gibba
vmacro07690 Vaccinium macrocarpon
vmacro10661 Vaccinium macrocarpon
VMungo0251G1445 Vigna mungo
VMungo0647G0260 Vigna mungo
Zm00001eb125460 Zea mays
Zm00001eb335090 Zea mays

User provided reference genes

Program Settings