Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45560 Brassica napus
A03p61940 Brassica napus
A07p05100 Brassica napus
A09p20980 Brassica napus
Aa31LG5G3010 Aethionema arabicum
Aa31LG8G12870 Aethionema arabicum
Aa31LG8G13330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3664 Anthoceros agrestis
Actinidia17861 Actinidia chinensis
Actinidia22619 Actinidia chinensis
Actinidia23266 Actinidia chinensis
Actinidia23267 Actinidia chinensis
Ah.05g168810 Amaranthus hybridus
Ah.05g168820 Amaranthus hybridus
AL3G47470 Arabidopsis lyrata
AL7G18200 Arabidopsis lyrata
AL8G15770 Arabidopsis lyrata
Aqoxy5G01260 Aquilegia oxysepala
Aqoxy5G01262 Aquilegia oxysepala
Aqoxy5G01263 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7J23VE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BL68M3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GU4KEX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HA6K5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LIG7UX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRWV2F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SS1ETW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TA5R8Z Arachis hypogaea
AT2G15695 Arabidopsis thaliana
AT4G33360 Arabidopsis thaliana
AT5G44250 Arabidopsis thaliana
ATR0100G004 Amborella trichopoda
ATR0100G055 Amborella trichopoda
Atru.chr13.652 Acer truncatum
Atru.chr13.653 Acer truncatum
Atru.chr2.2703 Acer truncatum
Atru.chr4.2089 Acer truncatum
Atru.chr5.2741 Acer truncatum
Atru.chr5.2742 Acer truncatum
AUR62022424 Chenopodium quinoa
AUR62022425 Chenopodium quinoa
AUR62022426 Chenopodium quinoa
AUR62042179 Chenopodium quinoa
AUR62042181 Chenopodium quinoa
BcaB03g16312 Brassica carinata
BcaB05g21780 Brassica carinata
BcaB05g21781 Brassica carinata
BcaB05g23036 Brassica carinata
BcaB06g28435 Brassica carinata
BcaB07g30962 Brassica carinata
BcaB08g34608 Brassica carinata
BcaC01g03059 Brassica carinata
BcaC04g21851 Brassica carinata
BcaC06g36078 Brassica carinata
BcaNung02168 Brassica carinata
BolC3t17942H Brassica oleracea
BolC7t41228H Brassica oleracea
BolC7t46405H Brassica oleracea
BolC9t55560H Brassica oleracea
BraA03t13689Z Brassica rapa
BraA03t15233Z Brassica rapa
BraA07t28303Z Brassica rapa
BraA09t37697Z Brassica rapa
C02p44790 Brassica napus
C02p44820 Brassica napus
C03p56560 Brassica napus
C07p08100 Brassica napus
C07p59600 Brassica napus
C09p26650 Brassica napus
CAN.G1041.9 Capsicum annuum
CAN.G1422.8 Capsicum annuum
CAN.G290.1 Capsicum annuum
CAN.G371.33 Capsicum annuum
CANSAT11G0880 Cannabis sativa
CANSAT25G2617 Cannabis sativa
CANSAT25G3564 Cannabis sativa
CARHR106070 Cardamine hirsuta
CARHR160310 Cardamine hirsuta
CARHR178980 Cardamine hirsuta
CARHR241410 Cardamine hirsuta
Carub.0003s2956 Capsella rubella
Carub.0007s0712 Capsella rubella
Carub.0008s0427 Capsella rubella
Ca_15956_v3 Cicer arietinum L.
Ca_18674_v3 Cicer arietinum L.
Ca_18696_v3 Cicer arietinum L.
Ca_29063_v3 Cicer arietinum L.
CBR_g39560 Chara braunii
Cc02_g18660 Coffea canephora
Cc10_g04290 Coffea canephora
Cc10_g04300 Coffea canephora
CDE09G0883 Ceratophyllum demersum
CDE10G0224 Ceratophyllum demersum
Cfa005472 Carpinus fangiana
Cfa018529 Carpinus fangiana
Ciclev10028545m.g Citrus clementina
CiPaw.05G052200 Carya illinoinensis
CiPaw.06G143000 Carya illinoinensis
CiPaw.15G061300 Carya illinoinensis
CiPaw.15G061400 Carya illinoinensis
CiPaw.16G045700 Carya illinoinensis
ClCG05G009910 Citrullus lanatus
ClCG05G019760 Citrullus lanatus
COL.COLO4_26480 Corchorus olitorius
COL.COLO4_32672 Corchorus olitorius
Cpa.g.sc49.2 Carica papaya
Cpa.g.sc49.3 Carica papaya
Cpa.g.sc62.27 Carica papaya
Cre03.g150500 Chlamydomonas reinhardtii
CsaV3_3G018670 Cucumis sativus L.
CsaV3_4G034200 Cucumis sativus L.
CsaV3_4G034210 Cucumis sativus L.
CSS0000353 Camellia sinensis var. sinensis
CSS0022663 Camellia sinensis var. sinensis
CSS0036124 Camellia sinensis var. sinensis
CSS0040487 Camellia sinensis var. sinensis
CSS0045021 Camellia sinensis var. sinensis
DCAR_011570 Daucus carota
DCAR_012767 Daucus carota
DCAR_019460 Daucus carota
DCAR_029028 Daucus carota
Dinv23610 Davidia involucrata
Dinv23611 Davidia involucrata
Dinv35971 Davidia involucrata
Dinv35972 Davidia involucrata
Dinv39326 Davidia involucrata
Dinv42143 Davidia involucrata
Duzib052G1188 Durio zibethinus
Duzib093G1754 Durio zibethinus
Duzib116G0539 Durio zibethinus
Duzib116G0543 Durio zibethinus
Duzib248G0518 Durio zibethinus
ECA236G2769 Erigeron canadensis
ECA246G2958 Erigeron canadensis
ECA247G1214 Erigeron canadensis
ECA247G1238 Erigeron canadensis
EL10Ac1g01745 Beta vulgaris
EL10Ac1g01788 Beta vulgaris
Eucgr.F00238 Eucalyptus grandis
Eucgr.F02362 Eucalyptus grandis
Eucgr.G01459 Eucalyptus grandis
Eucgr.L02396 Eucalyptus grandis
FAN15G0193 Fragaria x ananassa
FAN15G0663 Fragaria x ananassa
FAN15G2861 Fragaria x ananassa
FAN20G1968 Fragaria x ananassa
FAN20G1997 Fragaria x ananassa
FAN24G1240 Fragaria x ananassa
FAN27G1544 Fragaria x ananassa
FvH4_2g06340 Fragaria vesca
FvH4_2g34590 Fragaria vesca
FvH4_2g34600 Fragaria vesca
Glyma.02G133600 Glycine max
Glyma.04G037700 Glycine max
Glyma.06G038600 Glycine max
Glyma.06G038700 Glycine max
Glyma.07G211400 Glycine max
Gohir.A01G006400 Gossypium hirsutum
Gohir.A01G118900 Gossypium hirsutum
Gohir.A03G190100 Gossypium hirsutum
Gohir.A05G201500 Gossypium hirsutum
Gohir.A05G201600 Gossypium hirsutum
Gohir.A13G057200 Gossypium hirsutum
Gohir.A13G104901 Gossypium hirsutum
Gohir.D01G006500 Gossypium hirsutum
Gohir.D01G107100 Gossypium hirsutum
Gohir.D02G210800 Gossypium hirsutum
Gohir.D05G204600 Gossypium hirsutum
Gohir.D05G204700 Gossypium hirsutum
Gorai.002G007500 Gossypium raimondii
Gorai.002G131500 Gossypium raimondii
Gorai.005G238800 Gossypium raimondii
Gorai.009G210900 Gossypium raimondii
Gorai.009G211000 Gossypium raimondii
GSVIVG01009520001 Vitis vinifera
GSVIVG01009521001 Vitis vinifera
GSVIVG01031764001 Vitis vinifera
HanXRQChr02g0037651 Helianthus annuus
HanXRQChr02g0037721 Helianthus annuus
HanXRQChr04g0128261 Helianthus annuus
HanXRQChr16g0508481 Helianthus annuus
Haze_01840 Corylus avellana
Haze_01845 Corylus avellana
Haze_17539 Corylus avellana
Haze_17540 Corylus avellana
Haze_17542 Corylus avellana
Haze_17548 Corylus avellana
Haze_17549 Corylus avellana
Haze_17551 Corylus avellana
Hma1.2p1_0718F.1_g208400 Hydrangea macrophylla
Hma1.2p1_0982F.1_g243910 Hydrangea macrophylla
HPP92_005781 Vanilla planifolia
HPP92_005809 Vanilla planifolia
HPP92_010955 Vanilla planifolia
HPP92_010956 Vanilla planifolia
HPP92_010959 Vanilla planifolia
HPP92_010960 Vanilla planifolia
HPP92_016380 Vanilla planifolia
Hund00329 Selenicereus undatus
Hund17582 Selenicereus undatus
Hund17585 Selenicereus undatus
Lalb_Chr08g0245611 Lupinus albus
Lalb_Chr16g0384641 Lupinus albus
Lalb_Chr23g0267001 Lupinus albus
Lj1g0004345 Lotus japonicus
Lj1g0008117 Lotus japonicus
Lj1g0010547 Lotus japonicus
Lj3A736T20 Lonicera japonica
Lj4A54T41 Lonicera japonica
Lj4A775T67 Lonicera japonica
Lj4C775G11 Lonicera japonica
Lj4g0016453 Lotus japonicus
Lj5A208G41 Lonicera japonica
Lsat_1_v5_gn_1_20300 Lactuca sativa
Lsat_1_v5_gn_1_20380 Lactuca sativa
Lsat_1_v5_gn_1_20400 Lactuca sativa
Lsat_1_v5_gn_1_20920 Lactuca sativa
Lsat_1_v5_gn_7_87121 Lactuca sativa
Lsat_1_v5_gn_8_2421 Lactuca sativa
Manes.05G172100 Manihot esculenta
Manes.10G066100 Manihot esculenta
Manes.18G032300 Manihot esculenta
Manes.18G032400 Manihot esculenta
Mapoly0011s0141 Marchantia polymorpha
Mapoly0015s0028 Marchantia polymorpha
Mapoly0062s0027 Marchantia polymorpha
MBI01_g08273_MAGBIO Magnolia biondii
MBI01_g47836_MAGBIO Magnolia biondii
MBI02_g17332_MAGBIO Magnolia biondii
MBI02_g17333_MAGBIO Magnolia biondii
MBI06_g24645_MAGBIO Magnolia biondii
MBI09_g19220_MAGBIO Magnolia biondii
MBI12_g42659_MAGBIO Magnolia biondii
MBI15_g15926_MAGBIO Magnolia biondii
MBI15_g38240_MAGBIO Magnolia biondii
MD05G1077400 Malus domestica
MD08G1103100 Malus domestica
MD08G1103200 Malus domestica
MD10G1092600 Malus domestica
MD15G1084500 Malus domestica
Medtr3g101490 Medicago truncatula
Medtr3g101500 Medicago truncatula
Medtr4g086420 Medicago truncatula
MELO3C016741.2 Cucumis melo
MELO3C016742.2 Cucumis melo
MELO3C019501.2 Cucumis melo
Migut.B00328 Erythranthe guttata
Migut.C00593 Erythranthe guttata
Migut.N01195 Erythranthe guttata
Migut.N02704 Erythranthe guttata
MSTRG.1336 Avicennia marina
MSTRG.1337 Avicennia marina
MSTRG.20147 Avicennia marina
MSTRG.23410 Avicennia marina
Nitab4.5_0000453g0190 Nicotiana tabacum
Nitab4.5_0000686g0030 Nicotiana tabacum
Nitab4.5_0001101g0100 Nicotiana tabacum
Nitab4.5_0001845g0020 Nicotiana tabacum
Nitab4.5_0002097g0090 Nicotiana tabacum
Nitab4.5_0004184g0040 Nicotiana tabacum
Nitab4.5_0005249g0020 Nicotiana tabacum
Nn1g00509 Nelumbo nucifera
Nn1g05825 Nelumbo nucifera
Nn1g05828 Nelumbo nucifera
Nn5g30234 Nelumbo nucifera
Oeu003702.2 Olea europaea
Oeu006151.1 Olea europaea
Oeu010574.1 Olea europaea
Oeu010770.1 Olea europaea
Oeu017165.1 Olea europaea
Oeu043551.1 Olea europaea
Oeu043552.1 Olea europaea
Oeu049971.1 Olea europaea
Os03g0184550 Oryza sativa ssp. japonica
Os03g0184600 Oryza sativa ssp. japonica
Os06g0213400 Oryza sativa ssp. japonica
Os11g0614900 Oryza sativa ssp. japonica
Peaxi162Scf00016g01742 Petunia axillaris
Peaxi162Scf00064g00122 Petunia axillaris
Peaxi162Scf00252g01216 Petunia axillaris
PGR031G0488 Punica granatum
PGR031G1346 Punica granatum
PGR042G3680 Punica granatum
PGSC0003DMG400008023 Solanum tuberosum
PGSC0003DMG400015444 Solanum tuberosum
PGSC0003DMG400025822 Solanum tuberosum
Phvul.003G295500 Phaseolus vulgaris
Phvul.009G063900 Phaseolus vulgaris
Phvul.009G064000 Phaseolus vulgaris
Potri.002G127400 Populus trichocarpa
Potri.002G127500 Populus trichocarpa
Potri.002G127600 Populus trichocarpa
Potri.004G142000 Populus trichocarpa
Potri.009G103500 Populus trichocarpa
Potri.014G031800 Populus trichocarpa
Pp3c16_12640 Physcomitrium patens
Pp3c17_9770 Physcomitrium patens
PRCOL_00002485 Prasinoderma coloniale
Prupe.1G438100 Prunus persica
Prupe.1G438200 Prunus persica
Prupe.8G122400 Prunus persica
Psat0s1580g0040 Pisum sativum
Psat0s3123g0120 Pisum sativum
Psat0s3123g0160 Pisum sativum
Psat5g077160 Pisum sativum
Psat7g123160 Pisum sativum
PSO170G1058 Papaver somniferum
PSO170G3705 Papaver somniferum
PSO210G1621 Papaver somniferum
PSO210G4359 Papaver somniferum
PSO782G0313 Papaver somniferum
QL02p005341 Quercus lobata
QL02p005347 Quercus lobata
QL02p005353 Quercus lobata
QL11p036180 Quercus lobata
RcHm_v2.0_Chr2g0160941 Rosa chinensis
RcHm_v2.0_Chr4g0409851 Rosa chinensis
RcHm_v2.0_Chr5g0013111 Rosa chinensis
RcHm_v2.0_Chr6g0258221 Rosa chinensis
RcHm_v2.0_Chr6g0307541 Rosa chinensis
RcHm_v2.0_Chr6g0307551 Rosa chinensis
RcHm_v2.0_Chr6g0307561 Rosa chinensis
RcHm_v2.0_Chr6g0307701 Rosa chinensis
RcHm_v2.0_Chr6g0307711 Rosa chinensis
Rhsim05G0082900 Rhododendron simsii
Rhsim06G0048400 Rhododendron simsii
Sabra02G0099800 Salix brachista
Sabra02G0099900 Salix brachista
Sabra04G0093800 Salix brachista
Sabra04G0093900 Salix brachista
Sabra09G0079200 Salix brachista
Sabra14G0022300 Salix brachista
SalBow3G2304 Salvia bowleyana
SalBow6G3773 Salvia bowleyana
SalBow7G0843 Salvia bowleyana
SalBow7G2586 Salvia bowleyana
SalBow8G5412 Salvia bowleyana
Sc02g0007050 Simmondsia chinensis
Sc26g0003990 Simmondsia chinensis
Sed0008971 Sechium edule
Sed0011177 Sechium edule
Sed0019855 Sechium edule
Sed0021887 Sechium edule
Sed0026214 Sechium edule
SEGI_01458 Sequoiadendron giganteum
SEGI_26518 Sequoiadendron giganteum
SGA_v2.0_scaffold208G41993 Striga asiatica
SGA_v2.0_scaffold226G43131 Striga asiatica
SGA_v2.0_scaffold32G13074 Striga asiatica
SGA_v2.0_scaffold90G27675 Striga asiatica
SMO201G0007 Selaginella moellendorffii
SMO347G0365 Selaginella moellendorffii
Solyc01g108620.3 Solanum lycopersicum
Solyc04g079140.3 Solanum lycopersicum
Solyc12g088880.2 Solanum lycopersicum
Sopen01g050840 Solanum pennellii
Sopen04g032750 Solanum pennellii
Sopen12g030770 Solanum pennellii
Sp2g09060 Schrenkiella parvula
Sp3g28970 Schrenkiella parvula
Sp7g31070 Schrenkiella parvula
TAR381G0900 Trochodendron aralioides
TAR381G1668 Trochodendron aralioides
TAR625G0983 Trochodendron aralioides
TAR625G1488 Trochodendron aralioides
THA.LOC104803683 Tarenaya hassleriana
THA.LOC104804372 Tarenaya hassleriana
THA.LOC104819463 Tarenaya hassleriana
THA.LOC104819585 Tarenaya hassleriana
Thecc.02G098800 Theobroma cacao
Thecc.08G010700 Theobroma cacao
Thecc.08G010800 Theobroma cacao
Thhalv10003219m.g Eutrema salsugineum
Thhalv10022704m.g Eutrema salsugineum
Thhalv10025657m.g Eutrema salsugineum
TPR.G30830 Trifolium pratense
TPR.G35860 Trifolium pratense
TPR.G35866 Trifolium pratense
TPR.G40247 Trifolium pratense
TWI36G0499 Tripterygium wilfordii
TWI56G0317 Tripterygium wilfordii
TWI56G0954 Tripterygium wilfordii
TWI79G0065 Tripterygium wilfordii
unitig_0.g856 Utricularia gibba
unitig_744.g24595 Utricularia gibba
unitig_90.g27525 Utricularia gibba
unitig_90.g27526 Utricularia gibba
vmacro19494 Vaccinium macrocarpon
vmacro21534 Vaccinium macrocarpon
vmacro21535 Vaccinium macrocarpon
vmacro21536 Vaccinium macrocarpon
VMungo0251G2817 Vigna mungo
VMungo1309G1770 Vigna mungo
Zm00001eb006380 Zea mays
Zm00001eb166820 Zea mays
Zm00001eb279160 Zea mays
Zm00001eb373180 Zea mays

User provided reference genes

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