Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38410 Brassica napus
A02p39710 Brassica napus
A03p39440 Brassica napus
A06p36200 Brassica napus
A07p17810 Brassica napus
Aa31LG11G4840 Aethionema arabicum
Aa31LG5G9070 Aethionema arabicum
Aa31LG8G2880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.205 Anthoceros agrestis
Actinidia07435 Actinidia chinensis
Actinidia22005 Actinidia chinensis
Actinidia26404 Actinidia chinensis
Actinidia40452 Actinidia chinensis
Ah.09g225790 Amaranthus hybridus
Ah.09g225800 Amaranthus hybridus
Ah.10g026320 Amaranthus hybridus
Ah.12g064030 Amaranthus hybridus
Ah.14g080630 Amaranthus hybridus
AL3G28340 Arabidopsis lyrata
AL4G19730 Arabidopsis lyrata
AL6G37290 Arabidopsis lyrata
Aqoxy7G02086 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YFD5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81V95F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CN67L5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z2CVAQ Arachis hypogaea
AT2G26695 Arabidopsis thaliana
AT3G15680 Arabidopsis thaliana
AT5G25490 Arabidopsis thaliana
Atru.chr1.3091 Acer truncatum
Atru.chr7.1191 Acer truncatum
Atru.chr7.1193 Acer truncatum
Atru.chr7.2384 Acer truncatum
AUR62011084 Chenopodium quinoa
AUR62011085 Chenopodium quinoa
AUR62024886 Chenopodium quinoa
AUR62030661 Chenopodium quinoa
AUR62033466 Chenopodium quinoa
AUR62033467 Chenopodium quinoa
BcaB04g20907 Brassica carinata
BcaB07g29995 Brassica carinata
BcaC01g03860 Brassica carinata
BcaC01g03861 Brassica carinata
BcaC01g03862 Brassica carinata
BcaC02g10834 Brassica carinata
BcaC09g48549 Brassica carinata
BcaNung07111 Brassica carinata
BolC1t04827H Brassica oleracea
BolC2t12012H Brassica oleracea
BolC3t17061H Brassica oleracea
BolC4t23970H Brassica oleracea
BolC7t44762H Brassica oleracea
BraA01t03891Z Brassica rapa
BraA02t08936Z Brassica rapa
BraA03t13094Z Brassica rapa
BraA06t26541Z Brassica rapa
BraA07t29501Z Brassica rapa
C01p48720 Brassica napus
C02p59490 Brassica napus
C03p47830 Brassica napus
C04p24640 Brassica napus
C07p42330 Brassica napus
CAN.G348.2 Capsicum annuum
CAN.G377.4 Capsicum annuum
CAN.G377.5 Capsicum annuum
CANSAT11G0701 Cannabis sativa
CANSAT56G0615 Cannabis sativa
CARHR090770 Cardamine hirsuta
CARHR118750 Cardamine hirsuta
CARHR187900 Cardamine hirsuta
Carub.0003s1543 Capsella rubella
Carub.0004s0700 Capsella rubella
Carub.0006s2335 Capsella rubella
Ca_02445_v3 Cicer arietinum L.
Ca_15722_v3 Cicer arietinum L.
Ca_20426_v3 Cicer arietinum L.
Ca_21698_v3 Cicer arietinum L.
CBR_g38837 Chara braunii
Cc06_g08810 Coffea canephora
Cc11_g01930 Coffea canephora
CDE04G2147 Ceratophyllum demersum
Cfa002010 Carpinus fangiana
Cfa003344 Carpinus fangiana
Cfa023651 Carpinus fangiana
Ciclev10009760m.g Citrus clementina
Ciclev10009893m.g Citrus clementina
Ciclev10026703m.g Citrus clementina
CiPaw.01G244500 Carya illinoinensis
CiPaw.02G154900 Carya illinoinensis
CiPaw.03G241500 Carya illinoinensis
CiPaw.04G170100 Carya illinoinensis
CiPaw.07G221200 Carya illinoinensis
CiPaw.08G012900 Carya illinoinensis
ClCG06G010900 Citrullus lanatus
ClCG07G012800 Citrullus lanatus
ClCG08G013170 Citrullus lanatus
ClCG11G002870 Citrullus lanatus
COL.COLO4_05759 Corchorus olitorius
COL.COLO4_12897 Corchorus olitorius
COL.COLO4_23975 Corchorus olitorius
COL.COLO4_25495 Corchorus olitorius
Cpa.g.sc115.12 Carica papaya
Cpa.g.sc336.9 Carica papaya
Cpa.g.sc75.58 Carica papaya
CsaV3_1G029820 Cucumis sativus L.
CsaV3_2G002710 Cucumis sativus L.
CsaV3_2G031890 Cucumis sativus L.
CsaV3_4G001400 Cucumis sativus L.
CSS0003314 Camellia sinensis var. sinensis
CSS0017404 Camellia sinensis var. sinensis
CSS0026256 Camellia sinensis var. sinensis
CSS0030088 Camellia sinensis var. sinensis
CSS0030555 Camellia sinensis var. sinensis
CSS0036181 Camellia sinensis var. sinensis
CSS0037183 Camellia sinensis var. sinensis
CSS0039712 Camellia sinensis var. sinensis
CSS0040547 Camellia sinensis var. sinensis
CSS0040777 Camellia sinensis var. sinensis
CSS0049275 Camellia sinensis var. sinensis
DCAR_003041 Daucus carota
DCAR_009202 Daucus carota
DCAR_009203 Daucus carota
DCAR_014864 Daucus carota
DCAR_017833 Daucus carota
Dinv11624 Davidia involucrata
Dinv36550 Davidia involucrata
Dinv36551 Davidia involucrata
Dinv41533 Davidia involucrata
Duzib150G1447 Durio zibethinus
Duzib160G0303 Durio zibethinus
Duzib168G1240 Durio zibethinus
Duzib168G1983 Durio zibethinus
Duzib187G0397 Durio zibethinus
Duzib187G0642 Durio zibethinus
Duzib192G0024 Durio zibethinus
Duzib192G0968 Durio zibethinus
Duzib235G0157 Durio zibethinus
ECA233G4471 Erigeron canadensis
ECA234G0565 Erigeron canadensis
ECA234G0849 Erigeron canadensis
EL10Ac2g02598 Beta vulgaris
EL10Ac8g18609 Beta vulgaris
EL10Ac8g18610 Beta vulgaris
Eucgr.C01126 Eucalyptus grandis
Eucgr.C01132 Eucalyptus grandis
Eucgr.C01779 Eucalyptus grandis
Eucgr.C02807 Eucalyptus grandis
Eucgr.F02548 Eucalyptus grandis
Eucgr.L00288 Eucalyptus grandis
Eucgr.L00295 Eucalyptus grandis
FAN02G4335 Fragaria x ananassa
FAN05G3054 Fragaria x ananassa
FAN09G2896 Fragaria x ananassa
FAN14G1205 Fragaria x ananassa
FAN15G3262 Fragaria x ananassa
FAN19G1352 Fragaria x ananassa
FAN20G2165 Fragaria x ananassa
FAN23G1583 Fragaria x ananassa
FAN24G1530 Fragaria x ananassa
FAN26G3103 Fragaria x ananassa
FAN27G2421 Fragaria x ananassa
FAN28G0859 Fragaria x ananassa
FvH4_1g03630 Fragaria vesca
FvH4_2g29540 Fragaria vesca
FvH4_6g30320 Fragaria vesca
Glyma.02G196600 Glycine max
Glyma.04G068400 Glycine max
Glyma.05G008600 Glycine max
Glyma.05G008700 Glycine max
Glyma.06G069900 Glycine max
Glyma.06G216600 Glycine max
Glyma.07G032300 Glycine max
Glyma.08G210200 Glycine max
Glyma.17G116800 Glycine max
Glyma.17G116900 Glycine max
Gohir.A05G009300 Gossypium hirsutum
Gohir.A05G018000 Gossypium hirsutum
Gohir.A05G125100 Gossypium hirsutum
Gohir.A06G057400 Gossypium hirsutum
Gohir.A06G186900 Gossypium hirsutum
Gohir.A13G199000 Gossypium hirsutum
Gohir.D05G010000 Gossypium hirsutum
Gohir.D05G018900 Gossypium hirsutum
Gohir.D05G126100 Gossypium hirsutum
Gohir.D06G055700 Gossypium hirsutum
Gohir.D06G193100 Gossypium hirsutum
Gohir.D13G204400 Gossypium hirsutum
Gorai.009G010300 Gossypium raimondii
Gorai.009G019300 Gossypium raimondii
Gorai.009G130100 Gossypium raimondii
Gorai.010G065000 Gossypium raimondii
Gorai.010G227000 Gossypium raimondii
Gorai.013G233200 Gossypium raimondii
GSVIVG01015499001 Vitis vinifera
GSVIVG01017252001 Vitis vinifera
GSVIVG01035819001 Vitis vinifera
HanXRQChr01g0031111 Helianthus annuus
HanXRQChr02g0050811 Helianthus annuus
HanXRQChr10g0316651 Helianthus annuus
HanXRQChr10g0316661 Helianthus annuus
HanXRQChr12g0356401 Helianthus annuus
HanXRQChr12g0356421 Helianthus annuus
HanXRQChr12g0356431 Helianthus annuus
HanXRQChr13g0402691 Helianthus annuus
Haze_16514 Corylus avellana
Haze_21557 Corylus avellana
Hma1.2p1_0665F.1_g199180 Hydrangea macrophylla
HPP92_008654 Vanilla planifolia
HPP92_023168 Vanilla planifolia
HPP92_024604 Vanilla planifolia
Hund03022 Selenicereus undatus
Hund09145 Selenicereus undatus
Hund09146 Selenicereus undatus
Hund26485 Selenicereus undatus
Hund26490 Selenicereus undatus
Lalb_Chr04g0262471 Lupinus albus
Lalb_Chr07g0178781 Lupinus albus
Lalb_Chr08g0243981 Lupinus albus
Lalb_Chr11g0063821 Lupinus albus
Lalb_Chr13g0301981 Lupinus albus
Lalb_Chr14g0373691 Lupinus albus
Lalb_Chr19g0135021 Lupinus albus
Lj1g0016866 Lotus japonicus
Lj3g0007786 Lotus japonicus
Lj4C463T2 Lonicera japonica
Lj4g0004155 Lotus japonicus
Lj6g0008040 Lotus japonicus
Lj7A719T41 Lonicera japonica
Lj8C624T10 Lonicera japonica
Lsat_1_v5_gn_5_31741 Lactuca sativa
Lsat_1_v5_gn_5_98101 Lactuca sativa
Lsat_1_v5_gn_5_98121 Lactuca sativa
Lsat_1_v5_gn_6_22340 Lactuca sativa
Lsat_1_v5_gn_8_57381 Lactuca sativa
Manes.03G017100 Manihot esculenta
Manes.04G116400 Manihot esculenta
Manes.06G050100 Manihot esculenta
Manes.11G052700 Manihot esculenta
Manes.14G130000 Manihot esculenta
Manes.14G130300 Manihot esculenta
Manes.16G120000 Manihot esculenta
Mapoly0019s0131 Marchantia polymorpha
MBI04_g19548_MAGBIO Magnolia biondii
MBI04_g30115_MAGBIO Magnolia biondii
MCO05G332 Micromonas commoda
MCO13G454 Micromonas commoda
MCO14G117 Micromonas commoda
MCO15G280 Micromonas commoda
MCO16G458 Micromonas commoda
MD02G1035800 Malus domestica
MD08G1146100 Malus domestica
MD09G1220800 Malus domestica
MD15G1121500 Malus domestica
MD15G1176000 Malus domestica
MD17G1204500 Malus domestica
Medtr2g054750 Medicago truncatula
Medtr3g107610 Medicago truncatula
Medtr4g011190 Medicago truncatula
Medtr4g113840 Medicago truncatula
MELO3C004523.2 Cucumis melo
MELO3C011238.2 Cucumis melo
MELO3C017900.2 Cucumis melo
MELO3C023401.2 Cucumis melo
MELO3C026642.2 Cucumis melo
Migut.J01181 Erythranthe guttata
Migut.K00463 Erythranthe guttata
Migut.K00472 Erythranthe guttata
MSTRG.11772 Avicennia marina
MSTRG.19608 Avicennia marina
MSTRG.25849 Avicennia marina
MSTRG.6066 Avicennia marina
Nitab4.5_0000151g0010 Nicotiana tabacum
Nitab4.5_0003558g0030 Nicotiana tabacum
Nitab4.5_0003558g0070 Nicotiana tabacum
Nitab4.5_0003558g0080 Nicotiana tabacum
Nitab4.5_0003558g0090 Nicotiana tabacum
Nitab4.5_0004501g0010 Nicotiana tabacum
Nitab4.5_0005563g0020 Nicotiana tabacum
Nitab4.5_0005563g0030 Nicotiana tabacum
Nitab4.5_0005563g0040 Nicotiana tabacum
Nn8g39385 Nelumbo nucifera
Oeu020100.1 Olea europaea
Oeu022127.1 Olea europaea
Oeu030208.1 Olea europaea
Oeu034107.1 Olea europaea
Oeu045333.1 Olea europaea
Oeu058055.1 Olea europaea
Os01g0555100 Oryza sativa ssp. japonica
Os02g0203700 Oryza sativa ssp. japonica
Os06g0141200 Oryza sativa ssp. japonica
Peaxi162Scf00341g00012 Petunia axillaris
Peaxi162Scf00641g00018 Petunia axillaris
Peaxi162Scf00984g00119 Petunia axillaris
Peaxi162Scf00984g10021 Petunia axillaris
PGR031G0194 Punica granatum
PGR031G3637 Punica granatum
PGR142G1478 Punica granatum
PGSC0003DMG400007381 Solanum tuberosum
PGSC0003DMG400007852 Solanum tuberosum
PGSC0003DMG401020664 Solanum tuberosum
PGSC0003DMG402020664 Solanum tuberosum
Phvul.003G162400 Phaseolus vulgaris
Phvul.003G162500 Phaseolus vulgaris
Phvul.005G175000 Phaseolus vulgaris
Phvul.009G094900 Phaseolus vulgaris
Phvul.009G198300 Phaseolus vulgaris
Phvul.010G153700 Phaseolus vulgaris
Potri.001G172700 Populus trichocarpa
Potri.003G061300 Populus trichocarpa
Potri.006G149900 Populus trichocarpa
Potri.006G251300 Populus trichocarpa
Potri.018G029900 Populus trichocarpa
Potri.018G066900 Populus trichocarpa
PRCOL_00004617 Prasinoderma coloniale
Prupe.1G474600 Prunus persica
Prupe.3G080000 Prunus persica
Prupe.7G239400 Prunus persica
Psat0s3001g0040 Pisum sativum
Psat1g026920 Pisum sativum
Psat4g041680 Pisum sativum
Psat7g255600 Pisum sativum
PSO170G3356 Papaver somniferum
PSO210G2060 Papaver somniferum
PSO210G5966 Papaver somniferum
PSO455G0132 Papaver somniferum
QL02p022388 Quercus lobata
QL02p087744 Quercus lobata
QL05p027843 Quercus lobata
RcHm_v2.0_Chr2g0136561 Rosa chinensis
RcHm_v2.0_Chr6g0298401 Rosa chinensis
Rhsim01G0007400 Rhododendron simsii
Rhsim01G0007600 Rhododendron simsii
Rhsim01G0076900 Rhododendron simsii
Rhsim02G0195300 Rhododendron simsii
Rhsim02G0196500 Rhododendron simsii
Rhsim11G0119300 Rhododendron simsii
Sabra03G0035600 Salix brachista
Sabra06G0118600 Salix brachista
Sabra06G0196400 Salix brachista
Sabra18G0031700 Salix brachista
Sabra18G0060000 Salix brachista
Sc18g0000730 Simmondsia chinensis
Sed0001195 Sechium edule
Sed0001713 Sechium edule
Sed0004083 Sechium edule
Sed0010705 Sechium edule
Sed0021606 Sechium edule
Sed0024738 Sechium edule
Sed0025918 Sechium edule
SGA_v2.0_scaffold1093G53838 Striga asiatica
SGA_v2.0_scaffold45G17067 Striga asiatica
SHI18574 Sapria himalayana
SMO164G0137 Selaginella moellendorffii
SMO329G0042 Selaginella moellendorffii
Solyc08g067180.4 Solanum lycopersicum
Solyc12g006590.3 Solanum lycopersicum
Solyc12g006600.3 Solanum lycopersicum
Solyc12g011060.3 Solanum lycopersicum
Sopen08g021120 Solanum pennellii
Sopen12g002540 Solanum pennellii
Sopen12g002550 Solanum pennellii
Sopen12g006430 Solanum pennellii
Sp2g22040 Schrenkiella parvula
Sp3g13980 Schrenkiella parvula
Sp4g08900 Schrenkiella parvula
TAR383G0790 Trochodendron aralioides
TAR625G0543 Trochodendron aralioides
TAR636G1357 Trochodendron aralioides
TAR636G1593 Trochodendron aralioides
TAR636G2046 Trochodendron aralioides
THA.LOC104799705 Tarenaya hassleriana
THA.LOC104809001 Tarenaya hassleriana
THA.LOC104810500 Tarenaya hassleriana
THA.LOC104818036 Tarenaya hassleriana
THA.LOC104826539 Tarenaya hassleriana
Thecc.06G072500 Theobroma cacao
Thecc.09G122800 Theobroma cacao
Thecc.09G149700 Theobroma cacao
Thhalv10005026m.g Eutrema salsugineum
Thhalv10017402m.g Eutrema salsugineum
Thhalv10021670m.g Eutrema salsugineum
TPR.G10349 Trifolium pratense
TPR.G10709 Trifolium pratense
TPR.G31764 Trifolium pratense
TPR.G38630 Trifolium pratense
TWI12G0810 Tripterygium wilfordii
TWI34G0224 Tripterygium wilfordii
TWI34G1607 Tripterygium wilfordii
TWI63G0584 Tripterygium wilfordii
TWI63G1484 Tripterygium wilfordii
TWI75G1763 Tripterygium wilfordii
unitig_32.g11666 Utricularia gibba
unitig_748.g7149 Utricularia gibba
unitig_748.g7371 Utricularia gibba
vmacro05191 Vaccinium macrocarpon
vmacro06176 Vaccinium macrocarpon
vmacro11151 Vaccinium macrocarpon
vmacro13104 Vaccinium macrocarpon
vmacro23135 Vaccinium macrocarpon
VMungo0331G1537 Vigna mungo
VMungo1215G0495 Vigna mungo
VMungo1215G2977 Vigna mungo
VMungo1309G0321 Vigna mungo
VMungo1309G1359 Vigna mungo
Zm00001eb205550 Zea mays
Zm00001eb235450 Zea mays
Zm00001eb356350 Zea mays
Zm00001eb377420 Zea mays

User provided reference genes

Program Settings