Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00020 Brassica napus
A03p04170 Brassica napus
A04p01990 Brassica napus
A05p04220 Brassica napus
A07p24900 Brassica napus
A09p52230 Brassica napus
A09p52270 Brassica napus
A10p27770 Brassica napus
Aa31LG10G14170 Aethionema arabicum
Aa31LG1G25760 Aethionema arabicum
Aa31LG3G17480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.719 Anthoceros agrestis
Actinidia06517 Actinidia chinensis
Actinidia11424 Actinidia chinensis
Actinidia25311 Actinidia chinensis
Actinidia39244 Actinidia chinensis
Ah.01g007420 Amaranthus hybridus
Ah.01g007430 Amaranthus hybridus
Ah.07g203350 Amaranthus hybridus
Ah.13g073120 Amaranthus hybridus
AL1G66320 Arabidopsis lyrata
AL4G42980 Arabidopsis lyrata
AL5G42080 Arabidopsis lyrata
AL6G19950 Arabidopsis lyrata
Aqoxy4G01279 Aquilegia oxysepala
Aqoxy5G00003 Aquilegia oxysepala
Aqoxy5G01392 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C3G91V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P33QQK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QKR4AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TSPL2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XE4EDZ Arachis hypogaea
AT2G44100 Arabidopsis thaliana
AT3G59920 Arabidopsis thaliana
AT5G09550 Arabidopsis thaliana
ATR0743G080 Amborella trichopoda
ATR0767G146 Amborella trichopoda
Atru.chr3.2017 Acer truncatum
Atru.chr6.1254 Acer truncatum
AUR62002501 Chenopodium quinoa
AUR62012888 Chenopodium quinoa
AUR62023687 Chenopodium quinoa
AUR62027112 Chenopodium quinoa
BcaB01g05571 Brassica carinata
BcaB01g05673 Brassica carinata
BcaB02g07439 Brassica carinata
BcaB02g08205 Brassica carinata
BcaB02g08920 Brassica carinata
BcaB05g21546 Brassica carinata
BcaB08g37198 Brassica carinata
BcaC02g07607 Brassica carinata
BcaC02g10094 Brassica carinata
BcaC02g12339 Brassica carinata
BcaC03g13261 Brassica carinata
BcaC07g40541 Brassica carinata
BcaC07g40548 Brassica carinata
BcaC08g45015 Brassica carinata
BolC2t06354H Brassica oleracea
BolC3t12994H Brassica oleracea
BolC4t22131H Brassica oleracea
BolC4t24848H Brassica oleracea
BolC6t37810H Brassica oleracea
BolC8t51088H Brassica oleracea
BolC8t51097H Brassica oleracea
BolC9t59548H Brassica oleracea
BraA02t04985Z Brassica rapa
BraA03t09762Z Brassica rapa
BraA04t15924Z Brassica rapa
BraA05t19407Z Brassica rapa
BraA07t30132Z Brassica rapa
BraA09t40652Z Brassica rapa
BraA09t40656Z Brassica rapa
BraA10t44828Z Brassica rapa
C02p03920 Brassica napus
C02p31900 Brassica napus
C03p04630 Brassica napus
C04p04990 Brassica napus
C04p32850 Brassica napus
C06p26470 Brassica napus
C08p34850 Brassica napus
C08p34920 Brassica napus
C09p66320 Brassica napus
C09p67880 Brassica napus
CAN.G490.22 Capsicum annuum
CAN.G50.7 Capsicum annuum
CAN.G50.9 Capsicum annuum
CAN.G523.12 Capsicum annuum
CAN.G6697.1 Capsicum annuum
CANSAT54G1662 Cannabis sativa
CANSAT56G4113 Cannabis sativa
CARHR107850 Cardamine hirsuta
CARHR139260 Cardamine hirsuta
CARHR170250 Cardamine hirsuta
CARHR181850 Cardamine hirsuta
CARHR203840 Cardamine hirsuta
Carub.0004s2665 Capsella rubella
Carub.0005s2666 Capsella rubella
Carub.0006s0812 Capsella rubella
Ca_17837_v3 Cicer arietinum L.
Ca_18380_v3 Cicer arietinum L.
CBR_g28815 Chara braunii
Cc01_g03620 Coffea canephora
Cc02_g20950 Coffea canephora
CDE02G0267 Ceratophyllum demersum
CDE04G0421 Ceratophyllum demersum
CDE04G3482 Ceratophyllum demersum
CDE05G1363 Ceratophyllum demersum
CDE07G1518 Ceratophyllum demersum
CDE09G0595 Ceratophyllum demersum
Cfa005733 Carpinus fangiana
Cfa008537 Carpinus fangiana
Ciclev10020158m.g Citrus clementina
Ciclev10029979m.g Citrus clementina
CiPaw.01G203400 Carya illinoinensis
CiPaw.02G125800 Carya illinoinensis
CiPaw.05G029700 Carya illinoinensis
ClCG00G003540 Citrullus lanatus
ClCG06G009950 Citrullus lanatus
ClCG09G016060 Citrullus lanatus
COL.COLO4_14406 Corchorus olitorius
COL.COLO4_32385 Corchorus olitorius
Cpa.g.sc55.30 Carica papaya
Cpa.g.sc9.238 Carica papaya
Cre09.g388467 Chlamydomonas reinhardtii
CsaV3_2G011330 Cucumis sativus L.
CsaV3_7G006910 Cucumis sativus L.
CSS0001268 Camellia sinensis var. sinensis
CSS0005636 Camellia sinensis var. sinensis
CSS0008470 Camellia sinensis var. sinensis
CSS0008607 Camellia sinensis var. sinensis
CSS0010790 Camellia sinensis var. sinensis
CSS0018888 Camellia sinensis var. sinensis
CSS0018978 Camellia sinensis var. sinensis
CSS0020445 Camellia sinensis var. sinensis
CSS0023408 Camellia sinensis var. sinensis
CSS0026710 Camellia sinensis var. sinensis
CSS0034259 Camellia sinensis var. sinensis
CSS0034483 Camellia sinensis var. sinensis
CSS0044656 Camellia sinensis var. sinensis
CSS0045076 Camellia sinensis var. sinensis
CSS0045564 Camellia sinensis var. sinensis
CSS0046211 Camellia sinensis var. sinensis
CSS0046921 Camellia sinensis var. sinensis
CSS0049648 Camellia sinensis var. sinensis
DCAR_005462 Daucus carota
DCAR_014187 Daucus carota
DCAR_021915 Daucus carota
Dinv13606 Davidia involucrata
Dinv15995 Davidia involucrata
Dinv24738 Davidia involucrata
Dinv33254 Davidia involucrata
Dinv36922 Davidia involucrata
Duzib093G2054 Durio zibethinus
Duzib132G1018 Durio zibethinus
Duzib248G0206 Durio zibethinus
ECA234G1467 Erigeron canadensis
ECA238G0296 Erigeron canadensis
ECA248G2143 Erigeron canadensis
EL10Ac3g06185 Beta vulgaris
EL10Ac9g22074 Beta vulgaris
Eucgr.A00406 Eucalyptus grandis
Eucgr.A00407 Eucalyptus grandis
Eucgr.A00408 Eucalyptus grandis
Eucgr.I02620 Eucalyptus grandis
FAN19G2231 Fragaria x ananassa
FAN23G0407 Fragaria x ananassa
FAN23G1708 Fragaria x ananassa
FAN23G2174 Fragaria x ananassa
FAN26G0093 Fragaria x ananassa
FAN26G0152 Fragaria x ananassa
FAN28G0634 Fragaria x ananassa
FAN28G1190 Fragaria x ananassa
FvH4_1g00070 Fragaria vesca
FvH4_1g19700 Fragaria vesca
Glyma.05G167800 Glycine max
Glyma.07G181700 Glycine max
Glyma.08G068100 Glycine max
Glyma.08G126200 Glycine max
Glyma.18G115100 Glycine max
Gohir.A01G231700 Gossypium hirsutum
Gohir.A03G177300 Gossypium hirsutum
Gohir.A04G115300 Gossypium hirsutum
Gohir.A13G051000 Gossypium hirsutum
Gohir.D01G221800 Gossypium hirsutum
Gohir.D02G201000 Gossypium hirsutum
Gohir.D04G156800 Gossypium hirsutum
Gohir.D13G049700 Gossypium hirsutum
Gorai.002G268400 Gossypium raimondii
Gorai.005G225600 Gossypium raimondii
Gorai.012G143800 Gossypium raimondii
Gorai.013G055600 Gossypium raimondii
GSVIVG01006107001 Vitis vinifera
GSVIVG01015656001 Vitis vinifera
GSVIVG01038268001 Vitis vinifera
HanXRQChr03g0087601 Helianthus annuus
HanXRQChr14g0448131 Helianthus annuus
HanXRQChr15g0472211 Helianthus annuus
HanXRQChr16g0514571 Helianthus annuus
Haze_10524 Corylus avellana
Haze_11104 Corylus avellana
Haze_24376 Corylus avellana
Haze_26864 Corylus avellana
Hma1.2p1_0513F.1_g169750 Hydrangea macrophylla
Hma1.2p1_1093F.1_g256200 Hydrangea macrophylla
Hma1.2p1_2714F.1_g327390 Hydrangea macrophylla
Hma1.2p1_2714F.1_g327400 Hydrangea macrophylla
Hma1.2p1_3338F.1_g335340 Hydrangea macrophylla
Hma1.2p1_3338F.1_g335350 Hydrangea macrophylla
HPP92_001206 Vanilla planifolia
HPP92_019105 Vanilla planifolia
HPP92_019829 Vanilla planifolia
Hund00376 Selenicereus undatus
Hund00377 Selenicereus undatus
Hund12299 Selenicereus undatus
Hund22674 Selenicereus undatus
Lalb_Chr02g0160131 Lupinus albus
Lalb_Chr02g0160141 Lupinus albus
Lalb_Chr05g0216331 Lupinus albus
Lalb_Chr07g0185861 Lupinus albus
Lalb_Chr09g0326001 Lupinus albus
Lalb_Chr09g0326901 Lupinus albus
Lalb_Chr13g0295601 Lupinus albus
Lalb_Chr16g0381661 Lupinus albus
Lalb_Chr16g0381671 Lupinus albus
Lalb_Chr16g0382881 Lupinus albus
Lalb_Chr16g0382891 Lupinus albus
Lj4g0027332 Lotus japonicus
Lj4g0027710 Lotus japonicus
Lju124A6G5 Lonicera japonica
Lju188A2G31 Lonicera japonica
Lju470A1G8 Lonicera japonica
Lsat_1_v5_gn_1_77261 Lactuca sativa
Lsat_1_v5_gn_2_70621 Lactuca sativa
Lsat_1_v5_gn_5_109740 Lactuca sativa
Lsat_1_v5_gn_9_68561 Lactuca sativa
Manes.02G218200 Manihot esculenta
Manes.07G037901 Manihot esculenta
Manes.07G038400 Manihot esculenta
Manes.07G039000 Manihot esculenta
Manes.10G098900 Manihot esculenta
Manes.12G126700 Manihot esculenta
Manes.13G099400 Manihot esculenta
Mapoly0034s0016 Marchantia polymorpha
MBI10_g03027_MAGBIO Magnolia biondii
MBI16_g03127_MAGBIO Magnolia biondii
MBI16_g12449_MAGBIO Magnolia biondii
MBI16_g20016_MAGBIO Magnolia biondii
MBI16_g27586_MAGBIO Magnolia biondii
MBI16_g38904_MAGBIO Magnolia biondii
MBI16_g38906_MAGBIO Magnolia biondii
MBI19_g46217_MAGBIO Magnolia biondii
MCO09G702 Micromonas commoda
MD01G1038700 Malus domestica
MD02G1000900 Malus domestica
MD04G1207800 Malus domestica
MD10G1213900 Malus domestica
MD11G1202900 Malus domestica
MD12G1166400 Malus domestica
MD15G1141900 Malus domestica
MD15G1313100 Malus domestica
Medtr4g093980 Medicago truncatula
Medtr8g088620 Medicago truncatula
MELO3C008516.2 Cucumis melo
MELO3C018603.2 Cucumis melo
Migut.N01095 Erythranthe guttata
Migut.N03007 Erythranthe guttata
Migut.N03012 Erythranthe guttata
Migut.O00492 Erythranthe guttata
MSTRG.22060 Avicennia marina
MSTRG.24540 Avicennia marina
MSTRG.24542 Avicennia marina
Nitab4.5_0000013g0230 Nicotiana tabacum
Nitab4.5_0000219g0030 Nicotiana tabacum
Nitab4.5_0000706g0030 Nicotiana tabacum
Nitab4.5_0001026g0070 Nicotiana tabacum
Nitab4.5_0001070g0020 Nicotiana tabacum
Nitab4.5_0005996g0010 Nicotiana tabacum
Nn1g05563 Nelumbo nucifera
Nn1g09384 Nelumbo nucifera
Nn1g09399 Nelumbo nucifera
Nn1g09402 Nelumbo nucifera
Nn3g18565 Nelumbo nucifera
Nn5g29890 Nelumbo nucifera
Nn7g37429 Nelumbo nucifera
Oeu014194.1 Olea europaea
Oeu050301.1 Olea europaea
Oeu056140.1 Olea europaea
Oeu061888.2 Olea europaea
Os03g0277000 Oryza sativa ssp. japonica
Os05g0304400 Oryza sativa ssp. japonica
Os05g0418000 Oryza sativa ssp. japonica
Os07g0271000 Oryza sativa ssp. japonica
Peaxi162Scf00017g00015 Petunia axillaris
Peaxi162Scf00152g00824 Petunia axillaris
Peaxi162Scf00299g00716 Petunia axillaris
Peaxi162Scf01205g00177 Petunia axillaris
PGR042G0612 Punica granatum
PGR042G1549 Punica granatum
PGR042G3742 Punica granatum
PGR142G4374 Punica granatum
PGSC0003DMG400013714 Solanum tuberosum
Phvul.002G212600 Phaseolus vulgaris
Phvul.002G248100 Phaseolus vulgaris
Phvul.003G068600 Phaseolus vulgaris
Phvul.007G117500 Phaseolus vulgaris
Phvul.010G107500 Phaseolus vulgaris
Potri.007G115300 Populus trichocarpa
Potri.007G146600 Populus trichocarpa
Potri.017G001200 Populus trichocarpa
Pp3c19_16850 Physcomitrium patens
Pp3c21_16320 Physcomitrium patens
Pp3c21_17130 Physcomitrium patens
Pp3c22_17080 Physcomitrium patens
PRCOL_00004484 Prasinoderma coloniale
Prupe.6G201200 Prunus persica
Prupe.7G271300 Prunus persica
Prupe.8G069400 Prunus persica
Psat1g157600 Pisum sativum
Psat6g160920 Pisum sativum
Psat7g063360 Pisum sativum
Psat7g101040 Pisum sativum
Psat7g246200 Pisum sativum
PSO017G6766 Papaver somniferum
PSO170G1802 Papaver somniferum
PSO170G3183 Papaver somniferum
PSO170G3780 Papaver somniferum
PSO210G6124 Papaver somniferum
PSO357G0280 Papaver somniferum
PSO675G1328 Papaver somniferum
QL10p064938 Quercus lobata
QL10p064961 Quercus lobata
QL11p025027 Quercus lobata
RcHm_v2.0_Chr2g0084291 Rosa chinensis
RcHm_v2.0_Chr2g0111261 Rosa chinensis
RcHm_v2.0_Chr6g0271061 Rosa chinensis
RcHm_v2.0_Chr7g0209621 Rosa chinensis
RcHm_v2.0_Chr7g0234401 Rosa chinensis
RcHm_v2.0_Chr7g0234411 Rosa chinensis
Rhsim09G0001400 Rhododendron simsii
Rhsim09G0001500 Rhododendron simsii
Rhsim10G0172500 Rhododendron simsii
Sabra07G0094100 Salix brachista
Sabra07G0114800 Salix brachista
Sabra17G0005600 Salix brachista
Sabra17G0030000 Salix brachista
Sabra17G0030100 Salix brachista
SalBow6G0977 Salvia bowleyana
SalBow6G6326 Salvia bowleyana
SalBow6G6883 Salvia bowleyana
Sc08g0003920 Simmondsia chinensis
Sc25g0002230 Simmondsia chinensis
Sc25g0002240 Simmondsia chinensis
Sc25g0002310 Simmondsia chinensis
Sed0002360 Sechium edule
Sed0004799 Sechium edule
Sed0009562 Sechium edule
Sed0019990 Sechium edule
SEGI_04109 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08906 Striga asiatica
SGA_v2.0_scaffold219G42560 Striga asiatica
SGA_v2.0_scaffold25G11020 Striga asiatica
SMO339G0043 Selaginella moellendorffii
Solyc01g105810.4 Solanum lycopersicum
Solyc08g015860.3 Solanum lycopersicum
Solyc12g017570.2 Solanum lycopersicum
Sopen01g048270 Solanum pennellii
Sopen08g006130 Solanum pennellii
Sopen12g008320 Solanum pennellii
Sp4g26180 Schrenkiella parvula
Sp5g03250 Schrenkiella parvula
Sp6g33800 Schrenkiella parvula
TAR362G0802 Trochodendron aralioides
TAR625G1282 Trochodendron aralioides
TAR628G1721 Trochodendron aralioides
TAR633G1548 Trochodendron aralioides
THA.LOC104799782 Tarenaya hassleriana
THA.LOC104802353 Tarenaya hassleriana
THA.LOC104804330 Tarenaya hassleriana
THA.LOC104819325 Tarenaya hassleriana
Thecc.02G129500 Theobroma cacao
Thecc.05G000400 Theobroma cacao
Thhalv10001450m.g Eutrema salsugineum
Thhalv10005975m.g Eutrema salsugineum
Thhalv10013547m.g Eutrema salsugineum
TPR.G2825 Trifolium pratense
TPR.G303 Trifolium pratense
TPR.G6750 Trifolium pratense
TWI15G0435 Tripterygium wilfordii
TWI23G0487 Tripterygium wilfordii
unitig_22.g6834 Utricularia gibba
unitig_747.g21244 Utricularia gibba
unitig_8.g3410 Utricularia gibba
vmacro00733 Vaccinium macrocarpon
vmacro13005 Vaccinium macrocarpon
vmacro14697 Vaccinium macrocarpon
VMungo0251G0579 Vigna mungo
VMungo0251G0949 Vigna mungo
Zm00001eb011180 Zea mays
Zm00001eb020700 Zea mays
Zm00001eb097240 Zea mays
Zm00001eb112710 Zea mays
Zm00001eb225640 Zea mays
Zm00001eb239840 Zea mays
Zm00001eb288200 Zea mays
Zm00001eb345650 Zea mays
Zm00001eb349240 Zea mays
Zm00001eb349250 Zea mays
Zm00001eb363000 Zea mays

User provided reference genes

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