Gene: AT3G59920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59920
  • Transcript Identifier AT3G59920.1
  • Gene Type Coding gene
  • Location Chr3 : 22135157-22138221 : positive

Gene Family Information

  • ID HOM05D001561
  • #Genes/#Species 409/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59920.1
  • symbol GDI2
  • Alias ATGDI2,RAB GDP dissociation inhibitor 2
  • uniprot O24653

Descriptions

  • Description RAB GDP dissociation inhibitor 2
  • Computational description RAB GDP dissociation inhibitor 2 (GDI2); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: guanosine nucleotide diphosphate dissociation inhibitor 1 (TAIR:AT2G44100.1); Has 1316 Blast hits to 1212 proteins in 257 species: Archae - 2; Bacteria - 2; Metazoa - 653; Fungi - 287; Plants - 181; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0007264
IEA
Gene Ontologysmall GTPase mediated signal transduction
GO:0007264
IEA
InterProsmall GTPase mediated signal transduction
GO:0015031
IEA
Gene Ontologyprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0016192
IBA
Gene Ontologyvesicle-mediated transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005092
IEA
GOA DatabaseGDP-dissociation inhibitor activity
GO:0005092
IEA
InterProGDP-dissociation inhibitor activity
GO:0005093
IEA
GOA DatabaseRab GDP-dissociation inhibitor activity
GO:0005093
IGI
IBA
Gene OntologyRab GDP-dissociation inhibitor activity1 2
GO:0005093
IEA
InterProRab GDP-dissociation inhibitor activity
GO:0005096
IEA
GOA DatabaseGTPase activator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol4
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0048046
IDA
Gene Ontologyapoplast5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000806 Rab GDI protein
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR018203 GDP dissociation inhibitor
Mapman id Description
22.3.4.4.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)