Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19900 Brassica napus
A04p27570 Brassica napus
A05p30680 Brassica napus
A06p43330 Brassica napus
Aa31LG10G6730 Aethionema arabicum
Aa31LG2G7340 Aethionema arabicum
Aa31LG5G21140 Aethionema arabicum
Aa31LG8G5710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1553 Anthoceros agrestis
Actinidia12293 Actinidia chinensis
Actinidia17820 Actinidia chinensis
Actinidia32054 Actinidia chinensis
Ah.09g232480 Amaranthus hybridus
Ah.12g053170 Amaranthus hybridus
Ah.15g090490 Amaranthus hybridus
AL270U10030 Arabidopsis lyrata
AL3G32260 Arabidopsis lyrata
AL4G30610 Arabidopsis lyrata
AL4G32100 Arabidopsis lyrata
AL5G12630 Arabidopsis lyrata
AL5G13740 Arabidopsis lyrata
AL970U10010 Arabidopsis lyrata
Aqoxy1G01661 Aquilegia oxysepala
Aqoxy2G02376 Aquilegia oxysepala
Aqoxy378s002 Aquilegia oxysepala
Aqoxy3G03431 Aquilegia oxysepala
Aqoxy6G01086 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.81TKEY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GYFX5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6INHB Arachis hypogaea
AT2G03050 Arabidopsis thaliana
AT2G34620 Arabidopsis thaliana
AT2G36000 Arabidopsis thaliana
AT3G18870 Arabidopsis thaliana
ATR0730G079 Amborella trichopoda
ATR0772G148 Amborella trichopoda
ATR1098G094 Amborella trichopoda
Atru.chr10.1122 Acer truncatum
Atru.chr11.1766 Acer truncatum
Atru.chr5.2934 Acer truncatum
Atru.chr8.1393 Acer truncatum
AUR62002686 Chenopodium quinoa
AUR62006269 Chenopodium quinoa
AUR62007047 Chenopodium quinoa
AUR62011331 Chenopodium quinoa
AUR62016730 Chenopodium quinoa
AUR62019911 Chenopodium quinoa
AUR62030143 Chenopodium quinoa
AUR62037039 Chenopodium quinoa
BcaB02g09521 Brassica carinata
BcaB06g25941 Brassica carinata
BcaB06g28905 Brassica carinata
BcaB06g28906 Brassica carinata
BcaC02g07640 Brassica carinata
BcaC04g21509 Brassica carinata
BcaC06g31205 Brassica carinata
BcaC06g34023 Brassica carinata
BcaNung06951 Brassica carinata
BolC3t14730H Brassica oleracea
BolC4t23004H Brassica oleracea
BolC4t27985H Brassica oleracea
BolC5t33385H Brassica oleracea
BolC7t43872H Brassica oleracea
BraA04t18252Z Brassica rapa
BraA05t21910Z Brassica rapa
BraA06t27219Z Brassica rapa
BraA09t38006Z Brassica rapa
C03p23300 Brassica napus
C04p65070 Brassica napus
C05p46560 Brassica napus
C07p33620 Brassica napus
CAN.G1580.1 Capsicum annuum
CAN.G1580.2 Capsicum annuum
CAN.G322.130 Capsicum annuum
CAN.G532.97 Capsicum annuum
CAN.G574.33 Capsicum annuum
CANSAT11G0738 Cannabis sativa
CANSAT35G0632 Cannabis sativa
CARHR094320 Cardamine hirsuta
CARHR128720 Cardamine hirsuta
CARHR130260 Cardamine hirsuta
CARHR145420 Cardamine hirsuta
Carub.0003s1871 Capsella rubella
Carub.0004s1630 Capsella rubella
Carub.0004s1775 Capsella rubella
Carub.0005s0190 Capsella rubella
Ca_02599_v3 Cicer arietinum L.
Ca_03604_v3 Cicer arietinum L.
Ca_04819_v3 Cicer arietinum L.
Ca_22468_v3 Cicer arietinum L.
Cc00_g02000 Coffea canephora
Cc02_g17640 Coffea canephora
Cc06_g06380 Coffea canephora
Cc06_g19140 Coffea canephora
Cc11_g12840 Coffea canephora
CDE02G1714 Ceratophyllum demersum
CDE02G3812 Ceratophyllum demersum
CDE06G2314 Ceratophyllum demersum
CDE08G0018 Ceratophyllum demersum
CDE09G0047 Ceratophyllum demersum
Cfa004974 Carpinus fangiana
Cfa008532 Carpinus fangiana
Cfa008965 Carpinus fangiana
Ciclev10012147m.g Citrus clementina
Ciclev10016031m.g Citrus clementina
Ciclev10029017m.g Citrus clementina
Ciclev10032299m.g Citrus clementina
CiPaw.05G060800 Carya illinoinensis
CiPaw.06G086600 Carya illinoinensis
CiPaw.09G019200 Carya illinoinensis
CiPaw.09G120100 Carya illinoinensis
CiPaw.10G015600 Carya illinoinensis
ClCG01G014920 Citrullus lanatus
ClCG02G005300 Citrullus lanatus
ClCG03G006520 Citrullus lanatus
ClCG05G024170 Citrullus lanatus
COL.COLO4_22949 Corchorus olitorius
COL.COLO4_31016 Corchorus olitorius
COL.COLO4_32465 Corchorus olitorius
Cpa.g.sc1.44 Carica papaya
Cpa.g.sc104.58 Carica papaya
Cpa.g.sc139.30 Carica papaya
Cpa.g.sc62.107 Carica papaya
Cre09.g408051 Chlamydomonas reinhardtii
CsaV3_1G036850 Cucumis sativus L.
CsaV3_5G032850 Cucumis sativus L.
CsaV3_6G041010 Cucumis sativus L.
CsaV3_7G010220 Cucumis sativus L.
CSS0008494 Camellia sinensis var. sinensis
CSS0012568 Camellia sinensis var. sinensis
CSS0019472 Camellia sinensis var. sinensis
CSS0022504 Camellia sinensis var. sinensis
CSS0023774 Camellia sinensis var. sinensis
CSS0028734 Camellia sinensis var. sinensis
CSS0033825 Camellia sinensis var. sinensis
CSS0035188 Camellia sinensis var. sinensis
CSS0037522 Camellia sinensis var. sinensis
CSS0039687 Camellia sinensis var. sinensis
CSS0040837 Camellia sinensis var. sinensis
DCAR_003643 Daucus carota
DCAR_020718 Daucus carota
DCAR_027422 Daucus carota
DCAR_027896 Daucus carota
DCAR_031007 Daucus carota
Dinv12324 Davidia involucrata
Dinv16661 Davidia involucrata
Dinv21527 Davidia involucrata
Duzib093G1903 Durio zibethinus
Duzib132G1079 Durio zibethinus
Duzib235G0753 Durio zibethinus
Duzib251G0578 Durio zibethinus
ECA233G5174 Erigeron canadensis
ECA236G0402 Erigeron canadensis
ECA236G4296 Erigeron canadensis
ECA246G3210 Erigeron canadensis
EL10Ac5g12437 Beta vulgaris
EL10Ac7g16813 Beta vulgaris
EL10Ac8g19633 Beta vulgaris
EL10Ac9g21731 Beta vulgaris
Eucgr.E02434 Eucalyptus grandis
Eucgr.G00475 Eucalyptus grandis
Eucgr.G02491 Eucalyptus grandis
FAN05G3032 Fragaria x ananassa
FAN07G1395 Fragaria x ananassa
FAN11G2782 Fragaria x ananassa
FAN12G3044 Fragaria x ananassa
FAN14G5498 Fragaria x ananassa
FAN15G1950 Fragaria x ananassa
FAN16G0497 Fragaria x ananassa
FAN16G0528 Fragaria x ananassa
FAN17G1523 Fragaria x ananassa
FAN20G2050 Fragaria x ananassa
FAN22G1811 Fragaria x ananassa
FAN24G0454 Fragaria x ananassa
FvH4_2g08020 Fragaria vesca
FvH4_3g05090 Fragaria vesca
FvH4_4g31180 Fragaria vesca
FvH4_6g19990 Fragaria vesca
Glyma.01G049900 Glycine max
Glyma.02G108900 Glycine max
Glyma.08G167900 Glycine max
Glyma.09G089600 Glycine max
Glyma.09G244100 Glycine max
Glyma.15G197200 Glycine max
Glyma.15G259600 Glycine max
Glyma.18G249400 Glycine max
Gohir.A04G117700 Gossypium hirsutum
Gohir.A06G203100 Gossypium hirsutum
Gohir.A10G043700 Gossypium hirsutum
Gohir.A13G131900 Gossypium hirsutum
Gohir.D02G126500 Gossypium hirsutum
Gohir.D04G159400 Gossypium hirsutum
Gohir.D06G218600 Gossypium hirsutum
Gohir.D13G135300 Gossypium hirsutum
Gorai.010G247700 Gossypium raimondii
Gorai.012G146800 Gossypium raimondii
Gorai.013G151800 Gossypium raimondii
GSVIVG01010499001 Vitis vinifera
GSVIVG01021544001 Vitis vinifera
GSVIVG01031956001 Vitis vinifera
HanXRQChr01g0013231 Helianthus annuus
HanXRQChr02g0053271 Helianthus annuus
HanXRQChr10g0280331 Helianthus annuus
HanXRQChr15g0482001 Helianthus annuus
HanXRQChr16g0505771 Helianthus annuus
Haze_11109 Corylus avellana
Haze_11996 Corylus avellana
Haze_19684 Corylus avellana
Hma1.2p1_0594F.1_g185980 Hydrangea macrophylla
Hma1.2p1_1442F.1_g283770 Hydrangea macrophylla
Hma1.2p1_2252F.1_g318150 Hydrangea macrophylla
HPP92_000997 Vanilla planifolia
HPP92_001099 Vanilla planifolia
Hund20277 Selenicereus undatus
Lalb_Chr03g0040671 Lupinus albus
Lalb_Chr08g0233421 Lupinus albus
Lalb_Chr11g0073201 Lupinus albus
Lalb_Chr11g0073211 Lupinus albus
Lalb_Chr17g0340801 Lupinus albus
Lalb_Chr25g0284751 Lupinus albus
Lj1E1169T2 Lonicera japonica
Lj1g0013225 Lotus japonicus
Lj1P1048T24 Lonicera japonica
Lj3g0005048 Lotus japonicus
Lj3P1036T14 Lonicera japonica
Lj4g0009735 Lotus japonicus
Lj5P198T46 Lonicera japonica
Lj6g0003434 Lotus japonicus
Lj6P233T17 Lonicera japonica
Lsat_1_v5_gn_3_54060 Lactuca sativa
Lsat_1_v5_gn_6_33880 Lactuca sativa
Lsat_1_v5_gn_7_27520 Lactuca sativa
Lsat_1_v5_gn_7_89121 Lactuca sativa
Manes.01G034700 Manihot esculenta
Manes.08G031700 Manihot esculenta
Manes.15G124800 Manihot esculenta
Manes.15G148100 Manihot esculenta
Mapoly0002s0047 Marchantia polymorpha
MBI14_g22871_MAGBIO Magnolia biondii
MBI16_g31216_MAGBIO Magnolia biondii
MBI17_g29498_MAGBIO Magnolia biondii
MBI18_g11224_MAGBIO Magnolia biondii
MD02G1222700 Malus domestica
MD09G1014700 Malus domestica
MD10G1082300 Malus domestica
MD14G1036200 Malus domestica
MD16G1071200 Malus domestica
Medtr2g049780 Medicago truncatula
Medtr2g067230 Medicago truncatula
Medtr5g041630 Medicago truncatula
Medtr7g081270 Medicago truncatula
MELO3C002768.2 Cucumis melo
MELO3C012106.2 Cucumis melo
MELO3C018405.2 Cucumis melo
MELO3C024579.2 Cucumis melo
Migut.E00082 Erythranthe guttata
Migut.H01349 Erythranthe guttata
Migut.L01276 Erythranthe guttata
Migut.L01837 Erythranthe guttata
Migut.M00883 Erythranthe guttata
MSTRG.10408 Avicennia marina
MSTRG.14787 Avicennia marina
MSTRG.712 Avicennia marina
Nitab4.5_0000040g0140 Nicotiana tabacum
Nitab4.5_0000308g0020 Nicotiana tabacum
Nitab4.5_0001930g0010 Nicotiana tabacum
Nitab4.5_0004172g0050 Nicotiana tabacum
Nitab4.5_0004623g0020 Nicotiana tabacum
Nitab4.5_0004752g0020 Nicotiana tabacum
Nitab4.5_0010740g0030 Nicotiana tabacum
Nitab4.5_0027164g0010 Nicotiana tabacum
Nn1g05028 Nelumbo nucifera
Nn3g20347 Nelumbo nucifera
Nn4g23205 Nelumbo nucifera
Nn6g34751 Nelumbo nucifera
Oeu015927.1 Olea europaea
Oeu039621.1 Olea europaea
Oeu052793.1 Olea europaea
Oeu052795.1 Olea europaea
Oeu055110.1 Olea europaea
Oeu062545.1 Olea europaea
Os02g0577501 Oryza sativa ssp. japonica
Os03g0360600 Oryza sativa ssp. japonica
Os03g0785200 Oryza sativa ssp. japonica
Peaxi162Scf00029g00012 Petunia axillaris
Peaxi162Scf00222g00059 Petunia axillaris
Peaxi162Scf00465g00085 Petunia axillaris
PGR035G0001 Punica granatum
PGR042G2890 Punica granatum
PGR083G1691 Punica granatum
PGR119G1320 Punica granatum
PGR142G1023 Punica granatum
PGSC0003DMG400000721 Solanum tuberosum
PGSC0003DMG400018430 Solanum tuberosum
PGSC0003DMG400018453 Solanum tuberosum
PGSC0003DMG400029310 Solanum tuberosum
PGSC0003DMG400031337 Solanum tuberosum
PGSC0003DMG400035474 Solanum tuberosum
Phvul.002G083700 Phaseolus vulgaris
Phvul.005G059600 Phaseolus vulgaris
Phvul.008G048200 Phaseolus vulgaris
Phvul.009G213100 Phaseolus vulgaris
Potri.004G150600 Populus trichocarpa
Potri.006G205000 Populus trichocarpa
Potri.008G088100 Populus trichocarpa
Potri.010G167400 Populus trichocarpa
Potri.011G081400 Populus trichocarpa
Potri.016G072200 Populus trichocarpa
Pp3c25_6950 Physcomitrium patens
Prupe.1G276500 Prunus persica
Prupe.4G085200 Prunus persica
Prupe.7G098000 Prunus persica
Prupe.8G104800 Prunus persica
Psat1g013520 Pisum sativum
Psat1g020760 Pisum sativum
Psat1g117360 Pisum sativum
Psat2g117960 Pisum sativum
Psat3g100160 Pisum sativum
PSO013G0284 Papaver somniferum
PSO135G0713 Papaver somniferum
PSO384G2057 Papaver somniferum
PSO541G4529 Papaver somniferum
PSO541G5913 Papaver somniferum
PSO675G4761 Papaver somniferum
PSO675G6798 Papaver somniferum
PSO832G2716 Papaver somniferum
QL03p068643 Quercus lobata
QL05p055184 Quercus lobata
QL07p037435 Quercus lobata
QL11p041746 Quercus lobata
QL11p042311 Quercus lobata
RcHm_v2.0_Chr3g0475441 Rosa chinensis
RcHm_v2.0_Chr4g0439561 Rosa chinensis
RcHm_v2.0_Chr5g0014781 Rosa chinensis
RcHm_v2.0_Chr6g0262541 Rosa chinensis
Rhsim05G0186700 Rhododendron simsii
Sabra04G0100100 Salix brachista
Sabra06G0158000 Salix brachista
Sabra10G0127200 Salix brachista
Sabra11G0065000 Salix brachista
Sabra16G0075100 Salix brachista
SalBow2G0883 Salvia bowleyana
SalBow4G0200 Salvia bowleyana
SalBow6G6552 Salvia bowleyana
SalBow8G0091 Salvia bowleyana
SalBow8G4987 Salvia bowleyana
Sc04g0008000 Simmondsia chinensis
Sc20g0006640 Simmondsia chinensis
Sed0014117 Sechium edule
Sed0016619 Sechium edule
Sed0018709 Sechium edule
Sed0024205 Sechium edule
SEGI_01405 Sequoiadendron giganteum
SEGI_23718 Sequoiadendron giganteum
SEGI_32809 Sequoiadendron giganteum
SEGI_38269 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38963 Striga asiatica
SGA_v2.0_scaffold184G40032 Striga asiatica
SGA_v2.0_scaffold1G00203 Striga asiatica
SGA_v2.0_scaffold63G21642 Striga asiatica
SMO364G0358 Selaginella moellendorffii
Solyc01g007750.3 Solanum lycopersicum
Solyc01g109550.2 Solanum lycopersicum
Solyc02g021430.1 Solanum lycopersicum
Solyc05g007840.3 Solanum lycopersicum
Sopen01g003290 Solanum pennellii
Sopen01g051740 Solanum pennellii
Sopen02g005910 Solanum pennellii
Sopen05g003700 Solanum pennellii
Sp2g14050 Schrenkiella parvula
Sp3g16970 Schrenkiella parvula
Sp4g16890 Schrenkiella parvula
Sp4g18260 Schrenkiella parvula
TAR369G0564 Trochodendron aralioides
TAR371G0335 Trochodendron aralioides
TAR376G0325 Trochodendron aralioides
TAR623G1455 Trochodendron aralioides
TAR629G2603 Trochodendron aralioides
THA.LOC104800070 Tarenaya hassleriana
THA.LOC104801801 Tarenaya hassleriana
THA.LOC104812680 Tarenaya hassleriana
THA.LOC104823635 Tarenaya hassleriana
Thecc.02G121700 Theobroma cacao
Thecc.02G344000 Theobroma cacao
Thecc.05G101300 Theobroma cacao
Thecc.06G144900 Theobroma cacao
Thhalv10004730m.g Eutrema salsugineum
Thhalv10016909m.g Eutrema salsugineum
Thhalv10016991m.g Eutrema salsugineum
Thhalv10022350m.g Eutrema salsugineum
TPR.G21108 Trifolium pratense
TPR.G29113 Trifolium pratense
TPR.G33842 Trifolium pratense
TPR.G39219 Trifolium pratense
TWI31G0045 Tripterygium wilfordii
TWI53G0813 Tripterygium wilfordii
TWI73G0282 Tripterygium wilfordii
TWI79G1773 Tripterygium wilfordii
unitig_21.g20420 Utricularia gibba
unitig_22.g5995 Utricularia gibba
unitig_26.g8992 Utricularia gibba
unitig_749.g14107 Utricularia gibba
vmacro07463 Vaccinium macrocarpon
vmacro20110 Vaccinium macrocarpon
VMungo1080G0783 Vigna mungo
VMungo1215G1785 Vigna mungo
VMungo1309G2939 Vigna mungo
VMungo1383G2205 Vigna mungo
Zm00001eb017630 Zea mays
Zm00001eb183160 Zea mays

User provided reference genes

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