Gene: Sopen05g003700

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003700
  • Transcript Identifier Sopen05g003700.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 2490275-2497936 : positive

Gene Family Information

  • ID HOM05D001557
  • #Genes/#Species 410/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003700.1

Descriptions

  • Description A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. | EMBRYO DEFECTIVE 93 (EMB93) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: cellular response to singlet oxygen, embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related | BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G03050
GO:0071452
ISO
PLAZA Integrative Orthologycellular response to singlet oxygen AT2G03050
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G03050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IEA
InterProdouble-stranded DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G03050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003690 Transcription termination factor, mitochondrial/chloroplastic
IPR038538 MTERF superfamily, mitochondrial/chloroplastic
Mapman id Description
15.6.2.2 RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF)