Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26410 Brassica napus
A05p39180 Brassica napus
A07p18620 Brassica napus
Aa31LG5G8060 Aethionema arabicum
Actinidia03703 Actinidia chinensis
Ah.14g088460 Amaranthus hybridus
AL3G21100 Arabidopsis lyrata
AL4G22080 Arabidopsis lyrata
Aqoxy1G01162 Aquilegia oxysepala
Aqoxy2G01777 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GB7Y3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3NQ3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1Y5X8 Arachis hypogaea
AT2G28085 Arabidopsis thaliana
AT3G09870 Arabidopsis thaliana
ATR1136G022 Amborella trichopoda
Atru.chr3.3549 Acer truncatum
Atru.chr3.3550 Acer truncatum
Atru.chr8.1810 Acer truncatum
Atru.chr8.1811 Acer truncatum
Atru.chr8.1814 Acer truncatum
Atru.chr8.1815 Acer truncatum
Atru.chr8.1816 Acer truncatum
AUR62012584 Chenopodium quinoa
AUR62014617 Chenopodium quinoa
AUR62040347 Chenopodium quinoa
AUR62042497 Chenopodium quinoa
BcaB01g03089 Brassica carinata
BcaB02g10136 Brassica carinata
BcaC01g04957 Brassica carinata
BcaC02g10942 Brassica carinata
BcaC05g29498 Brassica carinata
BcaC05g29709 Brassica carinata
BolC3t15514H Brassica oleracea
BolC4t23846H Brassica oleracea
BolC5t34477H Brassica oleracea
BraA03t11856Z Brassica rapa
BraA05t22707Z Brassica rapa
BraA07t29575Z Brassica rapa
C03p31710 Brassica napus
C04p23440 Brassica napus
C05p58230 Brassica napus
CAN.G1169.15 Capsicum annuum
CAN.G1169.18 Capsicum annuum
CAN.G1169.20 Capsicum annuum
CAN.G1169.21 Capsicum annuum
CAN.G1169.22 Capsicum annuum
CAN.G1755.6 Capsicum annuum
CAN.G488.3 Capsicum annuum
CAN.G488.4 Capsicum annuum
CAN.G488.5 Capsicum annuum
CAN.G488.6 Capsicum annuum
CAN.G546.8 Capsicum annuum
CAN.G631.64 Capsicum annuum
CAN.G631.66 Capsicum annuum
CAN.G631.67 Capsicum annuum
CAN.G900.35 Capsicum annuum
CAN.G900.36 Capsicum annuum
CAN.G900.37 Capsicum annuum
CANSAT54G2630 Cannabis sativa
CANSAT80G0144 Cannabis sativa
CANSAT80G1990 Cannabis sativa
CARHR084380 Cardamine hirsuta
CARHR120820 Cardamine hirsuta
Carub.0003s0896 Capsella rubella
Carub.0003s0918 Capsella rubella
Carub.0004s0885 Capsella rubella
Ca_01387_v3 Cicer arietinum L.
Ca_08859_v3 Cicer arietinum L.
Ca_11496_v3 Cicer arietinum L.
Cc01_g10550 Coffea canephora
CDE02G3591 Ceratophyllum demersum
CDE02G3783 Ceratophyllum demersum
CDE09G0175 Ceratophyllum demersum
CDE09G0333 Ceratophyllum demersum
Cfa017608 Carpinus fangiana
Cfa017609 Carpinus fangiana
Cfa017610 Carpinus fangiana
Cfa017611 Carpinus fangiana
Cfa017613 Carpinus fangiana
Ciclev10013118m.g Citrus clementina
Ciclev10013167m.g Citrus clementina
Ciclev10013305m.g Citrus clementina
Ciclev10013517m.g Citrus clementina
Ciclev10013732m.g Citrus clementina
Ciclev10030059m.g Citrus clementina
Ciclev10030078m.g Citrus clementina
CiPaw.09G172600 Carya illinoinensis
CiPaw.13G118700 Carya illinoinensis
ClCG02G021410 Citrullus lanatus
ClCG03G002720 Citrullus lanatus
ClCG04G009290 Citrullus lanatus
COL.COLO4_26964 Corchorus olitorius
COL.COLO4_26965 Corchorus olitorius
COL.COLO4_26970 Corchorus olitorius
COL.COLO4_26971 Corchorus olitorius
COL.COLO4_34700 Corchorus olitorius
Cpa.g.sc54.76 Carica papaya
Cpa.g.sc54.77 Carica papaya
Cpa.g.sc54.78 Carica papaya
CsaV3_1G013410 Cucumis sativus L.
CsaV3_6G014200 Cucumis sativus L.
CsaV3_6G039880 Cucumis sativus L.
CSS0011505 Camellia sinensis var. sinensis
CSS0032131 Camellia sinensis var. sinensis
CSS0036444 Camellia sinensis var. sinensis
CSS0037855 Camellia sinensis var. sinensis
CSS0042595 Camellia sinensis var. sinensis
CSS0043296 Camellia sinensis var. sinensis
CSS0047069 Camellia sinensis var. sinensis
DCAR_006107 Daucus carota
DCAR_014994 Daucus carota
DCAR_020818 Daucus carota
Dinv34703 Davidia involucrata
Dinv37315 Davidia involucrata
Duzib093G1730 Durio zibethinus
Duzib168G1009 Durio zibethinus
Duzib170G1023 Durio zibethinus
ECA233G1003 Erigeron canadensis
ECA233G1315 Erigeron canadensis
ECA248G3335 Erigeron canadensis
EL10Ac7g16626 Beta vulgaris
EL10As6g23706 Beta vulgaris
Eucgr.A01687 Eucalyptus grandis
Eucgr.L01690 Eucalyptus grandis
FAN02G2529 Fragaria x ananassa
FAN05G2097 Fragaria x ananassa
FAN05G3206 Fragaria x ananassa
FAN14G1299 Fragaria x ananassa
FAN14G1618 Fragaria x ananassa
FAN16G0986 Fragaria x ananassa
FAN16G3511 Fragaria x ananassa
FAN21G3490 Fragaria x ananassa
FvH4_3g31150 Fragaria vesca
FvH4_6g16370 Fragaria vesca
FvH4_6g16380 Fragaria vesca
Glyma.03G183000 Glycine max
Glyma.03G183100 Glycine max
Glyma.03G183200 Glycine max
Glyma.10G055600 Glycine max
Glyma.10G055800 Glycine max
Glyma.10G055900 Glycine max
Glyma.10G056000 Glycine max
Glyma.10G056200 Glycine max
Glyma.10G056300 Glycine max
Glyma.10G056400 Glycine max
Glyma.10G056500 Glycine max
Glyma.10G056600 Glycine max
Glyma.11G194800 Glycine max
Glyma.12G079300 Glycine max
Glyma.12G177400 Glycine max
Glyma.13G142700 Glycine max
Glyma.13G142800 Glycine max
Glyma.13G142900 Glycine max
Glyma.13G143000 Glycine max
Glyma.13G143100 Glycine max
Glyma.13G143200 Glycine max
Glyma.13G323300 Glycine max
Glyma.19G183700 Glycine max
Glyma.19G183800 Glycine max
Glyma.19G183900 Glycine max
Gohir.A09G146800 Gossypium hirsutum
Gohir.A09G146900 Gossypium hirsutum
Gohir.A13G232400 Gossypium hirsutum
Gohir.D09G142400 Gossypium hirsutum
Gohir.D09G142420 Gossypium hirsutum
Gohir.D09G142440 Gossypium hirsutum
Gohir.D09G142460 Gossypium hirsutum
Gohir.D09G142480 Gossypium hirsutum
Gohir.D09G142500 Gossypium hirsutum
Gohir.D09G142600 Gossypium hirsutum
Gohir.D13G238000 Gossypium hirsutum
Gorai.002G162000 Gossypium raimondii
Gorai.006G163400 Gossypium raimondii
Gorai.006G163500 Gossypium raimondii
Gorai.006G163600 Gossypium raimondii
Gorai.006G163800 Gossypium raimondii
Gorai.006G163900 Gossypium raimondii
Gorai.006G164000 Gossypium raimondii
Gorai.006G164100 Gossypium raimondii
Gorai.013G268800 Gossypium raimondii
GSVIVG01031507001 Vitis vinifera
GSVIVG01031508001 Vitis vinifera
HanXRQChr01g0017891 Helianthus annuus
HanXRQChr01g0017911 Helianthus annuus
HanXRQChr01g0025331 Helianthus annuus
HanXRQChr01g0027661 Helianthus annuus
HanXRQChr08g0215431 Helianthus annuus
HanXRQChr11g0346191 Helianthus annuus
HanXRQChr11g0346201 Helianthus annuus
HanXRQChr11g0350371 Helianthus annuus
HanXRQChr13g0396601 Helianthus annuus
Haze_20545 Corylus avellana
Haze_20548 Corylus avellana
Haze_20549 Corylus avellana
Hma1.2p1_0205F.1_g087070 Hydrangea macrophylla
Hma1.2p1_0344F.1_g131070 Hydrangea macrophylla
Lalb_Chr01g0018711 Lupinus albus
Lalb_Chr20g0112611 Lupinus albus
Lalb_Chr24g0394831 Lupinus albus
Lalb_Chr25g0288991 Lupinus albus
Lj1C207T2 Lonicera japonica
Lj1C207T3 Lonicera japonica
Lj1g0024124 Lotus japonicus
Lj3g0008571 Lotus japonicus
Lj3g0019702 Lotus japonicus
Lsat_1_v5_gn_1_52081 Lactuca sativa
Lsat_1_v5_gn_1_63001 Lactuca sativa
Lsat_1_v5_gn_6_43700 Lactuca sativa
Lsat_1_v5_gn_8_28901 Lactuca sativa
Lsat_1_v5_gn_8_28921 Lactuca sativa
Manes.08G010100 Manihot esculenta
Manes.08G010200 Manihot esculenta
Manes.08G010202 Manihot esculenta
Manes.08G010300 Manihot esculenta
Manes.09G066500 Manihot esculenta
Manes.11G150600 Manihot esculenta
Manes.11G150700 Manihot esculenta
MBI18_g04979_MAGBIO Magnolia biondii
MBI18_g04981_MAGBIO Magnolia biondii
MBI18_g04982_MAGBIO Magnolia biondii
MBI18_g10198_MAGBIO Magnolia biondii
MBI18_g38339_MAGBIO Magnolia biondii
MD00G1033700 Malus domestica
MD04G1093700 Malus domestica
MD11G1145300 Malus domestica
MD12G1113400 Malus domestica
Medtr1g063260 Medicago truncatula
Medtr1g063280 Medicago truncatula
Medtr1g063290 Medicago truncatula
Medtr1g063300 Medicago truncatula
Medtr1g063310 Medicago truncatula
Medtr1g063330 Medicago truncatula
Medtr1g063340 Medicago truncatula
Medtr2g095430 Medicago truncatula
Medtr4g057800 Medicago truncatula
Medtr4g057810 Medicago truncatula
Medtr7g101890 Medicago truncatula
Medtr7g101920 Medicago truncatula
MELO3C004966.2 Cucumis melo
MELO3C024464.2 Cucumis melo
MELO3C026914.2 Cucumis melo
Migut.D02260 Erythranthe guttata
Migut.J00498 Erythranthe guttata
Migut.J00657 Erythranthe guttata
Migut.J00659 Erythranthe guttata
Migut.J00660 Erythranthe guttata
Migut.L01699 Erythranthe guttata
Migut.L01702 Erythranthe guttata
Migut.N02572 Erythranthe guttata
Nitab4.5_0000063g0060 Nicotiana tabacum
Nitab4.5_0000063g0070 Nicotiana tabacum
Nitab4.5_0000063g0080 Nicotiana tabacum
Nitab4.5_0000063g0100 Nicotiana tabacum
Nitab4.5_0000106g0420 Nicotiana tabacum
Nitab4.5_0000578g0190 Nicotiana tabacum
Nitab4.5_0000814g0030 Nicotiana tabacum
Nitab4.5_0000814g0060 Nicotiana tabacum
Nitab4.5_0000814g0070 Nicotiana tabacum
Nitab4.5_0002044g0010 Nicotiana tabacum
Nitab4.5_0002186g0060 Nicotiana tabacum
Nitab4.5_0002632g0050 Nicotiana tabacum
Nitab4.5_0010279g0030 Nicotiana tabacum
Nitab4.5_0014813g0010 Nicotiana tabacum
Nn2g11581 Nelumbo nucifera
Nn2g11584 Nelumbo nucifera
Nn2g11587 Nelumbo nucifera
Nn2g11588 Nelumbo nucifera
Nn2g11589 Nelumbo nucifera
Nn2g11592 Nelumbo nucifera
Nn2g11593 Nelumbo nucifera
Nn2g11594 Nelumbo nucifera
Nn2g13776 Nelumbo nucifera
Nn2g13779 Nelumbo nucifera
Nn2g13781 Nelumbo nucifera
Nn5g28976 Nelumbo nucifera
Nn6g35149 Nelumbo nucifera
Oeu005021.1 Olea europaea
Oeu018374.1 Olea europaea
Oeu018482.1 Olea europaea
Oeu045059.1 Olea europaea
Peaxi162Scf00311g00081 Petunia axillaris
Peaxi162Scf00311g00092 Petunia axillaris
Peaxi162Scf00311g00101 Petunia axillaris
Peaxi162Scf00351g00051 Petunia axillaris
Peaxi162Scf00701g00012 Petunia axillaris
Peaxi162Scf01139g00013 Petunia axillaris
Peaxi162Scf01159g00023 Petunia axillaris
PGR004G2482 Punica granatum
PGR094G0001 Punica granatum
PGR094G0003 Punica granatum
PGR094G0005 Punica granatum
PGR102G0286 Punica granatum
PGR102G1100 Punica granatum
PGSC0003DMG400003884 Solanum tuberosum
PGSC0003DMG400003885 Solanum tuberosum
PGSC0003DMG400007162 Solanum tuberosum
PGSC0003DMG400008070 Solanum tuberosum
PGSC0003DMG400010473 Solanum tuberosum
PGSC0003DMG400028186 Solanum tuberosum
PGSC0003DMG400028187 Solanum tuberosum
PGSC0003DMG400028188 Solanum tuberosum
PGSC0003DMG400028189 Solanum tuberosum
PGSC0003DMG400028299 Solanum tuberosum
PGSC0003DMG400046444 Solanum tuberosum
Phvul.001G178900 Phaseolus vulgaris
Phvul.001G179000 Phaseolus vulgaris
Phvul.005G131801 Phaseolus vulgaris
Phvul.007G219300 Phaseolus vulgaris
Phvul.007G219400 Phaseolus vulgaris
Phvul.007G219500 Phaseolus vulgaris
Phvul.007G219600 Phaseolus vulgaris
Phvul.007G219700 Phaseolus vulgaris
Phvul.011G083900 Phaseolus vulgaris
Potri.006G125100 Populus trichocarpa
Potri.010G226400 Populus trichocarpa
Potri.016G092400 Populus trichocarpa
Prupe.6G108300 Prunus persica
Prupe.6G108400 Prunus persica
Prupe.6G108500 Prunus persica
Prupe.6G232300 Prunus persica
Psat0s2933g0120 Pisum sativum
Psat0s3241g0120 Pisum sativum
Psat3g042440 Pisum sativum
Psat6g072880 Pisum sativum
Psat6g074240 Pisum sativum
PSO063G5329 Papaver somniferum
PSO339G0220 Papaver somniferum
PSO339G1978 Papaver somniferum
PSO339G2143 Papaver somniferum
PSO339G2379 Papaver somniferum
PSO339G3689 Papaver somniferum
PSO339G4323 Papaver somniferum
PSO407G0342 Papaver somniferum
PSO801G0027 Papaver somniferum
PSO801G0055 Papaver somniferum
PSO801G0121 Papaver somniferum
PSO801G0647 Papaver somniferum
QL01p015848 Quercus lobata
QL07p043574 Quercus lobata
RcHm_v2.0_Chr3g0470221 Rosa chinensis
RcHm_v2.0_Chr3g0470231 Rosa chinensis
RcHm_v2.0_Chr5g0057771 Rosa chinensis
RcHm_v2.0_Chr5g0057781 Rosa chinensis
Rhsim01G0212200 Rhododendron simsii
Rhsim04G0144300 Rhododendron simsii
Sabra06G0098800 Salix brachista
Sabra16G0098000 Salix brachista
SalBow3G0595 Salvia bowleyana
SalBow3G3155 Salvia bowleyana
SalBow5G3930 Salvia bowleyana
SalBow5G4019 Salvia bowleyana
Sc02g0001620 Simmondsia chinensis
Sc02g0001630 Simmondsia chinensis
Sc05g0008420 Simmondsia chinensis
Sed0002400 Sechium edule
Sed0011485 Sechium edule
Sed0013058 Sechium edule
SGA_v2.0_scaffold127G34044 Striga asiatica
SGA_v2.0_scaffold40G15518 Striga asiatica
SGA_v2.0_scaffold75G24846 Striga asiatica
Solyc06g074950.1 Solanum lycopersicum
Solyc09g008170.3 Solanum lycopersicum
Solyc09g008175.1 Solanum lycopersicum
Solyc10g084010.1 Solanum lycopersicum
Solyc10g084020.1 Solanum lycopersicum
Solyc10g150147.1 Solanum lycopersicum
Solyc10g150148.1 Solanum lycopersicum
Solyc11g069093.1 Solanum lycopersicum
Sopen06g031350 Solanum pennellii
Sopen09g002970 Solanum pennellii
Sopen09g002980 Solanum pennellii
Sopen10g033460 Solanum pennellii
Sopen10g033480 Solanum pennellii
Sopen11g027820 Solanum pennellii
Sp3g08210 Schrenkiella parvula
Sp4g10880 Schrenkiella parvula
TAR369G0306 Trochodendron aralioides
TAR623G1087 Trochodendron aralioides
TAR633G0735 Trochodendron aralioides
TAR636G1002 Trochodendron aralioides
THA.LOC104816348 Tarenaya hassleriana
THA.LOC104824506 Tarenaya hassleriana
THA.LOC104826382 Tarenaya hassleriana
THA.LOC104827408 Tarenaya hassleriana
Thecc.05G065400 Theobroma cacao
Thecc.05G065800 Theobroma cacao
Thecc.05G065900 Theobroma cacao
Thecc.05G066000 Theobroma cacao
Thecc.05G066100 Theobroma cacao
Thecc.05G066200 Theobroma cacao
Thecc.05G066300 Theobroma cacao
Thecc.05G066400 Theobroma cacao
Thecc.05G066500 Theobroma cacao
Thecc.09G348200 Theobroma cacao
Thecc.09G348300 Theobroma cacao
Thecc.10G121000 Theobroma cacao
Thhalv10017524m.g Eutrema salsugineum
TPR.G11263 Trifolium pratense
TPR.G11265 Trifolium pratense
TPR.G11278 Trifolium pratense
TPR.G11280 Trifolium pratense
TPR.G11281 Trifolium pratense
TPR.G11527 Trifolium pratense
TPR.G6120 Trifolium pratense
TPR.G9366 Trifolium pratense
TPR.G9368 Trifolium pratense
TWI31G1140 Tripterygium wilfordii
TWI53G1569 Tripterygium wilfordii
TWI79G1515 Tripterygium wilfordii
VMungo0720G1097 Vigna mungo
VMungo0720G1135 Vigna mungo
VMungo0720G1189 Vigna mungo
VMungo1080G0562 Vigna mungo
VMungo1127G0152 Vigna mungo
VMungo1383G0801 Vigna mungo
VMungo1383G3396 Vigna mungo

User provided reference genes

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