Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26240 Brassica napus
A03p29400 Brassica napus
A09p13720 Brassica napus
Aa31LG2G840 Aethionema arabicum
Aa31LG9G10750 Aethionema arabicum
Aa31LG9G10780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.901 Anthoceros agrestis
Actinidia02006 Actinidia chinensis
Actinidia02007 Actinidia chinensis
Actinidia14561 Actinidia chinensis
Actinidia27382 Actinidia chinensis
Actinidia27383 Actinidia chinensis
Actinidia33752 Actinidia chinensis
Ah.12g056910 Amaranthus hybridus
Ah.12g056920 Amaranthus hybridus
Ah.12g056940 Amaranthus hybridus
AL2G11700 Arabidopsis lyrata
AL4G16290 Arabidopsis lyrata
AL5G22020 Arabidopsis lyrata
AL6G45890 Arabidopsis lyrata
AL6G46080 Arabidopsis lyrata
AL7G30360 Arabidopsis lyrata
Aqoxy3G00056 Aquilegia oxysepala
Aqoxy7G00337 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E4NWP9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HI8SJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB6AVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q03LIP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RBC6WC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4KI49 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TG518A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3TBCC Arachis hypogaea
AT1G63520 Arabidopsis thaliana
AT2G25120 Arabidopsis thaliana
AT3G43990 Arabidopsis thaliana
AT4G11450 Arabidopsis thaliana
AT4G11560 Arabidopsis thaliana
AT4G23120 Arabidopsis thaliana
ATR0680G014 Amborella trichopoda
ATR0680G298 Amborella trichopoda
Atru.chr9.2190 Acer truncatum
Atru.chr9.2191 Acer truncatum
AUR62010676 Chenopodium quinoa
AUR62010679 Chenopodium quinoa
AUR62010680 Chenopodium quinoa
AUR62017202 Chenopodium quinoa
AUR62017203 Chenopodium quinoa
AUR62017207 Chenopodium quinoa
BcaB01g01516 Brassica carinata
BcaB01g01539 Brassica carinata
BcaB01g01656 Brassica carinata
BcaB01g01657 Brassica carinata
BcaB01g01658 Brassica carinata
BcaB01g02692 Brassica carinata
BcaB05g23821 Brassica carinata
BcaB05g23826 Brassica carinata
BcaB06g28681 Brassica carinata
BcaC01g04626 Brassica carinata
BcaC02g07832 Brassica carinata
BcaC03g14142 Brassica carinata
BcaC03g16347 Brassica carinata
BcaC03g16350 Brassica carinata
BcaC04g21076 Brassica carinata
BcaC04g21078 Brassica carinata
BcaC04g21150 Brassica carinata
BcaC04g21151 Brassica carinata
BcaNung03251 Brassica carinata
BcaNung07198 Brassica carinata
BolC2t07531H Brassica oleracea
BolC2t10190H Brassica oleracea
BolC3t15864H Brassica oleracea
BolC4t27767H Brassica oleracea
BolC9t54548H Brassica oleracea
BolC9t56338H Brassica oleracea
BolC9t56340H Brassica oleracea
BolC9t56341H Brassica oleracea
BolC9t56342H Brassica oleracea
BolC9t56433H Brassica oleracea
BolC9t56434H Brassica oleracea
BraA02t07622Z Brassica rapa
BraA02t07625Z Brassica rapa
BraA09t37023Z Brassica rapa
BraA09t38327Z Brassica rapa
BraA09t38328Z Brassica rapa
BraA09t38407Z Brassica rapa
BraA09t38408Z Brassica rapa
C02p41740 Brassica napus
C03p35530 Brassica napus
C04p62840 Brassica napus
C09p16370 Brassica napus
CAN.G1842.1 Capsicum annuum
CAN.G18464.1 Capsicum annuum
CAN.G4310.1 Capsicum annuum
CAN.G59.25 Capsicum annuum
CAN.G774.28 Capsicum annuum
CAN.G774.29 Capsicum annuum
CAN.G774.30 Capsicum annuum
CAN.G774.33 Capsicum annuum
CAN.G774.34 Capsicum annuum
CAN.G774.37 Capsicum annuum
CAN.G774.38 Capsicum annuum
CAN.G774.40 Capsicum annuum
CAN.G774.45 Capsicum annuum
CAN.G827.4 Capsicum annuum
CANSAT21G0813 Cannabis sativa
CARHR047860 Cardamine hirsuta
CARHR101260 Cardamine hirsuta
CARHR101270 Cardamine hirsuta
CARHR230190 Cardamine hirsuta
CARHR254850 Cardamine hirsuta
CARHR255100 Cardamine hirsuta
Carub.0002s0135 Capsella rubella
Carub.0004s0472 Capsella rubella
Carub.0005s0919 Capsella rubella
Carub.0005s0921 Capsella rubella
Carub.0005s0922 Capsella rubella
Carub.0005s0975 Capsella rubella
Carub.0006s3038 Capsella rubella
Carub.0006s3060 Capsella rubella
Ca_17533_v3 Cicer arietinum L.
Ca_17534_v3 Cicer arietinum L.
Ca_24550_v3 Cicer arietinum L.
Ca_24551_v3 Cicer arietinum L.
CBR_g52340 Chara braunii
Cc06_g18970 Coffea canephora
Cc06_g18990 Coffea canephora
Cc08_g14720 Coffea canephora
Cc08_g14730 Coffea canephora
Cc10_g03930 Coffea canephora
CDE02G2066 Ceratophyllum demersum
CDE06G0865 Ceratophyllum demersum
CDE06G2727 Ceratophyllum demersum
CDE08G1696 Ceratophyllum demersum
CDE09G0464 Ceratophyllum demersum
Cfa012182 Carpinus fangiana
Cfa012183 Carpinus fangiana
Ciclev10003744m.g Citrus clementina
Ciclev10019223m.g Citrus clementina
Ciclev10019291m.g Citrus clementina
CiPaw.11G135400 Carya illinoinensis
CiPaw.11G135500 Carya illinoinensis
CiPaw.12G093200 Carya illinoinensis
CiPaw.12G093300 Carya illinoinensis
ClCG01G002710 Citrullus lanatus
ClCG01G002730 Citrullus lanatus
COL.COLO4_34461 Corchorus olitorius
COL.COLO4_34462 Corchorus olitorius
Cpa.g.sc74.47 Carica papaya
Cpa.g.sc74.49 Carica papaya
Cpa.g.sc74.50 Carica papaya
CsaV3_5G002810 Cucumis sativus L.
CsaV3_5G002820 Cucumis sativus L.
CSS0008990 Camellia sinensis var. sinensis
CSS0025049 Camellia sinensis var. sinensis
CSS0043015 Camellia sinensis var. sinensis
CSS0049763 Camellia sinensis var. sinensis
CSS0049902 Camellia sinensis var. sinensis
DCAR_000609 Daucus carota
DCAR_000610 Daucus carota
DCAR_000611 Daucus carota
DCAR_006741 Daucus carota
Dinv37642 Davidia involucrata
Dinv38944 Davidia involucrata
Duzib068G0032 Durio zibethinus
Duzib068G0924 Durio zibethinus
Duzib084G0397 Durio zibethinus
Duzib205G1526 Durio zibethinus
Duzib205G1550 Durio zibethinus
ECA233G0801 Erigeron canadensis
ECA233G1788 Erigeron canadensis
ECA240G1190 Erigeron canadensis
ECA240G1195 Erigeron canadensis
ECA240G1388 Erigeron canadensis
EL10Ac5g13060 Beta vulgaris
EL10Ac5g13061 Beta vulgaris
EL10Ac8g19542 Beta vulgaris
Eucgr.E00595 Eucalyptus grandis
Eucgr.E00596 Eucalyptus grandis
FAN03G2090 Fragaria x ananassa
FAN04G1177 Fragaria x ananassa
FAN04G2422 Fragaria x ananassa
FAN08G1592 Fragaria x ananassa
FAN13G3007 Fragaria x ananassa
FAN18G4468 Fragaria x ananassa
FAN25G1299 Fragaria x ananassa
FvH4_4g00591 Fragaria vesca
FvH4_5g02390 Fragaria vesca
FvH4_5g02400 Fragaria vesca
Glyma.01G220100 Glycine max
Glyma.01G220200 Glycine max
Glyma.01G220300 Glycine max
Glyma.05G207800 Glycine max
Glyma.05G207900 Glycine max
Glyma.08G014500 Glycine max
Glyma.08G014600 Glycine max
Glyma.11G023400 Glycine max
Glyma.11G023500 Glycine max
Glyma.19G131300 Glycine max
Gohir.A03G016400 Gossypium hirsutum
Gohir.A08G182600 Gossypium hirsutum
Gohir.A08G182700 Gossypium hirsutum
Gohir.A11G022300 Gossypium hirsutum
Gohir.D03G151500 Gossypium hirsutum
Gohir.D08G201100 Gossypium hirsutum
Gohir.D08G201200 Gossypium hirsutum
Gohir.D11G022000 Gossypium hirsutum
Gorai.003G158900 Gossypium raimondii
Gorai.004G212000 Gossypium raimondii
Gorai.004G212100 Gossypium raimondii
Gorai.007G023400 Gossypium raimondii
GSVIVG01019755001 Vitis vinifera
HanXRQChr03g0086741 Helianthus annuus
HanXRQChr07g0187221 Helianthus annuus
HanXRQChr07g0189841 Helianthus annuus
HanXRQChr13g0394271 Helianthus annuus
HanXRQChr17g0533651 Helianthus annuus
HanXRQChr17g0533661 Helianthus annuus
Haze_08834 Corylus avellana
Haze_08835 Corylus avellana
Hma1.2p1_0792F.1_g218570 Hydrangea macrophylla
Hma1.2p1_0896F.1_g234010 Hydrangea macrophylla
Hma1.2p1_0896F.1_g234020 Hydrangea macrophylla
Hma1.2p1_2966F.1_g330990 Hydrangea macrophylla
HPP92_005042 Vanilla planifolia
HPP92_005071 Vanilla planifolia
HPP92_005072 Vanilla planifolia
HPP92_010811 Vanilla planifolia
HPP92_025727 Vanilla planifolia
Hund11469 Selenicereus undatus
Hund11470 Selenicereus undatus
Hund11471 Selenicereus undatus
Hund14801 Selenicereus undatus
Lalb_Chr05g0224781 Lupinus albus
Lalb_Chr09g0320941 Lupinus albus
Lalb_Chr09g0320961 Lupinus albus
Lalb_Chr09g0320971 Lupinus albus
Lalb_Chr16g0389971 Lupinus albus
Lalb_Chr16g0389981 Lupinus albus
Lalb_Chr22g0359321 Lupinus albus
Lj2A192G36 Lonicera japonica
Lj2C192T8 Lonicera japonica
Lj4g0001385 Lotus japonicus
Lj4g0003948 Lotus japonicus
Lj8A228T25 Lonicera japonica
Lj8A231T12 Lonicera japonica
LjContig00312_ERROPOS870357g0010973 Lotus japonicus
Lsat_1_v5_gn_6_6481 Lactuca sativa
Lsat_1_v5_gn_6_6520 Lactuca sativa
Lsat_1_v5_gn_6_87341 Lactuca sativa
Lsat_1_v5_gn_6_87361 Lactuca sativa
Lsat_1_v5_gn_6_87381 Lactuca sativa
Lsat_1_v5_gn_6_87440 Lactuca sativa
Manes.01G060875 Manihot esculenta
Manes.01G061900 Manihot esculenta
Manes.02G022000 Manihot esculenta
Manes.02G022300 Manihot esculenta
Mapoly0111s0032 Marchantia polymorpha
MBI17_g28349_MAGBIO Magnolia biondii
MBI18_g25520_MAGBIO Magnolia biondii
MBI18_g46887_MAGBIO Magnolia biondii
MD06G1082900 Malus domestica
MD06G1083000 Malus domestica
MD07G1059700 Malus domestica
MD14G1104300 Malus domestica
MD14G1104600 Malus domestica
MD14G1104700 Malus domestica
Medtr5g010160 Medicago truncatula
Medtr5g010190 Medicago truncatula
Medtr6g464540 Medicago truncatula
Medtr8g098260 Medicago truncatula
Medtr8g098290 Medicago truncatula
MELO3C005675.2 Cucumis melo
MELO3C005676.2 Cucumis melo
Migut.A00764 Erythranthe guttata
Migut.A00766 Erythranthe guttata
Migut.E01091 Erythranthe guttata
MSTRG.13843 Avicennia marina
MSTRG.25606 Avicennia marina
MSTRG.25607 Avicennia marina
Nitab4.5_0001315g0080 Nicotiana tabacum
Nitab4.5_0001615g0180 Nicotiana tabacum
Nitab4.5_0001615g0190 Nicotiana tabacum
Nitab4.5_0010968g0010 Nicotiana tabacum
Nitab4.5_0010968g0020 Nicotiana tabacum
Nitab4.5_0023620g0010 Nicotiana tabacum
Nn1g01513 Nelumbo nucifera
Nn6g33445 Nelumbo nucifera
Nn6g33451 Nelumbo nucifera
Oeu019188.1 Olea europaea
Oeu019190.1 Olea europaea
Oeu062964.1 Olea europaea
Oeu064088.2 Olea europaea
Os01g0527400 Oryza sativa ssp. japonica
Os03g0105800 Oryza sativa ssp. japonica
Os10g0550750 Oryza sativa ssp. japonica
Peaxi162Scf00119g00829 Petunia axillaris
Peaxi162Scf00119g00830 Petunia axillaris
PGR042G1921 Punica granatum
PGR042G2965 Punica granatum
PGSC0003DMG400012340 Solanum tuberosum
PGSC0003DMG400012341 Solanum tuberosum
Phvul.002G157800 Phaseolus vulgaris
Phvul.002G157900 Phaseolus vulgaris
Phvul.002G158000 Phaseolus vulgaris
Phvul.002G289400 Phaseolus vulgaris
Phvul.002G289500 Phaseolus vulgaris
Potri.001G104200 Populus trichocarpa
Potri.001G104300 Populus trichocarpa
Potri.003G127300 Populus trichocarpa
Potri.003G127400 Populus trichocarpa
Potri.003G127500 Populus trichocarpa
Pp3c14_3750 Physcomitrium patens
Pp3c1_20810 Physcomitrium patens
Prupe.5G100000 Prunus persica
Prupe.5G100100 Prunus persica
Psat2g182400 Pisum sativum
Psat7g033200 Pisum sativum
Psat7g033240 Pisum sativum
Psat7g033280 Pisum sativum
PSO063G1482 Papaver somniferum
PSO170G6703 Papaver somniferum
PSO210G1085 Papaver somniferum
PSO675G1241 Papaver somniferum
PSO675G2714 Papaver somniferum
PSO724G0222 Papaver somniferum
PSO729G0025 Papaver somniferum
PSO732G0359 Papaver somniferum
PSO782G4970 Papaver somniferum
QL12p033043 Quercus lobata
QL12p033052 Quercus lobata
RcHm_v2.0_Chr7g0197711 Rosa chinensis
RcHm_v2.0_Chr7g0197721 Rosa chinensis
Rhsim02G0231100 Rhododendron simsii
Rhsim07G0090900 Rhododendron simsii
Sabra01G0078600 Salix brachista
Sabra01G0078700 Salix brachista
Sabra01G0078800 Salix brachista
Sabra03G0090200 Salix brachista
Sabra03G0090400 Salix brachista
Sabra03G0090500 Salix brachista
SalBow1G7405 Salvia bowleyana
SalBow1G7558 Salvia bowleyana
Sc01g0009560 Simmondsia chinensis
Sc22g0005600 Simmondsia chinensis
Sed0010190 Sechium edule
Sed0012105 Sechium edule
Sed0014228 Sechium edule
Sed0021720 Sechium edule
SEGI_02304 Sequoiadendron giganteum
SEGI_03884 Sequoiadendron giganteum
SEGI_08344 Sequoiadendron giganteum
SEGI_09158 Sequoiadendron giganteum
SEGI_18030 Sequoiadendron giganteum
SEGI_22710 Sequoiadendron giganteum
SEGI_31841 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39188 Striga asiatica
SGA_v2.0_scaffold173G39192 Striga asiatica
SGA_v2.0_scaffold242G44254 Striga asiatica
SGA_v2.0_scaffold242G44255 Striga asiatica
SGA_v2.0_scaffold42G16088 Striga asiatica
SGA_v2.0_scaffold479G52243 Striga asiatica
SGA_v2.0_scaffold479G52245 Striga asiatica
SGA_v2.0_scaffold6G03380 Striga asiatica
SGA_v2.0_scaffold6G03381 Striga asiatica
SGA_v2.0_scaffold96G28935 Striga asiatica
SGA_v2.0_scaffold96G28937 Striga asiatica
SHI07143 Sapria himalayana
SMO353G0270 Selaginella moellendorffii
SMO364G0341 Selaginella moellendorffii
Solyc08g081050.4 Solanum lycopersicum
Solyc08g081060.3 Solanum lycopersicum
Sopen08g029370 Solanum pennellii
Sopen08g029380 Solanum pennellii
Sp2g01100 Schrenkiella parvula
Sp4g08640 Schrenkiella parvula
Sp6g05920 Schrenkiella parvula
Sp6g05990 Schrenkiella parvula
Sp7g21180 Schrenkiella parvula
TAR375G0068 Trochodendron aralioides
TAR375G0676 Trochodendron aralioides
TAR375G1148 Trochodendron aralioides
TAR629G1989 Trochodendron aralioides
TAR629G2340 Trochodendron aralioides
THA.LOC104806408 Tarenaya hassleriana
THA.LOC104806997 Tarenaya hassleriana
THA.LOC104811333 Tarenaya hassleriana
THA.LOC104813019 Tarenaya hassleriana
THA.LOC104814493 Tarenaya hassleriana
THA.LOC104814560 Tarenaya hassleriana
THA.LOC104818007 Tarenaya hassleriana
Thecc.03G278600 Theobroma cacao
Thecc.03G278700 Theobroma cacao
Thhalv10023379m.g Eutrema salsugineum
Thhalv10027137m.g Eutrema salsugineum
Thhalv10027372m.g Eutrema salsugineum
Thhalv10028472m.g Eutrema salsugineum
Thhalv10028529m.g Eutrema salsugineum
TPR.G12785 Trifolium pratense
TPR.G12834 Trifolium pratense
TPR.G12968 Trifolium pratense
TPR.G16303 Trifolium pratense
TPR.G6654 Trifolium pratense
TPR.G6717 Trifolium pratense
TWI60G0571 Tripterygium wilfordii
TWI60G1236 Tripterygium wilfordii
TWI81G0062 Tripterygium wilfordii
unitig_0.g2859 Utricularia gibba
unitig_88.g27614 Utricularia gibba
unitig_88.g27615 Utricularia gibba
unitig_88.g27616 Utricularia gibba
vmacro11332 Vaccinium macrocarpon
vmacro11333 Vaccinium macrocarpon
vmacro13957 Vaccinium macrocarpon
VMungo0251G2117 Vigna mungo
VMungo0251G3461 Vigna mungo
VMungo1215G0294 Vigna mungo
VMungo1215G0918 Vigna mungo
VMungo1215G2558 Vigna mungo
VMungo1215G3352 Vigna mungo
Zm00001eb000500 Zea mays
Zm00001eb022970 Zea mays
Zm00001eb341940 Zea mays

User provided reference genes

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