Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37500 Brassica napus
A03p31150 Brassica napus
A05p32850 Brassica napus
A07p06620 Brassica napus
A08p37580 Brassica napus
A09p01700 Brassica napus
A09p68540 Brassica napus
A10p01450 Brassica napus
Aa31LG10G6150 Aethionema arabicum
Aa31LG1G9830 Aethionema arabicum
Aa31LG5G1900 Aethionema arabicum
Aa31LG8G3850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2799 Anthoceros agrestis
Actinidia13382 Actinidia chinensis
Actinidia13383 Actinidia chinensis
Actinidia14033 Actinidia chinensis
Actinidia14274 Actinidia chinensis
Actinidia21433 Actinidia chinensis
Actinidia33270 Actinidia chinensis
Ah.08g213540 Amaranthus hybridus
Ah.15g093090 Amaranthus hybridus
AL1G12150 Arabidopsis lyrata
AL3G29700 Arabidopsis lyrata
AL6G50900 Arabidopsis lyrata
Aqoxy293s001 Aquilegia oxysepala
Aqoxy2G02887 Aquilegia oxysepala
Aqoxy5G00796 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4UA9LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.539BUB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5RDD1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W45FCN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4X3AZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z42RJD Arachis hypogaea
AT1G02780 Arabidopsis thaliana
AT3G16780 Arabidopsis thaliana
AT4G02230 Arabidopsis thaliana
AT4G16030 Arabidopsis thaliana
ATR1102G033 Amborella trichopoda
Atru.chr11.2674 Acer truncatum
Atru.chr4.2917 Acer truncatum
Atru.chr5.1088 Acer truncatum
AUR62000727 Chenopodium quinoa
AUR62005237 Chenopodium quinoa
AUR62008373 Chenopodium quinoa
AUR62008713 Chenopodium quinoa
AUR62022335 Chenopodium quinoa
AUR62025522 Chenopodium quinoa
AUR62036834 Chenopodium quinoa
AUR62041551 Chenopodium quinoa
AUR62043485 Chenopodium quinoa
AUR62044321 Chenopodium quinoa
BcaB01g02063 Brassica carinata
BcaB01g02438 Brassica carinata
BcaB03g13503 Brassica carinata
BcaB06g25773 Brassica carinata
BcaC01g06768 Brassica carinata
BcaC04g24049 Brassica carinata
BcaC05g28853 Brassica carinata
BcaC07g36995 Brassica carinata
BcaC07g42303 Brassica carinata
BcaC07g42406 Brassica carinata
BcaNung06746 Brassica carinata
BolC1t04722H Brassica oleracea
BolC3t16083H Brassica oleracea
BolC5t28924H Brassica oleracea
BolC5t33710H Brassica oleracea
BolC8t46823H Brassica oleracea
BolC8t52830H Brassica oleracea
BolC9t53112H Brassica oleracea
BraA01t03810Z Brassica rapa
BraA03t12292Z Brassica rapa
BraA05t22107Z Brassica rapa
BraA09t35825Z Brassica rapa
BraA09t42197Z Brassica rapa
BraA10t42421Z Brassica rapa
C01p47530 Brassica napus
C02p38800 Brassica napus
C03p37960 Brassica napus
C03p89090 Brassica napus
C05p01420 Brassica napus
C05p49560 Brassica napus
C08p00210 Brassica napus
C08p53150 Brassica napus
C09p01770 Brassica napus
CAN.G1005.5 Capsicum annuum
CAN.G124.7 Capsicum annuum
CAN.G1280.12 Capsicum annuum
CAN.G18.3 Capsicum annuum
CAN.G291.7 Capsicum annuum
CAN.G38.13 Capsicum annuum
CAN.G524.18 Capsicum annuum
CAN.G599.1 Capsicum annuum
CAN.G602.10 Capsicum annuum
CAN.G786.33 Capsicum annuum
CAN.G862.62 Capsicum annuum
CANSAT01G2175 Cannabis sativa
CANSAT78G0299 Cannabis sativa
CARHR002060 Cardamine hirsuta
CARHR092030 Cardamine hirsuta
CARHR250450 Cardamine hirsuta
Carub.0001s0187 Capsella rubella
Carub.0003s1649 Capsella rubella
Carub.0006s3493 Capsella rubella
Carub.0007s2558 Capsella rubella
Ca_04044_v3 Cicer arietinum L.
Ca_04051_v3 Cicer arietinum L.
Ca_09192_v3 Cicer arietinum L.
Ca_10315_v3 Cicer arietinum L.
CBR_g36631 Chara braunii
Cc00_g09290 Coffea canephora
Cc00_g09300 Coffea canephora
Cc01_g04460 Coffea canephora
Cc01_g21100 Coffea canephora
Cc02_g34490 Coffea canephora
Cc03_g11560 Coffea canephora
Cc04_g06180 Coffea canephora
CDE02G0806 Ceratophyllum demersum
CDE02G3688 Ceratophyllum demersum
CDE08G0986 Ceratophyllum demersum
CDE09G0473 Ceratophyllum demersum
Cfa015436 Carpinus fangiana
Cfa019648 Carpinus fangiana
Ciclev10005909m.g Citrus clementina
Ciclev10006422m.g Citrus clementina
Ciclev10022255m.g Citrus clementina
CiPaw.07G112300 Carya illinoinensis
CiPaw.08G092900 Carya illinoinensis
CiPaw.15G144000 Carya illinoinensis
ClCG06G014250 Citrullus lanatus
ClCG09G005680 Citrullus lanatus
ClCG10G011130 Citrullus lanatus
Cpa.g.sc151.31 Carica papaya
Cpa.g.sc50.150 Carica papaya
Cre02.g075700 Chlamydomonas reinhardtii
CsaV3_1G004430 Cucumis sativus L.
CsaV3_4G001000 Cucumis sativus L.
CsaV3_7G029400 Cucumis sativus L.
CSS0001853 Camellia sinensis var. sinensis
CSS0006804 Camellia sinensis var. sinensis
CSS0031202 Camellia sinensis var. sinensis
CSS0041000 Camellia sinensis var. sinensis
CSS0043071 Camellia sinensis var. sinensis
DCAR_002861 Daucus carota
DCAR_005783 Daucus carota
DCAR_012375 Daucus carota
DCAR_018315 Daucus carota
Dinv10041 Davidia involucrata
Dinv29714 Davidia involucrata
Dinv33078 Davidia involucrata
Dinv44342 Davidia involucrata
Duzib052G0296 Durio zibethinus
Duzib068G0429 Durio zibethinus
Duzib133G0698 Durio zibethinus
Duzib138G1271 Durio zibethinus
Duzib151G0167 Durio zibethinus
Duzib211G0669 Durio zibethinus
Duzib212G1024 Durio zibethinus
ECA236G4041 Erigeron canadensis
ECA247G2132 Erigeron canadensis
ECA248G2990 Erigeron canadensis
EL10Ac3g07181 Beta vulgaris
EL10Ac4g09882 Beta vulgaris
EL10Ac7g17575 Beta vulgaris
Eucgr.H01084 Eucalyptus grandis
Eucgr.K03512 Eucalyptus grandis
FAN07G1719 Fragaria x ananassa
FAN12G0729 Fragaria x ananassa
FAN12G0916 Fragaria x ananassa
FAN15G1636 Fragaria x ananassa
FAN17G0611 Fragaria x ananassa
FAN20G2408 Fragaria x ananassa
FAN24G1562 Fragaria x ananassa
FAN27G3494 Fragaria x ananassa
FvH4_2g20910 Fragaria vesca
FvH4_2g20911 Fragaria vesca
FvH4_2g26110 Fragaria vesca
FvH4_4g18800 Fragaria vesca
Glyma.01G140102 Glycine max
Glyma.02G015900 Glycine max
Glyma.02G016000 Glycine max
Glyma.03G211000 Glycine max
Glyma.03G216600 Glycine max
Glyma.10G016300 Glycine max
Glyma.10G016400 Glycine max
Glyma.19G208200 Glycine max
Glyma.19G213200 Glycine max
Gohir.A02G051200 Gossypium hirsutum
Gohir.A03G092800 Gossypium hirsutum
Gohir.A09G236400 Gossypium hirsutum
Gohir.A10G167200 Gossypium hirsutum
Gohir.A11G113000 Gossypium hirsutum
Gohir.A12G128500 Gossypium hirsutum
Gohir.D02G056100 Gossypium hirsutum
Gohir.D02G121700 Gossypium hirsutum
Gohir.D09G237200 Gossypium hirsutum
Gohir.D10G173300 Gossypium hirsutum
Gohir.D11G118000 Gossypium hirsutum
Gohir.D12G132100 Gossypium hirsutum
Gorai.005G062000 Gossypium raimondii
Gorai.005G132400 Gossypium raimondii
Gorai.006G260200 Gossypium raimondii
Gorai.007G126400 Gossypium raimondii
Gorai.008G143200 Gossypium raimondii
Gorai.011G193800 Gossypium raimondii
GSVIVG01008460001 Vitis vinifera
GSVIVG01028052001 Vitis vinifera
GSVIVG01035096001 Vitis vinifera
HanXRQChr01g0000951 Helianthus annuus
HanXRQChr04g0105441 Helianthus annuus
HanXRQChr04g0114731 Helianthus annuus
HanXRQChr10g0285551 Helianthus annuus
HanXRQChr15g0464291 Helianthus annuus
Haze_01148 Corylus avellana
Haze_04980 Corylus avellana
Haze_18875 Corylus avellana
Haze_26544 Corylus avellana
Hma1.2p1_0163F.1_g073060 Hydrangea macrophylla
Hma1.2p1_0212F.1_g090270 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165470 Hydrangea macrophylla
Hma1.2p1_1352F.1_g277510 Hydrangea macrophylla
Hma1.2p1_2410F.1_g321540 Hydrangea macrophylla
HPP92_003118 Vanilla planifolia
HPP92_003438 Vanilla planifolia
HPP92_011509 Vanilla planifolia
Hund05451 Selenicereus undatus
Hund07114 Selenicereus undatus
Hund18213 Selenicereus undatus
Lalb_Chr04g0259861 Lupinus albus
Lalb_Chr06g0166571 Lupinus albus
Lalb_Chr06g0166581 Lupinus albus
Lalb_Chr14g0375391 Lupinus albus
Lalb_Chr15g0078371 Lupinus albus
Lalb_Chr18g0046861 Lupinus albus
Lalb_Chr21g0309331 Lupinus albus
Lj1A22T92 Lonicera japonica
Lj1g0011800 Lotus japonicus
Lj1g0024495 Lotus japonicus
Lj2C1199T7 Lonicera japonica
Lj5A676T10 Lonicera japonica
Lj5C159T5 Lonicera japonica
Lj5g0009701 Lotus japonicus
Lsat_1_v5_gn_5_190381 Lactuca sativa
Lsat_1_v5_gn_8_164781 Lactuca sativa
Lsat_1_v5_gn_9_320 Lactuca sativa
Manes.01G222800 Manihot esculenta
Manes.03G199500 Manihot esculenta
Manes.05G000100 Manihot esculenta
Manes.06G005300 Manihot esculenta
Manes.15G009700 Manihot esculenta
Mapoly0068s0058 Marchantia polymorpha
MBI12_g17289_MAGBIO Magnolia biondii
MBI19_g08242_MAGBIO Magnolia biondii
MCO01G650 Micromonas commoda
MD03G1045000 Malus domestica
MD03G1292100 Malus domestica
MD11G1306300 Malus domestica
MD13G1162700 Malus domestica
MD16G1134200 Malus domestica
MD16G1162500 Malus domestica
Medtr1g087910 Medicago truncatula
Medtr7g108955 Medicago truncatula
MELO3C015988.2 Cucumis melo
MELO3C017364.2 Cucumis melo
MELO3C017939.2 Cucumis melo
Migut.D00128 Erythranthe guttata
Migut.D01321 Erythranthe guttata
Migut.F00278 Erythranthe guttata
Migut.G00086 Erythranthe guttata
Migut.G00123 Erythranthe guttata
MSTRG.12610 Avicennia marina
MSTRG.17396 Avicennia marina
MSTRG.18134 Avicennia marina
MSTRG.21653 Avicennia marina
Nitab4.5_0000078g0400 Nicotiana tabacum
Nitab4.5_0000116g0310 Nicotiana tabacum
Nitab4.5_0000803g0040 Nicotiana tabacum
Nitab4.5_0001544g0050 Nicotiana tabacum
Nitab4.5_0004367g0100 Nicotiana tabacum
Nitab4.5_0005587g0020 Nicotiana tabacum
Nitab4.5_0008850g0010 Nicotiana tabacum
Nn2g11383 Nelumbo nucifera
Nn2g13618 Nelumbo nucifera
Nn3g21566 Nelumbo nucifera
Nn4g24263 Nelumbo nucifera
Nn4g25733 Nelumbo nucifera
Oeu008341.1 Olea europaea
Oeu015976.2 Olea europaea
Oeu017667.4 Olea europaea
Oeu026272.1 Olea europaea
Oeu048318.2 Olea europaea
Oeu054111.1 Olea europaea
Os03g0337800 Oryza sativa ssp. japonica
Os03g0579300 Oryza sativa ssp. japonica
Os07g0670800 Oryza sativa ssp. japonica
Peaxi162Scf00001g03425 Petunia axillaris
Peaxi162Scf00140g01337 Petunia axillaris
Peaxi162Scf00147g00615 Petunia axillaris
PGR003G0007 Punica granatum
PGR044G1579 Punica granatum
PGR044G2148 Punica granatum
PGR119G1511 Punica granatum
PGSC0003DMG400017933 Solanum tuberosum
PGSC0003DMG400031796 Solanum tuberosum
Phvul.001G204100 Phaseolus vulgaris
Phvul.001G204300 Phaseolus vulgaris
Phvul.001G210100 Phaseolus vulgaris
Potri.004G078000 Populus trichocarpa
Potri.012G037500 Populus trichocarpa
Potri.015G029500 Populus trichocarpa
Potri.015G037100 Populus trichocarpa
Potri.017G140800 Populus trichocarpa
Pp3c15_5130 Physcomitrium patens
Pp3c15_5140 Physcomitrium patens
Pp3c16_410 Physcomitrium patens
Pp3c18_14440 Physcomitrium patens
Pp3c21_11230 Physcomitrium patens
Pp3c22_9980 Physcomitrium patens
Pp3c25_8800 Physcomitrium patens
Pp3c9_14720 Physcomitrium patens
PRCOL_00004962 Prasinoderma coloniale
Prupe.1G130100 Prunus persica
Prupe.8G265100 Prunus persica
Psat0s929g0040 Pisum sativum
Psat3g021400 Pisum sativum
Psat6g163720 Pisum sativum
Psat6g163760 Pisum sativum
PSO170G6774 Papaver somniferum
PSO210G4878 Papaver somniferum
PSO407G0184 Papaver somniferum
QL06p010826 Quercus lobata
QL12p027768 Quercus lobata
RcHm_v2.0_Chr4g0423611 Rosa chinensis
RcHm_v2.0_Chr6g0294481 Rosa chinensis
Rhsim01G0287600 Rhododendron simsii
Rhsim13G0008300 Rhododendron simsii
Sabra04G0051700 Salix brachista
Sabra12G0026000 Salix brachista
Sabra13G0104600 Salix brachista
Sabra13G0104900 Salix brachista
Sabra15G0024700 Salix brachista
Sabra15G0032300 Salix brachista
Sabra15G0033800 Salix brachista
Sabra15G0036300 Salix brachista
Sabra15G0058600 Salix brachista
Sabra15G0058700 Salix brachista
Sabra15G0059300 Salix brachista
Sabra15G0061900 Salix brachista
Sabra17G0118300 Salix brachista
SalBow2G0896 Salvia bowleyana
SalBow2G2856 Salvia bowleyana
SalBow6G4446 Salvia bowleyana
SalBow7G0179 Salvia bowleyana
Sc05g0003550 Simmondsia chinensis
Sc05g0003580 Simmondsia chinensis
Sc16g0008710 Simmondsia chinensis
Sed0002569 Sechium edule
Sed0015773 Sechium edule
Sed0021542 Sechium edule
Sed0027352 Sechium edule
Sed0027837 Sechium edule
SGA_v2.0_scaffold104G30103 Striga asiatica
SGA_v2.0_scaffold198G41131 Striga asiatica
SGA_v2.0_scaffold36G14329 Striga asiatica
SMO228G0170 Selaginella moellendorffii
SMO232G0018 Selaginella moellendorffii
Solyc06g009210.4 Solanum lycopersicum
Solyc09g031760.1 Solanum lycopersicum
Solyc09g075430.3 Solanum lycopersicum
Sopen06g003980 Solanum pennellii
Sopen09g014700 Solanum pennellii
Sopen09g030210 Solanum pennellii
Sp1g01740 Schrenkiella parvula
Sp3g15030 Schrenkiella parvula
Sp6g02130 Schrenkiella parvula
Sp7g14510 Schrenkiella parvula
TAR365G0789 Trochodendron aralioides
TAR369G0348 Trochodendron aralioides
TAR623G0892 Trochodendron aralioides
TAR623G0894 Trochodendron aralioides
TAR633G0500 Trochodendron aralioides
TAR636G0483 Trochodendron aralioides
TAR636G1727 Trochodendron aralioides
TAR636G3001 Trochodendron aralioides
TAR636G3014 Trochodendron aralioides
THA.LOC104802183 Tarenaya hassleriana
THA.LOC104802589 Tarenaya hassleriana
THA.LOC104804722 Tarenaya hassleriana
THA.LOC104817478 Tarenaya hassleriana
THA.LOC104820284 Tarenaya hassleriana
THA.LOC104820710 Tarenaya hassleriana
THA.LOC104821783 Tarenaya hassleriana
THA.LOC104825957 Tarenaya hassleriana
THA.LOC104827663 Tarenaya hassleriana
THA.LOC104827674 Tarenaya hassleriana
THA.LOC104827675 Tarenaya hassleriana
Thecc.01G306000 Theobroma cacao
Thecc.03G055100 Theobroma cacao
Thecc.04G290400 Theobroma cacao
Thhalv10008661m.g Eutrema salsugineum
Thhalv10021535m.g Eutrema salsugineum
Thhalv10026243m.g Eutrema salsugineum
Thhalv10028960m.g Eutrema salsugineum
TPR.G32563 Trifolium pratense
TPR.G33981 Trifolium pratense
TPR.G9602 Trifolium pratense
TWI09G0028 Tripterygium wilfordii
TWI15G0355 Tripterygium wilfordii
TWI23G0376 Tripterygium wilfordii
TWI53G1130 Tripterygium wilfordii
TWI59G0752 Tripterygium wilfordii
TWI73G0892 Tripterygium wilfordii
unitig_26.g10178 Utricularia gibba
unitig_749.g13750 Utricularia gibba
unitig_749.g13751 Utricularia gibba
vmacro08106 Vaccinium macrocarpon
vmacro15136 Vaccinium macrocarpon
vmacro23240 Vaccinium macrocarpon
VMungo1383G3208 Vigna mungo
VMungo1383G3449 Vigna mungo
VMungo1383G3662 Vigna mungo
Zm00001eb160340 Zea mays
Zm00001eb207850 Zea mays
Zm00001eb232520 Zea mays
Zm00001eb374300 Zea mays

User provided reference genes

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