Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39640 Brassica napus
A02p01350 Brassica napus
A05p35430 Brassica napus
A06p00470 Brassica napus
A08p01130 Brassica napus
A10p25720 Brassica napus
Aa31LG10G1240 Aethionema arabicum
Aa31LG3G15180 Aethionema arabicum
Aa31LG4G13280 Aethionema arabicum
Aa31LG8G1180 Aethionema arabicum
Actinidia03307 Actinidia chinensis
Actinidia21787 Actinidia chinensis
Actinidia25699 Actinidia chinensis
Actinidia27576 Actinidia chinensis
Actinidia32178 Actinidia chinensis
Actinidia39685 Actinidia chinensis
Ah.08g216680 Amaranthus hybridus
Ah.10g033990 Amaranthus hybridus
AL1G62910 Arabidopsis lyrata
AL3G26180 Arabidopsis lyrata
AL5G21160 Arabidopsis lyrata
AL6G22840 Arabidopsis lyrata
Aqoxy1G01010 Aquilegia oxysepala
Aqoxy4G01396 Aquilegia oxysepala
Aqoxy7G01095 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1030I5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5N5SZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62UK56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A8XJ49 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3VH7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HX0TR5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S358VU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVA0C2 Arachis hypogaea
AT1G54200 Arabidopsis thaliana
AT3G13980 Arabidopsis thaliana
AT3G42800 Arabidopsis thaliana
AT5G12050 Arabidopsis thaliana
ATR0598G179 Amborella trichopoda
Atru.chr1.3909 Acer truncatum
Atru.chr7.1663 Acer truncatum
Atru.chr7.1866 Acer truncatum
AUR62001497 Chenopodium quinoa
AUR62009095 Chenopodium quinoa
AUR62009873 Chenopodium quinoa
AUR62020576 Chenopodium quinoa
AUR62028996 Chenopodium quinoa
BcaB01g05432 Brassica carinata
BcaB04g17017 Brassica carinata
BcaB04g20965 Brassica carinata
BcaB06g25413 Brassica carinata
BcaB07g33247 Brassica carinata
BcaC01g01441 Brassica carinata
BcaC03g13409 Brassica carinata
BcaC05g29134 Brassica carinata
BcaC08g43599 Brassica carinata
BcaC09g48386 Brassica carinata
BcaNung02630 Brassica carinata
BolC1t05011H Brassica oleracea
BolC2t06503H Brassica oleracea
BolC3t13127H Brassica oleracea
BolC3t21524H Brassica oleracea
BolC5t34042H Brassica oleracea
BolC6t36070H Brassica oleracea
BolC9t59310H Brassica oleracea
BraA01t04005Z Brassica rapa
BraA02t05114Z Brassica rapa
BraA03t09876Z Brassica rapa
BraA05t22353Z Brassica rapa
BraA06t23261Z Brassica rapa
BraA08t32167Z Brassica rapa
BraA10t44637Z Brassica rapa
C01p50620 Brassica napus
C02p05590 Brassica napus
C03p06200 Brassica napus
C03p92070 Brassica napus
C05p53720 Brassica napus
C06p09970 Brassica napus
C09p64790 Brassica napus
CAN.G1387.3 Capsicum annuum
CAN.G1387.5 Capsicum annuum
CANSAT25G3298 Cannabis sativa
CANSAT56G0195 Cannabis sativa
CANSAT56G4431 Cannabis sativa
CARHR044570 Cardamine hirsuta
CARHR088800 Cardamine hirsuta
CARHR153760 Cardamine hirsuta
CARHR201080 Cardamine hirsuta
Carub.0001s4343 Capsella rubella
Carub.0003s1356 Capsella rubella
Carub.0005s0885 Capsella rubella
Carub.0006s1057 Capsella rubella
Ca_13105_v3 Cicer arietinum L.
Ca_15839_v3 Cicer arietinum L.
Cc04_g01440 Coffea canephora
Cc06_g11890 Coffea canephora
Cc08_g01330 Coffea canephora
CDE05G0831 Ceratophyllum demersum
CDE05G3396 Ceratophyllum demersum
CDE10G0469 Ceratophyllum demersum
CDE11G0090 Ceratophyllum demersum
Cfa003031 Carpinus fangiana
Cfa003543 Carpinus fangiana
Cfa011880 Carpinus fangiana
Cfa018007 Carpinus fangiana
Ciclev10008257m.g Citrus clementina
Ciclev10008758m.g Citrus clementina
Ciclev10025682m.g Citrus clementina
CiPaw.01G220600 Carya illinoinensis
CiPaw.02G136700 Carya illinoinensis
CiPaw.03G210100 Carya illinoinensis
CiPaw.04G146700 Carya illinoinensis
CiPaw.10G053700 Carya illinoinensis
CiPaw.15G090100 Carya illinoinensis
ClCG05G015630 Citrullus lanatus
ClCG07G013990 Citrullus lanatus
ClCG08G009900 Citrullus lanatus
ClCG09G000910 Citrullus lanatus
COL.COLO4_18134 Corchorus olitorius
COL.COLO4_21120 Corchorus olitorius
COL.COLO4_30774 Corchorus olitorius
Cpa.g.sc126.40 Carica papaya
Cpa.g.sc25.102 Carica papaya
Cpa.g.sc28.87 Carica papaya
CsaV3_3G043550 Cucumis sativus L.
CsaV3_4G035960 Cucumis sativus L.
CsaV3_6G032000 Cucumis sativus L.
CsaV3_7G034550 Cucumis sativus L.
CSS0004414 Camellia sinensis var. sinensis
CSS0039321 Camellia sinensis var. sinensis
DCAR_007642 Daucus carota
DCAR_022698 Daucus carota
DCAR_026410 Daucus carota
DCAR_028288 Daucus carota
Dinv04028 Davidia involucrata
Dinv04257 Davidia involucrata
Dinv10389 Davidia involucrata
Dinv25581 Davidia involucrata
Dinv37875 Davidia involucrata
Dinv41833 Davidia involucrata
Dinv42369 Davidia involucrata
Dinv44677 Davidia involucrata
Duzib150G0073 Durio zibethinus
Duzib150G1066 Durio zibethinus
Duzib160G0588 Durio zibethinus
Duzib168G0244 Durio zibethinus
Duzib168G1997 Durio zibethinus
Duzib187G1785 Durio zibethinus
Duzib187G1885 Durio zibethinus
Duzib192G0094 Durio zibethinus
Duzib235G0516 Durio zibethinus
ECA236G0014 Erigeron canadensis
ECA240G4202 Erigeron canadensis
ECA247G0079 Erigeron canadensis
EL10Ac2g03800 Beta vulgaris
EL10Ac7g16397 Beta vulgaris
EL10Ac8g19131 Beta vulgaris
Eucgr.C00707 Eucalyptus grandis
Eucgr.C03147 Eucalyptus grandis
Eucgr.F03172 Eucalyptus grandis
Eucgr.J02829 Eucalyptus grandis
FAN02G1354 Fragaria x ananassa
FAN05G4431 Fragaria x ananassa
FAN09G3059 Fragaria x ananassa
FAN14G3952 Fragaria x ananassa
FAN15G1669 Fragaria x ananassa
FAN19G1765 Fragaria x ananassa
FAN20G1484 Fragaria x ananassa
FAN23G0146 Fragaria x ananassa
FAN24G0924 Fragaria x ananassa
FAN26G0348 Fragaria x ananassa
FAN26G2822 Fragaria x ananassa
FAN27G1098 Fragaria x ananassa
FAN28G0322 Fragaria x ananassa
FAN28G2908 Fragaria x ananassa
FvH4_1g08230 Fragaria vesca
FvH4_2g31260 Fragaria vesca
FvH4_6g34500 Fragaria vesca
Glyma.04G055100 Glycine max
Glyma.06G055200 Glycine max
Glyma.07G036700 Glycine max
Glyma.13G108300 Glycine max
Glyma.14G099400 Glycine max
Glyma.16G006100 Glycine max
Glyma.17G051100 Glycine max
Glyma.17G225300 Glycine max
Gohir.A05G039500 Gossypium hirsutum
Gohir.A05G137600 Gossypium hirsutum
Gohir.A05G406200 Gossypium hirsutum
Gohir.A06G075300 Gossypium hirsutum
Gohir.A06G083100 Gossypium hirsutum
Gohir.A07G020501 Gossypium hirsutum
Gohir.A10G052900 Gossypium hirsutum
Gohir.D04G009400 Gossypium hirsutum
Gohir.D05G041000 Gossypium hirsutum
Gohir.D05G139700 Gossypium hirsutum
Gohir.D06G074100 Gossypium hirsutum
Gohir.D06G083800 Gossypium hirsutum
Gohir.D07G020200 Gossypium hirsutum
Gohir.D10G054700 Gossypium hirsutum
Gorai.001G021000 Gossypium raimondii
Gorai.009G041500 Gossypium raimondii
Gorai.009G144000 Gossypium raimondii
Gorai.010G086600 Gossypium raimondii
Gorai.010G097300 Gossypium raimondii
Gorai.011G058200 Gossypium raimondii
Gorai.012G011300 Gossypium raimondii
GSVIVG01015116001 Vitis vinifera
GSVIVG01016780001 Vitis vinifera
HanXRQChr03g0069531 Helianthus annuus
HanXRQChr04g0094821 Helianthus annuus
HanXRQChr05g0139531 Helianthus annuus
HanXRQChr06g0182641 Helianthus annuus
HanXRQChr09g0276771 Helianthus annuus
HanXRQChr10g0312441 Helianthus annuus
HanXRQChr10g0319591 Helianthus annuus
HanXRQChr15g0497071 Helianthus annuus
HanXRQChr16g0532421 Helianthus annuus
Haze_16017 Corylus avellana
Haze_18123 Corylus avellana
Haze_25969 Corylus avellana
Hma1.2p1_0291F.1_g115200 Hydrangea macrophylla
Hma1.2p1_0732F.1_g209990 Hydrangea macrophylla
Hma1.2p1_0797F.1_g219410 Hydrangea macrophylla
HPP92_004377 Vanilla planifolia
HPP92_007989 Vanilla planifolia
HPP92_023459 Vanilla planifolia
HPP92_023473 Vanilla planifolia
Lalb_Chr04g0263371 Lupinus albus
Lalb_Chr07g0181051 Lupinus albus
Lalb_Chr08g0244861 Lupinus albus
Lalb_Chr11g0074331 Lupinus albus
Lalb_Chr13g0299551 Lupinus albus
Lalb_Chr14g0375531 Lupinus albus
Lalb_Chr24g0393631 Lupinus albus
Lalb_Chr25g0281171 Lupinus albus
Lj1g0010668 Lotus japonicus
Lj3g0028193 Lotus japonicus
Lj5C38T14 Lonicera japonica
Lj5g0009631 Lotus japonicus
Lj6g0003493 Lotus japonicus
Lj7C233T2 Lonicera japonica
Lj8C508T0 Lonicera japonica
Lj8C510T4 Lonicera japonica
Lj9P522T34 Lonicera japonica
Lsat_1_v5_gn_1_37441 Lactuca sativa
Lsat_1_v5_gn_4_93600 Lactuca sativa
Lsat_1_v5_gn_5_135800 Lactuca sativa
Lsat_1_v5_gn_5_141901 Lactuca sativa
Lsat_1_v5_gn_7_60060 Lactuca sativa
Lsat_1_v5_gn_8_99360 Lactuca sativa
Manes.03G038000 Manihot esculenta
Manes.03G052400 Manihot esculenta
Manes.04G143200 Manihot esculenta
Manes.11G021800 Manihot esculenta
Manes.16G084100 Manihot esculenta
Manes.16G097700 Manihot esculenta
MBI13_g11365_MAGBIO Magnolia biondii
MBI19_g35474_MAGBIO Magnolia biondii
MD02G1086600 Malus domestica
MD08G1069700 Malus domestica
MD09G1185600 Malus domestica
MD15G1052300 Malus domestica
MD15G1213800 Malus domestica
MD17G1170300 Malus domestica
Medtr1g015275 Medicago truncatula
Medtr3g104880 Medicago truncatula
Medtr4g125620 Medicago truncatula
Medtr8g019660 Medicago truncatula
MELO3C011481.2 Cucumis melo
MELO3C016903.2 Cucumis melo
MELO3C024362.2 Cucumis melo
MELO3C025811.2 Cucumis melo
Migut.A00091 Erythranthe guttata
Migut.E01574 Erythranthe guttata
Migut.I01063 Erythranthe guttata
Migut.J00952 Erythranthe guttata
Migut.L01544 Erythranthe guttata
MSTRG.10960 Avicennia marina
MSTRG.11640 Avicennia marina
MSTRG.14063 Avicennia marina
Nitab4.5_0000073g0010 Nicotiana tabacum
Nitab4.5_0001866g0020 Nicotiana tabacum
Nitab4.5_0002072g0060 Nicotiana tabacum
Nitab4.5_0002842g0070 Nicotiana tabacum
Nitab4.5_0002879g0080 Nicotiana tabacum
Nitab4.5_0003670g0010 Nicotiana tabacum
Nitab4.5_0004953g0060 Nicotiana tabacum
Nitab4.5_0009588g0020 Nicotiana tabacum
Nitab4.5_0010890g0020 Nicotiana tabacum
Nn3g17646 Nelumbo nucifera
Nn6g35590 Nelumbo nucifera
Oeu002849.1 Olea europaea
Oeu003979.1 Olea europaea
Oeu007567.1 Olea europaea
Oeu010818.1 Olea europaea
Oeu022777.1 Olea europaea
Oeu027281.1 Olea europaea
Oeu027282.1 Olea europaea
Oeu029698.1 Olea europaea
Oeu049518.1 Olea europaea
Oeu051321.1 Olea europaea
Oeu058721.1 Olea europaea
Oeu063408.1 Olea europaea
Peaxi162Scf00038g01811 Petunia axillaris
Peaxi162Scf00101g00121 Petunia axillaris
Peaxi162Scf00219g00053 Petunia axillaris
Peaxi162Scf00498g00065 Petunia axillaris
Peaxi162Scf00809g00410 Petunia axillaris
PGR031G1119 Punica granatum
PGR044G1728 Punica granatum
PGR102G0969 Punica granatum
PGR119G0990 Punica granatum
PGR142G0115 Punica granatum
PGSC0003DMG400002570 Solanum tuberosum
PGSC0003DMG400011607 Solanum tuberosum
PGSC0003DMG400011608 Solanum tuberosum
PGSC0003DMG400019573 Solanum tuberosum
PGSC0003DMG400021740 Solanum tuberosum
Phvul.001G039400 Phaseolus vulgaris
Phvul.003G132800 Phaseolus vulgaris
Phvul.009G081100 Phaseolus vulgaris
Phvul.010G132500 Phaseolus vulgaris
Potri.001G170500 Populus trichocarpa
Potri.003G063400 Populus trichocarpa
Potri.006G144700 Populus trichocarpa
Potri.006G222700 Populus trichocarpa
Potri.018G049900 Populus trichocarpa
Potri.018G065000 Populus trichocarpa
Prupe.1G406300 Prunus persica
Prupe.3G043400 Prunus persica
Prupe.7G203200 Prunus persica
Psat0s89g0040 Pisum sativum
Psat0s89g0080 Pisum sativum
Psat4g017040 Pisum sativum
Psat4g183280 Pisum sativum
Psat6g022320 Pisum sativum
PSO063G4179 Papaver somniferum
PSO210G0965 Papaver somniferum
PSO210G7252 Papaver somniferum
PSO421G0310 Papaver somniferum
QL02p000252 Quercus lobata
QL02p061086 Quercus lobata
QL05p008269 Quercus lobata
RcHm_v2.0_Chr2g0094281 Rosa chinensis
RcHm_v2.0_Chr2g0144811 Rosa chinensis
RcHm_v2.0_Chr6g0311541 Rosa chinensis
Rhsim05G0012700 Rhododendron simsii
Rhsim08G0237500 Rhododendron simsii
Sabra01G0140700 Salix brachista
Sabra01G0140800 Salix brachista
Sabra03G0037000 Salix brachista
Sabra06G0113200 Salix brachista
Sabra06G0114500 Salix brachista
Sabra06G0172100 Salix brachista
Sabra18G0046900 Salix brachista
Sabra18G0057600 Salix brachista
SalBow4G1810 Salvia bowleyana
SalBow6G0975 Salvia bowleyana
SalBow6G6945 Salvia bowleyana
SalBow7G2112 Salvia bowleyana
Sc08g0008770 Simmondsia chinensis
Sc12g0010520 Simmondsia chinensis
Sc15g0000490 Simmondsia chinensis
Sc23g0004250 Simmondsia chinensis
Sed0001708 Sechium edule
Sed0006913 Sechium edule
Sed0010087 Sechium edule
Sed0012607 Sechium edule
Sed0014419 Sechium edule
Sed0017598 Sechium edule
Sed0027990 Sechium edule
SEGI_11407 Sequoiadendron giganteum
SEGI_36444 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38002 Striga asiatica
SGA_v2.0_scaffold20G09177 Striga asiatica
SGA_v2.0_scaffold21G09472 Striga asiatica
SGA_v2.0_scaffold64G21860 Striga asiatica
SGA_v2.0_scaffold71G23864 Striga asiatica
SGA_v2.0_scaffold97G29150 Striga asiatica
SHI18834 Sapria himalayana
Solyc03g121970.1 Solanum lycopersicum
Solyc07g041290.3 Solanum lycopersicum
Solyc08g062180.3 Solanum lycopersicum
Solyc12g049255.1 Solanum lycopersicum
Sopen03g040790 Solanum pennellii
Sopen07g020600 Solanum pennellii
Sopen08g017750 Solanum pennellii
Sopen12g023740 Solanum pennellii
Sp3g12230 Schrenkiella parvula
Sp6g31550 Schrenkiella parvula
SpUn0007_0150 Schrenkiella parvula
SpUn0013_0010 Schrenkiella parvula
TAR383G0478 Trochodendron aralioides
TAR624G1410 Trochodendron aralioides
TAR626G0456 Trochodendron aralioides
THA.LOC104799149 Tarenaya hassleriana
THA.LOC104803702 Tarenaya hassleriana
THA.LOC104811003 Tarenaya hassleriana
THA.LOC104815629 Tarenaya hassleriana
THA.LOC104822656 Tarenaya hassleriana
Thecc.06G118100 Theobroma cacao
Thecc.09G061200 Theobroma cacao
Thecc.09G081100 Theobroma cacao
Thhalv10012317m.g Eutrema salsugineum
Thhalv10013873m.g Eutrema salsugineum
Thhalv10022002m.g Eutrema salsugineum
TPR.G16451 Trifolium pratense
TPR.G3574 Trifolium pratense
TPR.G38875 Trifolium pratense
TPR.G9464 Trifolium pratense
TWI31G0706 Tripterygium wilfordii
TWI32G0026 Tripterygium wilfordii
TWI32G0337 Tripterygium wilfordii
TWI34G1323 Tripterygium wilfordii
TWI63G0114 Tripterygium wilfordii
TWI75G1417 Tripterygium wilfordii
unitig_32.g11566 Utricularia gibba
unitig_748.g7466 Utricularia gibba
unitig_748.g7533 Utricularia gibba
unitig_749.g14235 Utricularia gibba
vmacro15021 Vaccinium macrocarpon
vmacro17175 Vaccinium macrocarpon
VMungo0331G1191 Vigna mungo
VMungo0647G0706 Vigna mungo
VMungo1215G1300 Vigna mungo
VMungo1309G2463 Vigna mungo

User provided reference genes

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