Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10450 Brassica napus
A02p29450 Brassica napus
A03p51320 Brassica napus
A05p29010 Brassica napus
A06p05510 Brassica napus
Aa31LG6G1230 Aethionema arabicum
Aa31LG7G13510 Aethionema arabicum
Aa31LG8G6860 Aethionema arabicum
Aa31LG9G6980 Aethionema arabicum
Aa31sc55G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1378 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1203 Anthoceros agrestis
Actinidia06934 Actinidia chinensis
Actinidia07629 Actinidia chinensis
Actinidia16355 Actinidia chinensis
Ah.06g193790 Amaranthus hybridus
Ah.06g194360 Amaranthus hybridus
Ah.08g223070 Amaranthus hybridus
Ah.09g237830 Amaranthus hybridus
AL1G18950 Arabidopsis lyrata
AL1G58150 Arabidopsis lyrata
AL3G33750 Arabidopsis lyrata
AL6G53120 Arabidopsis lyrata
AL7G35800 Arabidopsis lyrata
AL8G12600 Arabidopsis lyrata
Aqoxy2G00275 Aquilegia oxysepala
Aqoxy2G00276 Aquilegia oxysepala
Aqoxy2G00279 Aquilegia oxysepala
Aqoxy4G00488 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.55WK8U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VV3Y6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F9SDQQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FM4RDW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5WY8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PC9ITH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1EAJK Arachis hypogaea
AT1G08520 Arabidopsis thaliana
AT3G20070 Arabidopsis thaliana
AT4G18480 Arabidopsis thaliana
AT5G45930 Arabidopsis thaliana
ATR0681G241 Amborella trichopoda
ATR0721G126 Amborella trichopoda
ATR0721G176 Amborella trichopoda
ATR1098G051 Amborella trichopoda
Atru.chr10.1729 Acer truncatum
Atru.chr3.2626 Acer truncatum
Atru.chr3.2630 Acer truncatum
AUR62000166 Chenopodium quinoa
AUR62000167 Chenopodium quinoa
AUR62031140 Chenopodium quinoa
AUR62036545 Chenopodium quinoa
AUR62039844 Chenopodium quinoa
AUR62039845 Chenopodium quinoa
BcaB01g01441 Brassica carinata
BcaB02g07197 Brassica carinata
BcaB06g26078 Brassica carinata
BcaB06g26464 Brassica carinata
BcaB07g34095 Brassica carinata
BcaC01g05497 Brassica carinata
BcaC02g08532 Brassica carinata
BcaC03g16800 Brassica carinata
BcaC03g18319 Brassica carinata
BcaC04g19960 Brassica carinata
BcaC05g28363 Brassica carinata
BcaC06g30582 Brassica carinata
BcaC09g51503 Brassica carinata
BcaNung02708 Brassica carinata
BcaNung05872 Brassica carinata
BolC1t01217H Brassica oleracea
BolC2t10724H Brassica oleracea
BolC4t26880H Brassica oleracea
BolC5t29422H Brassica oleracea
BolC5t33164H Brassica oleracea
BolC7t45474H Brassica oleracea
BraA01t00991Z Brassica rapa
BraA02t07972Z Brassica rapa
BraA03t14213Z Brassica rapa
BraA05t21783Z Brassica rapa
BraA06t23759Z Brassica rapa
C01p12430 Brassica napus
C02p46720 Brassica napus
C05p06620 Brassica napus
C05p44410 Brassica napus
C07p49730 Brassica napus
CAN.G168.8 Capsicum annuum
CAN.G625.44 Capsicum annuum
CAN.G676.47 Capsicum annuum
CANSAT35G0876 Cannabis sativa
CANSAT54G2333 Cannabis sativa
CANSAT54G2932 Cannabis sativa
CARHR008420 Cardamine hirsuta
CARHR095600 Cardamine hirsuta
CARHR176000 Cardamine hirsuta
CARHR225320 Cardamine hirsuta
Carub.0001s0788 Capsella rubella
Carub.0003s1999 Capsella rubella
Carub.0007s2275 Capsella rubella
Carub.0008s0199 Capsella rubella
Ca_00416_v3 Cicer arietinum L.
Ca_07826_v3 Cicer arietinum L.
Ca_24494_v3 Cicer arietinum L.
Ca_26047_v3 Cicer arietinum L.
CBR_g18769 Chara braunii
Cc01_g06000 Coffea canephora
Cc01_g06480 Coffea canephora
Cc07_g18500 Coffea canephora
CDE02G0596 Ceratophyllum demersum
CDE02G1568 Ceratophyllum demersum
CDE02G2237 Ceratophyllum demersum
CDE08G0265 Ceratophyllum demersum
Cfa000573 Carpinus fangiana
Cfa009826 Carpinus fangiana
Ciclev10006845m.g Citrus clementina
Ciclev10014361m.g Citrus clementina
Ciclev10015348m.g Citrus clementina
CiPaw.09G067200 Carya illinoinensis
CiPaw.10G056900 Carya illinoinensis
CiPaw.13G153500 Carya illinoinensis
CiPaw.13G153600 Carya illinoinensis
ClCG01G023530 Citrullus lanatus
ClCG02G023020 Citrullus lanatus
COL.COLO4_19225 Corchorus olitorius
COL.COLO4_31349 Corchorus olitorius
COL.COLO4_36106 Corchorus olitorius
COL.COLO4_36107 Corchorus olitorius
COL.COLO4_36479 Corchorus olitorius
Cpa.g.c47754 Carica papaya
Cpa.g.sc7.16 Carica papaya
Cpa.g.sc84.6 Carica papaya
Cpa.g.sc84.7 Carica papaya
Cre05.g242000 Chlamydomonas reinhardtii
Cre06.g306300 Chlamydomonas reinhardtii
Cre12.g510800 Chlamydomonas reinhardtii
CsaV3_6G039120 Cucumis sativus L.
CsaV3_6G050640 Cucumis sativus L.
CSS0001499 Camellia sinensis var. sinensis
CSS0004540 Camellia sinensis var. sinensis
CSS0020855 Camellia sinensis var. sinensis
CSS0026907 Camellia sinensis var. sinensis
CSS0048252 Camellia sinensis var. sinensis
DCAR_002089 Daucus carota
DCAR_002090 Daucus carota
DCAR_004025 Daucus carota
Dinv04637 Davidia involucrata
Dinv17393 Davidia involucrata
Dinv36207 Davidia involucrata
Dinv36208 Davidia involucrata
Dinv40648 Davidia involucrata
Duzib150G1307 Durio zibethinus
Duzib168G0657 Durio zibethinus
Duzib192G0898 Durio zibethinus
ECA233G1682 Erigeron canadensis
ECA234G2254 Erigeron canadensis
ECA234G3051 Erigeron canadensis
ECA238G0809 Erigeron canadensis
EL10Ac4g10182 Beta vulgaris
EL10Ac4g10183 Beta vulgaris
EL10Ac4g10184 Beta vulgaris
EL10Ac8g20486 Beta vulgaris
Eucgr.D00547 Eucalyptus grandis
Eucgr.D00551 Eucalyptus grandis
Eucgr.J00729 Eucalyptus grandis
Eucgr.J00732 Eucalyptus grandis
FAN11G0169 Fragaria x ananassa
FAN11G0520 Fragaria x ananassa
FAN11G3154 Fragaria x ananassa
FAN16G0520 Fragaria x ananassa
FAN16G0976 Fragaria x ananassa
FAN16G1600 Fragaria x ananassa
FAN21G0087 Fragaria x ananassa
FAN21G0933 Fragaria x ananassa
FAN25G0409 Fragaria x ananassa
FAN25G0670 Fragaria x ananassa
FAN25G1867 Fragaria x ananassa
FvH4_3g08130 Fragaria vesca
FvH4_3g28280 Fragaria vesca
FvH4_3g28310 Fragaria vesca
Glyma.01G226700 Glycine max
Glyma.07G204300 Glycine max
Glyma.09G267400 Glycine max
Glyma.10G069400 Glycine max
Glyma.11G016000 Glycine max
Glyma.13G152406 Glycine max
Glyma.13G171800 Glycine max
Glyma.13G232500 Glycine max
Glyma.15G080200 Glycine max
Glyma.18G222500 Glycine max
Gohir.A05G070400 Gossypium hirsutum
Gohir.A06G200700 Gossypium hirsutum
Gohir.A08G010700 Gossypium hirsutum
Gohir.A09G111500 Gossypium hirsutum
Gohir.A10G030400 Gossypium hirsutum
Gohir.D05G073400 Gossypium hirsutum
Gohir.D06G208200 Gossypium hirsutum
Gohir.D08G021000 Gossypium hirsutum
Gohir.D09G108100 Gossypium hirsutum
Gohir.D10G031300 Gossypium hirsutum
Gorai.004G015600 Gossypium raimondii
Gorai.006G125800 Gossypium raimondii
Gorai.009G074300 Gossypium raimondii
Gorai.010G242400 Gossypium raimondii
Gorai.011G032900 Gossypium raimondii
GSVIVG01002904001 Vitis vinifera
GSVIVG01021169001 Vitis vinifera
GSVIVG01031554001 Vitis vinifera
GSVIVG01031555001 Vitis vinifera
HanXRQChr02g0059211 Helianthus annuus
HanXRQChr04g0117031 Helianthus annuus
HanXRQChr06g0176621 Helianthus annuus
HanXRQChr11g0327161 Helianthus annuus
HanXRQChr12g0370631 Helianthus annuus
HanXRQChr14g0441711 Helianthus annuus
HanXRQChr14g0453731 Helianthus annuus
HanXRQChr17g0556041 Helianthus annuus
Haze_06277 Corylus avellana
Haze_23186 Corylus avellana
Haze_23187 Corylus avellana
Hma1.2p1_0155F.1_g068420 Hydrangea macrophylla
Hma1.2p1_1043F.1_g251230 Hydrangea macrophylla
Hma1.2p1_1043F.1_g251240 Hydrangea macrophylla
Hma1.2p1_1043F.1_g251250 Hydrangea macrophylla
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla
HPP92_003245 Vanilla planifolia
HPP92_008742 Vanilla planifolia
HPP92_015725 Vanilla planifolia
Hund21994 Selenicereus undatus
Hund21995 Selenicereus undatus
Lalb_Chr09g0320581 Lupinus albus
Lalb_Chr09g0327961 Lupinus albus
Lalb_Chr17g0336631 Lupinus albus
Lalb_Chr18g0059221 Lupinus albus
Lalb_Chr20g0108071 Lupinus albus
Lj1A1196T40 Lonicera japonica
Lj1A305G18 Lonicera japonica
Lj2A623T26 Lonicera japonica
Lj5A793G14 Lonicera japonica
Lj6g0004465 Lotus japonicus
Lj6g0020481 Lotus japonicus
LjContig00136g0008106 Lotus japonicus
LjContig00222g0003711 Lotus japonicus
Lsat_1_v5_gn_2_111701 Lactuca sativa
Lsat_1_v5_gn_2_28360 Lactuca sativa
Lsat_1_v5_gn_4_50480 Lactuca sativa
Manes.06G161200 Manihot esculenta
Manes.09G003800 Manihot esculenta
Manes.14G005700 Manihot esculenta
Manes.16G035500 Manihot esculenta
Manes.17G053100 Manihot esculenta
Mapoly0019s0119 Marchantia polymorpha
Mapoly0034s0094 Marchantia polymorpha
Mapoly0040s0099 Marchantia polymorpha
MBI06_g31399_MAGBIO Magnolia biondii
MBI13_g04765_MAGBIO Magnolia biondii
MBI13_g04766_MAGBIO Magnolia biondii
MCO01G614 Micromonas commoda
MCO03G514 Micromonas commoda
MCO04G050 Micromonas commoda
MCO06G110 Micromonas commoda
MCO16G689 Micromonas commoda
MD03G1170000 Malus domestica
MD03G1170100 Malus domestica
MD05G1304900 Malus domestica
MD10G1284000 Malus domestica
MD11G1187400 Malus domestica
MD11G1187600 Malus domestica
Medtr2g015390 Medicago truncatula
Medtr4g087895 Medicago truncatula
Medtr5g009070 Medicago truncatula
Medtr7g075050 Medicago truncatula
Medtr8g059560 Medicago truncatula
MELO3C007233.2 Cucumis melo
MELO3C014571.2 Cucumis melo
MELO3C014572.2 Cucumis melo
Migut.M01066 Erythranthe guttata
Migut.N02358 Erythranthe guttata
Migut.O00259 Erythranthe guttata
MSTRG.11555 Avicennia marina
MSTRG.16140 Avicennia marina
MSTRG.18450 Avicennia marina
MSTRG.7388 Avicennia marina
Nitab4.5_0000733g0210 Nicotiana tabacum
Nitab4.5_0000753g0110 Nicotiana tabacum
Nitab4.5_0001663g0090 Nicotiana tabacum
Nitab4.5_0003652g0030 Nicotiana tabacum
Nitab4.5_0005897g0020 Nicotiana tabacum
Nitab4.5_0006237g0030 Nicotiana tabacum
Nn2g15047 Nelumbo nucifera
Nn2g15058 Nelumbo nucifera
Nn4g22114 Nelumbo nucifera
Oeu038401.1 Olea europaea
Oeu043095.1 Olea europaea
Oeu043288.1 Olea europaea
Oeu062333.1 Olea europaea
Os03g0563300 Oryza sativa ssp. japonica
Os03g0811100 Oryza sativa ssp. japonica
Os06g0245600 Oryza sativa ssp. japonica
Peaxi162Scf00269g00514 Petunia axillaris
Peaxi162Scf00394g00910 Petunia axillaris
Peaxi162Scf01713g00016 Petunia axillaris
PGR004G1605 Punica granatum
PGR046G0002 Punica granatum
PGR119G0225 Punica granatum
PGR119G1003 Punica granatum
PGSC0003DMG400026385 Solanum tuberosum
PGSC0003DMG400026627 Solanum tuberosum
Phvul.002G165600 Phaseolus vulgaris
Phvul.003G057600 Phaseolus vulgaris
Phvul.006G178400 Phaseolus vulgaris
Phvul.008G074800 Phaseolus vulgaris
Potri.001G254304 Populus trichocarpa
Potri.001G254308 Populus trichocarpa
Potri.004G053400 Populus trichocarpa
Potri.009G049400 Populus trichocarpa
Potri.009G049500 Populus trichocarpa
Potri.011G063400 Populus trichocarpa
Pp3c10_2940 Physcomitrium patens
Pp3c15_25050 Physcomitrium patens
Pp3c1_27150 Physcomitrium patens
Pp3c1_700 Physcomitrium patens
Pp3c23_1090 Physcomitrium patens
Pp3c2_15490 Physcomitrium patens
PRCOL_00004019 Prasinoderma coloniale
PRCOL_00004252 Prasinoderma coloniale
Prupe.4G057500 Prunus persica
Prupe.4G257000 Prunus persica
Prupe.4G257100 Prunus persica
Psat0s3604g0040 Pisum sativum
Psat1g200160 Pisum sativum
Psat1g200320 Pisum sativum
Psat3g114240 Pisum sativum
Psat7g118680 Pisum sativum
PSO063G0490 Papaver somniferum
PSO170G2976 Papaver somniferum
PSO210G7517 Papaver somniferum
PSO339G2769 Papaver somniferum
PSO339G5991 Papaver somniferum
PSO384G0341 Papaver somniferum
PSO384G1304 Papaver somniferum
PSO782G2058 Papaver somniferum
QL01p018045 Quercus lobata
QL01p018054 Quercus lobata
QL01p018064 Quercus lobata
QL05p044197 Quercus lobata
RcHm_v2.0_Chr5g0010061 Rosa chinensis
RcHm_v2.0_Chr5g0051161 Rosa chinensis
RcHm_v2.0_Chr5g0051191 Rosa chinensis
Rhsim02G0140300 Rhododendron simsii
Rhsim13G0217100 Rhododendron simsii
Rhsim13G0217200 Rhododendron simsii
Sabra04G0034800 Salix brachista
SalBow4G0828 Salvia bowleyana
SalBow6G0254 Salvia bowleyana
SalBow8G5070 Salvia bowleyana
Sc09g0000900 Simmondsia chinensis
Sc16g0011190 Simmondsia chinensis
Sc16g0011200 Simmondsia chinensis
Sc17g0005810 Simmondsia chinensis
Sed0013081 Sechium edule
Sed0024633 Sechium edule
Sed0025458 Sechium edule
Sed0027916 Sechium edule
SEGI_06958 Sequoiadendron giganteum
SEGI_12235 Sequoiadendron giganteum
SEGI_14967 Sequoiadendron giganteum
SEGI_16617 Sequoiadendron giganteum
SEGI_22632 Sequoiadendron giganteum
SEGI_25456 Sequoiadendron giganteum
SEGI_28588 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00008 Striga asiatica
SGA_v2.0_scaffold25G10748 Striga asiatica
SGA_v2.0_scaffold3G01472 Striga asiatica
SHI27451 Sapria himalayana
SMO141G0042 Selaginella moellendorffii
SMO356G0325 Selaginella moellendorffii
Solyc02g086227.1 Solanum lycopersicum
Solyc02g086250.4 Solanum lycopersicum
Solyc04g015490.4 Solanum lycopersicum
Solyc10g008740.3 Solanum lycopersicum
Sopen02g030930 Solanum pennellii
Sopen04g007560 Solanum pennellii
Sopen10g004510 Solanum pennellii
Sp1g07180 Schrenkiella parvula
Sp3g18100 Schrenkiella parvula
Sp7g15540 Schrenkiella parvula
TAR369G0010 Trochodendron aralioides
TAR383G0171 Trochodendron aralioides
TAR623G0319 Trochodendron aralioides
TAR623G0653 Trochodendron aralioides
TAR623G0906 Trochodendron aralioides
TAR623G0977 Trochodendron aralioides
TAR623G1057 Trochodendron aralioides
TAR623G1061 Trochodendron aralioides
TAR623G1702 Trochodendron aralioides
TAR629G0187 Trochodendron aralioides
TAR629G0363 Trochodendron aralioides
TAR629G1481 Trochodendron aralioides
THA.LOC104806148 Tarenaya hassleriana
THA.LOC104809267 Tarenaya hassleriana
THA.LOC104811411 Tarenaya hassleriana
THA.LOC104814243 Tarenaya hassleriana
THA.LOC104826486 Tarenaya hassleriana
Thecc.06G175800 Theobroma cacao
Thecc.09G241000 Theobroma cacao
Thecc.09G241300 Theobroma cacao
Thhalv10000878m.g Eutrema salsugineum
Thhalv10006894m.g Eutrema salsugineum
Thhalv10021184m.g Eutrema salsugineum
Thhalv10023995m.g Eutrema salsugineum
Thhalv10025291m.g Eutrema salsugineum
TPR.G11795 Trifolium pratense
TPR.G16264 Trifolium pratense
TPR.G26927 Trifolium pratense
TPR.G37864 Trifolium pratense
TWI14G1124 Tripterygium wilfordii
TWI23G0345 Tripterygium wilfordii
TWI38G2261 Tripterygium wilfordii
TWI39G0518 Tripterygium wilfordii
TWI63G0441 Tripterygium wilfordii
unitig_8.g3773 Utricularia gibba
vmacro04117 Vaccinium macrocarpon
vmacro04118 Vaccinium macrocarpon
vmacro10456 Vaccinium macrocarpon
vmacro15960 Vaccinium macrocarpon
VMungo0251G0134 Vigna mungo
VMungo0540G1247 Vigna mungo
VMungo0540G1497 Vigna mungo
VMungo1215G0901 Vigna mungo
VMungo1383G1695 Vigna mungo
VMungo1383G2912 Vigna mungo
VMungo1383G3216 Vigna mungo
Zm00001eb128570 Zea mays
Zm00001eb212250 Zea mays
Zm00001eb407780 Zea mays

User provided reference genes

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