Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27460 Brassica napus
A07p27470 Brassica napus
A07p44030 Brassica napus
A07p44040 Brassica napus
A08p31220 Brassica napus
A09p64230 Brassica napus
Aa31LG4G2150 Aethionema arabicum
Aa31LG4G2170 Aethionema arabicum
Aa31LG4G2180 Aethionema arabicum
Aa31LG7G1330 Aethionema arabicum
Aa31sc224G30 Aethionema arabicum
Actinidia12574 Actinidia chinensis
Actinidia16796 Actinidia chinensis
Actinidia24394 Actinidia chinensis
Actinidia35579 Actinidia chinensis
Ah.06g185320 Amaranthus hybridus
Ah.06g185330 Amaranthus hybridus
AL1G29080 Arabidopsis lyrata
AL2G39240 Arabidopsis lyrata
AL2G39250 Arabidopsis lyrata
AL2G39260 Arabidopsis lyrata
Aqoxy1G02074 Aquilegia oxysepala
Aqoxy1G02075 Aquilegia oxysepala
Aqoxy1G02479 Aquilegia oxysepala
Aqoxy1G02486 Aquilegia oxysepala
Aqoxy2G01333 Aquilegia oxysepala
Aqoxy3G01238 Aquilegia oxysepala
Aqoxy4G00240 Aquilegia oxysepala
Aqoxy4G00248 Aquilegia oxysepala
Aqoxy4G00274 Aquilegia oxysepala
Aqoxy7G02758 Aquilegia oxysepala
AT1G16905 Arabidopsis thaliana
AT1G78820 Arabidopsis thaliana
AT1G78830 Arabidopsis thaliana
AT1G78850 Arabidopsis thaliana
AT1G78860 Arabidopsis thaliana
Atru.chr1.4049 Acer truncatum
Atru.chr1.4050 Acer truncatum
Atru.chr10.1541 Acer truncatum
Atru.chr2.2153 Acer truncatum
Atru.chr2.2154 Acer truncatum
Atru.chr2.2162 Acer truncatum
Atru.chr6.3561 Acer truncatum
Atru.chr6.3562 Acer truncatum
AUR62009448 Chenopodium quinoa
AUR62009449 Chenopodium quinoa
AUR62009450 Chenopodium quinoa
AUR62009451 Chenopodium quinoa
AUR62019572 Chenopodium quinoa
AUR62023132 Chenopodium quinoa
AUR62042770 Chenopodium quinoa
BcaB02g07179 Brassica carinata
BcaB02g07180 Brassica carinata
BcaB02g07182 Brassica carinata
BcaB03g16039 Brassica carinata
BcaB03g16043 Brassica carinata
BcaB03g16046 Brassica carinata
BcaB08g37446 Brassica carinata
BcaB08g37447 Brassica carinata
BcaC07g38825 Brassica carinata
BcaC08g45406 Brassica carinata
BcaC08g45407 Brassica carinata
BcaC08g45408 Brassica carinata
BcaC08g47448 Brassica carinata
BcaC08g47451 Brassica carinata
BolC6t38201H Brassica oleracea
BolC6t38202H Brassica oleracea
BolC6t40290H Brassica oleracea
BolC6t40293H Brassica oleracea
BolC8t49389H Brassica oleracea
BraA07t30387Z Brassica rapa
BraA07t30388Z Brassica rapa
BraA07t31911Z Brassica rapa
BraA08t35045Z Brassica rapa
BraA09t41766Z Brassica rapa
C01p46320 Brassica napus
C06p30380 Brassica napus
C06p30390 Brassica napus
C06p52730 Brassica napus
C06p52760 Brassica napus
C08p17640 Brassica napus
C08p47830 Brassica napus
C08p47840 Brassica napus
CAN.G370.77 Capsicum annuum
CAN.G375.10 Capsicum annuum
CAN.G375.11 Capsicum annuum
CAN.G464.4 Capsicum annuum
CANSAT01G0255 Cannabis sativa
CANSAT01G2228 Cannabis sativa
CARHR017400 Cardamine hirsuta
CARHR072390 Cardamine hirsuta
CARHR072410 Cardamine hirsuta
CARHR072430 Cardamine hirsuta
CARHR072440 Cardamine hirsuta
Carub.0002s2565 Capsella rubella
Carub.0002s2566 Capsella rubella
Carub.0002s2568 Capsella rubella
Cc05_g11140 Coffea canephora
Cc05_g11150 Coffea canephora
Cc05_g11160 Coffea canephora
Cc07_g15430 Coffea canephora
CDE02G1683 Ceratophyllum demersum
CDE02G1853 Ceratophyllum demersum
CDE02G3122 Ceratophyllum demersum
CDE04G2881 Ceratophyllum demersum
CDE06G2027 Ceratophyllum demersum
CDE08G1265 Ceratophyllum demersum
CDE09G0337 Ceratophyllum demersum
CDE10G0619 Ceratophyllum demersum
Cfa019570 Carpinus fangiana
Cfa019571 Carpinus fangiana
Ciclev10015566m.g Citrus clementina
Ciclev10017951m.g Citrus clementina
Ciclev10020160m.g Citrus clementina
Ciclev10020204m.g Citrus clementina
Ciclev10020212m.g Citrus clementina
Ciclev10020247m.g Citrus clementina
Ciclev10020396m.g Citrus clementina
Ciclev10023437m.g Citrus clementina
Ciclev10023807m.g Citrus clementina
Ciclev10023808m.g Citrus clementina
Ciclev10024064m.g Citrus clementina
Ciclev10024219m.g Citrus clementina
CiPaw.12G113700 Carya illinoinensis
CiPaw.12G113800 Carya illinoinensis
ClCG07G010310 Citrullus lanatus
ClCG11G017500 Citrullus lanatus
COL.COLO4_17556 Corchorus olitorius
COL.COLO4_17557 Corchorus olitorius
COL.COLO4_17559 Corchorus olitorius
COL.COLO4_17561 Corchorus olitorius
COL.COLO4_31292 Corchorus olitorius
COL.COLO4_31293 Corchorus olitorius
COL.COLO4_31294 Corchorus olitorius
COL.COLO4_33643 Corchorus olitorius
COL.COLO4_33648 Corchorus olitorius
Cpa.g.sc77.1 Carica papaya
Cpa.g.sc97.106 Carica papaya
Cpa.g.sc97.107 Carica papaya
Cpa.g.sc97.108 Carica papaya
Cpa.g.sc97.109 Carica papaya
CsaV3_4G008020 Cucumis sativus L.
CsaV3_4G033160 Cucumis sativus L.
CSS0034619 Camellia sinensis var. sinensis
CSS0037345 Camellia sinensis var. sinensis
CSS0039911 Camellia sinensis var. sinensis
DCAR_007947 Daucus carota
DCAR_007948 Daucus carota
DCAR_017168 Daucus carota
DCAR_027997 Daucus carota
DCAR_027998 Daucus carota
DCAR_027999 Daucus carota
Dinv08371 Davidia involucrata
Dinv11415 Davidia involucrata
Dinv16771 Davidia involucrata
Dinv18361 Davidia involucrata
Dinv38019 Davidia involucrata
Duzib213G0063 Durio zibethinus
Duzib213G0762 Durio zibethinus
Duzib213G0921 Durio zibethinus
ECA236G2363 Erigeron canadensis
ECA236G4058 Erigeron canadensis
ECA236G4195 Erigeron canadensis
ECA236G4347 Erigeron canadensis
EL10Ac3g07269 Beta vulgaris
EL10Ac4g08338 Beta vulgaris
Eucgr.F01233 Eucalyptus grandis
Eucgr.F01234 Eucalyptus grandis
Eucgr.F01235 Eucalyptus grandis
Eucgr.F01236 Eucalyptus grandis
Eucgr.F01237 Eucalyptus grandis
Eucgr.K01186 Eucalyptus grandis
Eucgr.K03227 Eucalyptus grandis
FAN11G0462 Fragaria x ananassa
FAN11G1534 Fragaria x ananassa
FAN16G0461 Fragaria x ananassa
FAN16G0892 Fragaria x ananassa
FAN16G2395 Fragaria x ananassa
FAN16G3243 Fragaria x ananassa
FAN21G0553 Fragaria x ananassa
FAN21G1542 Fragaria x ananassa
FAN21G3781 Fragaria x ananassa
FAN25G1961 Fragaria x ananassa
FAN25G3341 Fragaria x ananassa
FvH4_3g18370 Fragaria vesca
FvH4_3g18371 Fragaria vesca
FvH4_3g18380 Fragaria vesca
FvH4_3g18382 Fragaria vesca
FvH4_3g18383 Fragaria vesca
FvH4_3g18410 Fragaria vesca
Glyma.13G270100 Glycine max
Glyma.13G270200 Glycine max
Gohir.A01G055300 Gossypium hirsutum
Gohir.A01G055400 Gossypium hirsutum
Gohir.A01G055500 Gossypium hirsutum
Gohir.A10G037200 Gossypium hirsutum
Gohir.A13G149200 Gossypium hirsutum
Gohir.A13G149301 Gossypium hirsutum
Gohir.D01G042760 Gossypium hirsutum
Gohir.D01G042762 Gossypium hirsutum
Gohir.D01G042764 Gossypium hirsutum
Gohir.D10G037800 Gossypium hirsutum
Gohir.D10G037901 Gossypium hirsutum
Gohir.D10G038001 Gossypium hirsutum
Gohir.D13G153700 Gossypium hirsutum
Gorai.002G061100 Gossypium raimondii
Gorai.002G061300 Gossypium raimondii
Gorai.011G039800 Gossypium raimondii
Gorai.011G039900 Gossypium raimondii
Gorai.013G173600 Gossypium raimondii
GSVIVG01014205001 Vitis vinifera
HanXRQChr06g0167851 Helianthus annuus
HanXRQChr06g0167861 Helianthus annuus
HanXRQChr11g0330411 Helianthus annuus
HanXRQChr11g0331071 Helianthus annuus
HanXRQChr13g0386521 Helianthus annuus
HanXRQChr13g0387681 Helianthus annuus
HanXRQChr17g0558851 Helianthus annuus
HanXRQChr17g0558861 Helianthus annuus
HanXRQChr17g0558881 Helianthus annuus
HanXRQChr17g0564111 Helianthus annuus
HanXRQChr17g0564121 Helianthus annuus
HanXRQChr17g0564131 Helianthus annuus
HanXRQChr17g0564141 Helianthus annuus
Haze_09329 Corylus avellana
Haze_09330 Corylus avellana
Hma1.2p1_0290F.1_g114755 Hydrangea macrophylla
Hma1.2p1_0290F.1_g114760 Hydrangea macrophylla
HPP92_008749 Vanilla planifolia
Lalb_Chr20g0109291 Lupinus albus
Lj1A830T48 Lonicera japonica
Lj1g0015728 Lotus japonicus
Lj3g0006727 Lotus japonicus
Lj8C148T6 Lonicera japonica
Lsat_1_v5_gn_1_16741 Lactuca sativa
Lsat_1_v5_gn_7_102680 Lactuca sativa
Lsat_1_v5_gn_7_102740 Lactuca sativa
Lsat_1_v5_gn_7_102760 Lactuca sativa
Lsat_1_v5_gn_7_102800 Lactuca sativa
Lsat_1_v5_gn_7_103561 Lactuca sativa
Lsat_1_v5_gn_8_31781 Lactuca sativa
Manes.15G093900 Manihot esculenta
Manes.15G093966 Manihot esculenta
Manes.15G094032 Manihot esculenta
Manes.15G094100 Manihot esculenta
Manes.15G094200 Manihot esculenta
Manes.15G094300 Manihot esculenta
Manes.15G094400 Manihot esculenta
MBI06_g08587_MAGBIO Magnolia biondii
MBI06_g08588_MAGBIO Magnolia biondii
MBI06_g08589_MAGBIO Magnolia biondii
MBI06_g17901_MAGBIO Magnolia biondii
MBI06_g17902_MAGBIO Magnolia biondii
MBI06_g17903_MAGBIO Magnolia biondii
MBI06_g17904_MAGBIO Magnolia biondii
MBI06_g45731_MAGBIO Magnolia biondii
MBI06_g45732_MAGBIO Magnolia biondii
MD03G1242300 Malus domestica
MD03G1242400 Malus domestica
MD11G1262100 Malus domestica
MD11G1262300 Malus domestica
MD11G1262400 Malus domestica
MD11G1262600 Malus domestica
MD11G1262700 Malus domestica
Medtr2g076490 Medicago truncatula
Medtr2g076590 Medicago truncatula
Medtr2g076610 Medicago truncatula
Medtr2g076650 Medicago truncatula
MELO3C016135.2 Cucumis melo
Migut.H01431 Erythranthe guttata
Migut.H01432 Erythranthe guttata
Migut.M00733 Erythranthe guttata
Nitab4.5_0000246g0260 Nicotiana tabacum
Nitab4.5_0000246g0280 Nicotiana tabacum
Nitab4.5_0000246g0290 Nicotiana tabacum
Nitab4.5_0000605g0170 Nicotiana tabacum
Nitab4.5_0000605g0200 Nicotiana tabacum
Nitab4.5_0001145g0020 Nicotiana tabacum
Nitab4.5_0001923g0060 Nicotiana tabacum
Nitab4.5_0007675g0010 Nicotiana tabacum
Nn1g04417 Nelumbo nucifera
Nn1g04418 Nelumbo nucifera
Nn1g04420 Nelumbo nucifera
Nn1g04762 Nelumbo nucifera
Nn5g28804 Nelumbo nucifera
Oeu031034.1 Olea europaea
Oeu039920.1 Olea europaea
Os06g0551800 Oryza sativa ssp. japonica
Peaxi162Scf00069g02239 Petunia axillaris
Peaxi162Scf00069g02248 Petunia axillaris
Peaxi162Scf00252g00023 Petunia axillaris
PGR083G0107 Punica granatum
PGR083G1313 Punica granatum
PGSC0003DMG400007073 Solanum tuberosum
PGSC0003DMG400010240 Solanum tuberosum
PGSC0003DMG402007101 Solanum tuberosum
Phvul.005G061160 Phaseolus vulgaris
Phvul.005G065700 Phaseolus vulgaris
Phvul.005G066000 Phaseolus vulgaris
Potri.001G391200 Populus trichocarpa
Potri.001G391300 Populus trichocarpa
Potri.010G005900 Populus trichocarpa
Potri.011G066200 Populus trichocarpa
Potri.011G110000 Populus trichocarpa
Potri.011G110200 Populus trichocarpa
Potri.011G110300 Populus trichocarpa
Potri.011G110500 Populus trichocarpa
Prupe.4G165500 Prunus persica
Prupe.4G165600 Prunus persica
Prupe.4G165700 Prunus persica
Prupe.4G166000 Prunus persica
Prupe.4G166100 Prunus persica
Prupe.4G166200 Prunus persica
Prupe.4G166300 Prunus persica
Psat5g238120 Pisum sativum
PSO017G5571 Papaver somniferum
PSO017G5720 Papaver somniferum
PSO017G6014 Papaver somniferum
PSO063G4495 Papaver somniferum
PSO135G0969 Papaver somniferum
PSO170G0631 Papaver somniferum
PSO170G1402 Papaver somniferum
PSO170G1619 Papaver somniferum
PSO170G1712 Papaver somniferum
PSO170G2048 Papaver somniferum
PSO170G2903 Papaver somniferum
PSO170G3103 Papaver somniferum
PSO170G6153 Papaver somniferum
PSO170G6707 Papaver somniferum
PSO210G3199 Papaver somniferum
PSO210G5328 Papaver somniferum
PSO339G0763 Papaver somniferum
PSO339G1186 Papaver somniferum
PSO339G1620 Papaver somniferum
PSO339G1941 Papaver somniferum
PSO339G2216 Papaver somniferum
PSO339G4082 Papaver somniferum
PSO339G5022 Papaver somniferum
PSO339G5728 Papaver somniferum
PSO384G0100 Papaver somniferum
PSO384G0266 Papaver somniferum
PSO384G0445 Papaver somniferum
PSO384G0911 Papaver somniferum
PSO384G1292 Papaver somniferum
PSO384G3014 Papaver somniferum
PSO384G4730 Papaver somniferum
PSO407G0117 Papaver somniferum
PSO407G0180 Papaver somniferum
PSO407G0199 Papaver somniferum
PSO407G0278 Papaver somniferum
PSO407G0360 Papaver somniferum
PSO407G0388 Papaver somniferum
PSO407G0398 Papaver somniferum
PSO447G0323 Papaver somniferum
PSO478G1526 Papaver somniferum
PSO478G1846 Papaver somniferum
PSO478G1994 Papaver somniferum
PSO478G3552 Papaver somniferum
PSO541G2225 Papaver somniferum
PSO675G0540 Papaver somniferum
PSO675G5243 Papaver somniferum
PSO675G6580 Papaver somniferum
PSO732G0056 Papaver somniferum
PSO732G0556 Papaver somniferum
PSO782G0699 Papaver somniferum
PSO782G5685 Papaver somniferum
PSO832G2555 Papaver somniferum
QL08p026418 Quercus lobata
RcHm_v2.0_Chr5g0031021 Rosa chinensis
RcHm_v2.0_Chr5g0031031 Rosa chinensis
RcHm_v2.0_Chr5g0031041 Rosa chinensis
RcHm_v2.0_Chr5g0031051 Rosa chinensis
RcHm_v2.0_Chr5g0031081 Rosa chinensis
RcHm_v2.0_Chr5g0031091 Rosa chinensis
RcHm_v2.0_Chr5g0031101 Rosa chinensis
RcHm_v2.0_Chr5g0031111 Rosa chinensis
RcHm_v2.0_Chr5g0031131 Rosa chinensis
RcHm_v2.0_Chr5g0031141 Rosa chinensis
Sabra11G0047800 Salix brachista
Sabra11G0047900 Salix brachista
Sabra11G0097500 Salix brachista
Sabra11G0097600 Salix brachista
Sabra11G0097800 Salix brachista
Sabra11G0098100 Salix brachista
Sabra16G0256600 Salix brachista
Sabra16G0256700 Salix brachista
Sc15g0000070 Simmondsia chinensis
Sc16g0007530 Simmondsia chinensis
Sed0002906 Sechium edule
Sed0020381 Sechium edule
Sed0021845 Sechium edule
Sed0023276 Sechium edule
SEGI_01697 Sequoiadendron giganteum
SEGI_11167 Sequoiadendron giganteum
SEGI_19757 Sequoiadendron giganteum
SEGI_22265 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23372 Striga asiatica
SMO115G0298 Selaginella moellendorffii
SMO118G0119 Selaginella moellendorffii
SMO143G0112 Selaginella moellendorffii
SMO146G0380 Selaginella moellendorffii
SMO173G0014 Selaginella moellendorffii
SMO173G0074 Selaginella moellendorffii
SMO271G0061 Selaginella moellendorffii
SMO287G0004 Selaginella moellendorffii
SMO308G0027 Selaginella moellendorffii
SMO334G0100 Selaginella moellendorffii
SMO334G0131 Selaginella moellendorffii
SMO347G0331 Selaginella moellendorffii
Solyc02g076830.1 Solanum lycopersicum
Solyc07g055415.1 Solanum lycopersicum
Solyc07g062480.2 Solanum lycopersicum
Solyc07g062490.1 Solanum lycopersicum
Sopen02g021730 Solanum pennellii
Sopen07g030720 Solanum pennellii
Sopen07g030730 Solanum pennellii
Sp5g33860 Schrenkiella parvula
Sp5g33870 Schrenkiella parvula
Sp7g12390 Schrenkiella parvula
TAR626G0421 Trochodendron aralioides
TAR626G0677 Trochodendron aralioides
TAR627G0172 Trochodendron aralioides
TAR627G0577 Trochodendron aralioides
THA.LOC104808094 Tarenaya hassleriana
THA.LOC104812322 Tarenaya hassleriana
THA.LOC104814002 Tarenaya hassleriana
THA.LOC104814003 Tarenaya hassleriana
THA.LOC104824584 Tarenaya hassleriana
Thecc.06G170500 Theobroma cacao
Thecc.07G110300 Theobroma cacao
Thecc.07G110400 Theobroma cacao
Thhalv10007630m.g Eutrema salsugineum
Thhalv10007731m.g Eutrema salsugineum
Thhalv10018557m.g Eutrema salsugineum
Thhalv10018565m.g Eutrema salsugineum
TPR.G40219 Trifolium pratense
TWI38G0034 Tripterygium wilfordii
TWI39G0453 Tripterygium wilfordii
TWI39G0797 Tripterygium wilfordii
VMungo1080G0786 Vigna mungo
VMungo1080G1809 Vigna mungo

User provided reference genes

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