Gene: AT1G78850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G78850
  • Transcript Identifier AT1G78850.1
  • Gene Type Coding gene
  • Location Chr1 : 29642072-29643397 : negative

Gene Family Information

  • ID HOM05D001422
  • #Genes/#Species 441/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G78850.1
  • uniprot Q9ZVA4

Descriptions

  • Description D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
  • Computational description D-mannose binding lectin protein with Apple-like carbohydrate-binding domain; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: phloem, stem, guard cell, cultured cell, callus; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78860.1); Has 2743 Blast hits to 2677 proteins in 112 species: Archae - 0; Bacteria - 63; Metazoa - 5; Fungi - 0; Plants - 2661; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071456
HEP
Gene Ontologycellular response to hypoxia1
GO:1904383
IEP
Gene Ontologyresponse to sodium phosphate2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0005539
IPI
Gene Ontologyglycosaminoglycan binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005829
IDA
GOA Databasecytosol
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast3
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0005618
IDA
IEA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall5
GO:0005739
HDA
Gene Ontologymitochondrion6
GO:0099503
HDA
Gene Ontologysecretory vesicle7
GO:0000325
HDA
Gene Ontologyplant-type vacuole8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036426 Bulb-type lectin domain superfamily
IPR001480 Bulb-type lectin domain
IPR035446 S-locus-specific glycoprotein/EP1
Mapman id Description
35.1 not assigned.annotated