Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35340 Brassica napus
A02p33830 Brassica napus
A03p41120 Brassica napus
A03p41130 Brassica napus
A05p30340 Brassica napus
A06p09630 Brassica napus
A08p27200 Brassica napus
A08p27210 Brassica napus
A09p62920 Brassica napus
Aa31LG10G4350 Aethionema arabicum
Aa31LG1G1340 Aethionema arabicum
Aa31LG2G6800 Aethionema arabicum
Aa31LG7G8800 Aethionema arabicum
Aa31LG8G6050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2490 Anthoceros agrestis
Actinidia00440 Actinidia chinensis
Actinidia12949 Actinidia chinensis
Actinidia18964 Actinidia chinensis
Actinidia19897 Actinidia chinensis
Actinidia27957 Actinidia chinensis
Actinidia31919 Actinidia chinensis
Actinidia35061 Actinidia chinensis
Ah.02g127490 Amaranthus hybridus
AL1G25320 Arabidopsis lyrata
AL1G39550 Arabidopsis lyrata
AL3G32660 Arabidopsis lyrata
AL5G13950 Arabidopsis lyrata
AL5G13980 Arabidopsis lyrata
Aqoxy3G00604 Aquilegia oxysepala
Aqoxy3G03798 Aquilegia oxysepala
Aqoxy5G01237 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26IG8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.35DV36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.80KEYX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E87HJI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FK23LZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FU2LG2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IGY6G6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M69XSS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MG7W0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QN1FMQ Arachis hypogaea
AT1G13580 Arabidopsis thaliana
AT1G26200 Arabidopsis thaliana
AT3G19260 Arabidopsis thaliana
AT3G25540 Arabidopsis thaliana
ATR0691G013 Amborella trichopoda
ATR1102G047 Amborella trichopoda
Atru.chr11.1517 Acer truncatum
Atru.chr5.2700 Acer truncatum
Atru.chr9.682 Acer truncatum
AUR62003021 Chenopodium quinoa
AUR62007824 Chenopodium quinoa
AUR62007825 Chenopodium quinoa
AUR62023915 Chenopodium quinoa
AUR62038326 Chenopodium quinoa
BcaB04g18169 Brassica carinata
BcaB04g19032 Brassica carinata
BcaB04g20714 Brassica carinata
BcaB06g25983 Brassica carinata
BcaB07g29724 Brassica carinata
BcaB08g34313 Brassica carinata
BcaC01g01719 Brassica carinata
BcaC01g01720 Brassica carinata
BcaC01g01721 Brassica carinata
BcaC01g03640 Brassica carinata
BcaC03g17266 Brassica carinata
BcaC05g28507 Brassica carinata
BcaC06g31134 Brassica carinata
BcaC06g31655 Brassica carinata
BcaC06g33982 Brassica carinata
BcaC07g41634 Brassica carinata
BcaC09g48881 Brassica carinata
BcaNung06526 Brassica carinata
BolC1t04452H Brassica oleracea
BolC2t11292H Brassica oleracea
BolC3t17313H Brassica oleracea
BolC3t19558H Brassica oleracea
BolC3t19560H Brassica oleracea
BolC5t29884H Brassica oleracea
BolC5t33310H Brassica oleracea
BolC7t43966H Brassica oleracea
BolC8t52185H Brassica oleracea
BraA01t03615Z Brassica rapa
BraA02t08401Z Brassica rapa
BraA03t13269Z Brassica rapa
BraA05t21872Z Brassica rapa
BraA06t24154Z Brassica rapa
BraA08t34666Z Brassica rapa
BraA08t34667Z Brassica rapa
BraA09t41650Z Brassica rapa
C01p44850 Brassica napus
C02p52070 Brassica napus
C03p50210 Brassica napus
C03p72610 Brassica napus
C03p72640 Brassica napus
C05p45910 Brassica napus
C07p34350 Brassica napus
C08p46360 Brassica napus
CAN.G1041.12 Capsicum annuum
CAN.G1305.2 Capsicum annuum
CAN.G184.16 Capsicum annuum
CAN.G352.37 Capsicum annuum
CAN.G667.3 Capsicum annuum
CAN.G982.27 Capsicum annuum
CANSAT25G3592 Cannabis sativa
CANSAT64G1860 Cannabis sativa
CANSAT80G2015 Cannabis sativa
CARHR013900 Cardamine hirsuta
CARHR013910 Cardamine hirsuta
CARHR025710 Cardamine hirsuta
CARHR039730 Cardamine hirsuta
CARHR094660 Cardamine hirsuta
CARHR105750 Cardamine hirsuta
CARHR146450 Cardamine hirsuta
Carub.0001s1326 Capsella rubella
Carub.0001s2476 Capsella rubella
Carub.0001s3888 Capsella rubella
Carub.0003s1909 Capsella rubella
Carub.0005s0325 Capsella rubella
Ca_18685_v3 Cicer arietinum L.
Ca_22512_v3 Cicer arietinum L.
CBR_g48653 Chara braunii
CBR_g50435 Chara braunii
Cc02_g18800 Coffea canephora
Cc04_g07950 Coffea canephora
Cc11_g11210 Coffea canephora
CDE02G4740 Ceratophyllum demersum
CDE03G0237 Ceratophyllum demersum
CDE04G2076 Ceratophyllum demersum
CDE04G2420 Ceratophyllum demersum
CDE04G3468 Ceratophyllum demersum
Cfa008826 Carpinus fangiana
Cfa022851 Carpinus fangiana
Ciclev10021281m.g Citrus clementina
Ciclev10021283m.g Citrus clementina
Ciclev10027495m.g Citrus clementina
Ciclev10027558m.g Citrus clementina
Ciclev10028986m.g Citrus clementina
Ciclev10032604m.g Citrus clementina
CiPaw.05G006700 Carya illinoinensis
CiPaw.05G119900 Carya illinoinensis
CiPaw.06G096200 Carya illinoinensis
CiPaw.06G172400 Carya illinoinensis
CiPaw.15G117800 Carya illinoinensis
ClCG01G007400 Citrullus lanatus
ClCG02G005920 Citrullus lanatus
COL.COLO4_07846 Corchorus olitorius
COL.COLO4_27748 Corchorus olitorius
COL.COLO4_32655 Corchorus olitorius
Cpa.g.sc53.9 Carica papaya
Cpa.g.sc62.10 Carica papaya
Cre09.g400516 Chlamydomonas reinhardtii
Cre17.g726400 Chlamydomonas reinhardtii
CsaV3_5G018870 Cucumis sativus L.
CsaV3_7G008620 Cucumis sativus L.
CSS0005843 Camellia sinensis var. sinensis
CSS0007166 Camellia sinensis var. sinensis
CSS0013751 Camellia sinensis var. sinensis
CSS0020717 Camellia sinensis var. sinensis
CSS0030324 Camellia sinensis var. sinensis
CSS0032519 Camellia sinensis var. sinensis
CSS0037600 Camellia sinensis var. sinensis
CSS0041339 Camellia sinensis var. sinensis
CSS0047656 Camellia sinensis var. sinensis
DCAR_026691 Daucus carota
DCAR_029057 Daucus carota
DCAR_030064 Daucus carota
Dinv08282 Davidia involucrata
Dinv15560 Davidia involucrata
Dinv16570 Davidia involucrata
Dinv36838 Davidia involucrata
Dinv36839 Davidia involucrata
Dinv42158 Davidia involucrata
Duzib052G0202 Durio zibethinus
Duzib132G0032 Durio zibethinus
Duzib205G1203 Durio zibethinus
Duzib248G0165 Durio zibethinus
Duzib248G0526 Durio zibethinus
Duzib251G0136 Durio zibethinus
ECA233G1075 Erigeron canadensis
ECA234G0459 Erigeron canadensis
ECA234G0677 Erigeron canadensis
ECA240G1868 Erigeron canadensis
EL10Ac9g21103 Beta vulgaris
Eucgr.B03093 Eucalyptus grandis
Eucgr.G01439 Eucalyptus grandis
Eucgr.G01442 Eucalyptus grandis
Eucgr.G02399 Eucalyptus grandis
Eucgr.I01150 Eucalyptus grandis
Eucgr.K00842 Eucalyptus grandis
Eucgr.K02634 Eucalyptus grandis
FAN08G1992 Fragaria x ananassa
FAN12G2698 Fragaria x ananassa
FAN13G1837 Fragaria x ananassa
FAN17G1986 Fragaria x ananassa
FAN18G3151 Fragaria x ananassa
FAN22G0474 Fragaria x ananassa
FvH4_2g06020 Fragaria vesca
FvH4_4g28710 Fragaria vesca
FvH4_5g13070 Fragaria vesca
Glyma.02G126800 Glycine max
Glyma.02G127000 Glycine max
Glyma.02G132400 Glycine max
Glyma.07G212500 Glycine max
Glyma.08G269700 Glycine max
Glyma.16G091200 Glycine max
Gohir.A07G057800 Gossypium hirsutum
Gohir.A12G024100 Gossypium hirsutum
Gohir.A12G158200 Gossypium hirsutum
Gohir.A13G040300 Gossypium hirsutum
Gohir.A13G096600 Gossypium hirsutum
Gohir.D07G062600 Gossypium hirsutum
Gohir.D12G024700 Gossypium hirsutum
Gohir.D12G161300 Gossypium hirsutum
Gohir.D13G039000 Gossypium hirsutum
Gohir.D13G089800 Gossypium hirsutum
Gorai.001G066100 Gossypium raimondii
Gorai.008G025000 Gossypium raimondii
Gorai.008G174300 Gossypium raimondii
Gorai.013G043800 Gossypium raimondii
Gorai.013G102900 Gossypium raimondii
GSVIVG01010169001 Vitis vinifera
GSVIVG01031739001 Vitis vinifera
HanXRQChr08g0214791 Helianthus annuus
HanXRQChr09g0250401 Helianthus annuus
HanXRQChr12g0364541 Helianthus annuus
HanXRQChr16g0528281 Helianthus annuus
HanXRQChr17g0550791 Helianthus annuus
Haze_10082 Corylus avellana
Haze_11838 Corylus avellana
HPP92_000492 Vanilla planifolia
HPP92_015302 Vanilla planifolia
HPP92_018197 Vanilla planifolia
HPP92_019152 Vanilla planifolia
Hund00337 Selenicereus undatus
Hund05802 Selenicereus undatus
Hund06175 Selenicereus undatus
Hund25135 Selenicereus undatus
Lalb_Chr05g0219171 Lupinus albus
Lalb_Chr05g0229001 Lupinus albus
Lalb_Chr09g0328331 Lupinus albus
Lalb_Chr10g0099421 Lupinus albus
Lalb_Chr16g0391901 Lupinus albus
Lj2g0008803 Lotus japonicus
Lj3A1024T76 Lonicera japonica
Lj4g0003346 Lotus japonicus
Lj4g0009983 Lotus japonicus
Lj5A209G71 Lonicera japonica
Lj6A771G64 Lonicera japonica
Lj6A771T74 Lonicera japonica
Lj9A436T75 Lonicera japonica
Lj9C358T2 Lonicera japonica
Lsat_1_v5_gn_3_105401 Lactuca sativa
Lsat_1_v5_gn_4_21080 Lactuca sativa
Lsat_1_v5_gn_4_21140 Lactuca sativa
Lsat_1_v5_gn_8_37620 Lactuca sativa
Lsat_1_v5_gn_9_109860 Lactuca sativa
Manes.05G115800 Manihot esculenta
Manes.06G077800 Manihot esculenta
Manes.07G077800 Manihot esculenta
Manes.10G071500 Manihot esculenta
Manes.14G093201 Manihot esculenta
Mapoly0001s0204 Marchantia polymorpha
Mapoly0119s0040 Marchantia polymorpha
Mapoly0154s0016 Marchantia polymorpha
MBI14_g16234_MAGBIO Magnolia biondii
MBI15_g03196_MAGBIO Magnolia biondii
MCO01G405 Micromonas commoda
MD00G1035400 Malus domestica
MD05G1081300 Malus domestica
MD06G1207300 Malus domestica
MD09G1247100 Malus domestica
MD13G1053200 Malus domestica
MD14G1217800 Malus domestica
MD16G1052200 Malus domestica
Medtr4g086150 Medicago truncatula
Medtr5g049230 Medicago truncatula
Medtr5g049240 Medicago truncatula
Medtr8g069850 Medicago truncatula
MELO3C005172.2 Cucumis melo
MELO3C018448.2 Cucumis melo
Migut.B00348 Erythranthe guttata
Migut.B00349 Erythranthe guttata
Migut.E00268 Erythranthe guttata
Migut.J00253 Erythranthe guttata
Migut.L01133 Erythranthe guttata
Migut.N01187 Erythranthe guttata
MSTRG.13481 Avicennia marina
MSTRG.16744 Avicennia marina
MSTRG.20156 Avicennia marina
MSTRG.2283 Avicennia marina
MSTRG.27726 Avicennia marina
MSTRG.7710 Avicennia marina
Nitab4.5_0000027g0530 Nicotiana tabacum
Nitab4.5_0000149g0120 Nicotiana tabacum
Nitab4.5_0000435g0070 Nicotiana tabacum
Nitab4.5_0000646g0090 Nicotiana tabacum
Nitab4.5_0002097g0020 Nicotiana tabacum
Nitab4.5_0002805g0100 Nicotiana tabacum
Nitab4.5_0004666g0010 Nicotiana tabacum
Nitab4.5_0005249g0070 Nicotiana tabacum
Nitab4.5_0005310g0020 Nicotiana tabacum
Nitab4.5_0010998g0040 Nicotiana tabacum
Nn1g00045 Nelumbo nucifera
Nn1g04859 Nelumbo nucifera
Nn2g11849 Nelumbo nucifera
Nn3g17604 Nelumbo nucifera
Nn4g23605 Nelumbo nucifera
Nn5g30318 Nelumbo nucifera
Oeu006953.2 Olea europaea
Oeu010589.1 Olea europaea
Oeu024137.1 Olea europaea
Oeu025577.1 Olea europaea
Oeu025578.1 Olea europaea
Oeu054578.1 Olea europaea
Os02g0581300 Oryza sativa ssp. japonica
Os02g0728300 Oryza sativa ssp. japonica
Os03g0264000 Oryza sativa ssp. japonica
Os09g0372700 Oryza sativa ssp. japonica
Peaxi162Scf00017g03136 Petunia axillaris
Peaxi162Scf00152g00020 Petunia axillaris
Peaxi162Scf00188g00626 Petunia axillaris
Peaxi162Scf00204g00116 Petunia axillaris
PGR044G0831 Punica granatum
PGR102G1830 Punica granatum
PGR119G0419 Punica granatum
PGR142G3869 Punica granatum
PGSC0003DMG400024613 Solanum tuberosum
PGSC0003DMG400025120 Solanum tuberosum
PGSC0003DMG400025796 Solanum tuberosum
Phvul.003G281100 Phaseolus vulgaris
Phvul.003G292300 Phaseolus vulgaris
Potri.004G141000 Populus trichocarpa
Potri.008G113900 Populus trichocarpa
Potri.009G101800 Populus trichocarpa
Potri.010G134700 Populus trichocarpa
Potri.015G055000 Populus trichocarpa
Pp3c15_4530 Physcomitrium patens
Pp3c15_4537 Physcomitrium patens
Pp3c18_640 Physcomitrium patens
Pp3c19_9050 Physcomitrium patens
Pp3c23_10940 Physcomitrium patens
Pp3c4_17010 Physcomitrium patens
Pp3c9_8810 Physcomitrium patens
PRCOL_00001578 Prasinoderma coloniale
PRCOL_00006998 Prasinoderma coloniale
Prupe.1G298900 Prunus persica
Prupe.5G211700 Prunus persica
Prupe.8G125400 Prunus persica
Prupe.8G125600 Prunus persica
Psat2g098520 Pisum sativum
Psat2g101240 Pisum sativum
Psat4g113400 Pisum sativum
Psat7g124680 Pisum sativum
PSO063G5292 Papaver somniferum
PSO478G3498 Papaver somniferum
PSO541G4468 Papaver somniferum
PSO675G1618 Papaver somniferum
PSO782G4193 Papaver somniferum
QL03p047819 Quercus lobata
QL10p021640 Quercus lobata
QL10p021650 Quercus lobata
QL10p021665 Quercus lobata
QL11p035890 Quercus lobata
RcHm_v2.0_Chr4g0436831 Rosa chinensis
RcHm_v2.0_Chr6g0257331 Rosa chinensis
RcHm_v2.0_Chr7g0184061 Rosa chinensis
Rhsim05G0084500 Rhododendron simsii
Rhsim09G0117500 Rhododendron simsii
Rhsim12G0069900 Rhododendron simsii
Sabra08G0086200 Salix brachista
Sabra09G0077800 Salix brachista
Sabra10G0103500 Salix brachista
Sabra15G0079900 Salix brachista
SalBow3G1259 Salvia bowleyana
SalBow8G4569 Salvia bowleyana
SalBow8G5457 Salvia bowleyana
Sc04g0007150 Simmondsia chinensis
Sc18g0004080 Simmondsia chinensis
Sed0015764 Sechium edule
Sed0019257 Sechium edule
Sed0021733 Sechium edule
SEGI_20225 Sequoiadendron giganteum
SEGI_28549 Sequoiadendron giganteum
SEGI_32534 Sequoiadendron giganteum
SEGI_40358 Sequoiadendron giganteum
SEGI_40626 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06596 Striga asiatica
SGA_v2.0_scaffold14G06780 Striga asiatica
SGA_v2.0_scaffold16G07848 Striga asiatica
SGA_v2.0_scaffold32G13065 Striga asiatica
SGA_v2.0_scaffold59G20642 Striga asiatica
SGA_v2.0_scaffold90G27656 Striga asiatica
SMO118G0419 Selaginella moellendorffii
SMO196G0284 Selaginella moellendorffii
SMO361G0142 Selaginella moellendorffii
Solyc01g108230.3 Solanum lycopersicum
Solyc03g113050.1 Solanum lycopersicum
Solyc03g114600.4 Solanum lycopersicum
Solyc05g010280.3 Solanum lycopersicum
Sopen01g050450 Solanum pennellii
Sopen03g032130 Solanum pennellii
Sopen03g033670 Solanum pennellii
Sopen05g006050 Solanum pennellii
Sp1g11960 Schrenkiella parvula
Sp1g22460 Schrenkiella parvula
Sp1g36520 Schrenkiella parvula
Sp2g14800 Schrenkiella parvula
Sp3g17340 Schrenkiella parvula
TAR374G1302 Trochodendron aralioides
TAR381G0303 Trochodendron aralioides
TAR381G0387 Trochodendron aralioides
TAR622G0648 Trochodendron aralioides
TAR625G0201 Trochodendron aralioides
THA.LOC104803454 Tarenaya hassleriana
THA.LOC104821980 Tarenaya hassleriana
Thecc.02G100900 Theobroma cacao
Thecc.02G317800 Theobroma cacao
Thecc.03G112400 Theobroma cacao
Thhalv10004641m.g Eutrema salsugineum
Thhalv10008348m.g Eutrema salsugineum
Thhalv10008634m.g Eutrema salsugineum
Thhalv10021239m.g Eutrema salsugineum
TPR.G16494 Trifolium pratense
TPR.G24822 Trifolium pratense
TPR.G25419 Trifolium pratense
TPR.G2664 Trifolium pratense
TPR.G2673 Trifolium pratense
TWI31G0484 Tripterygium wilfordii
TWI31G0875 Tripterygium wilfordii
TWI73G1292 Tripterygium wilfordii
TWI75G0123 Tripterygium wilfordii
TWI79G1474 Tripterygium wilfordii
unitig_22.g5557 Utricularia gibba
unitig_62.g23704 Utricularia gibba
unitig_744.g24235 Utricularia gibba
vmacro01288 Vaccinium macrocarpon
vmacro10448 Vaccinium macrocarpon
vmacro19501 Vaccinium macrocarpon
VMungo0251G1663 Vigna mungo
VMungo0251G1699 Vigna mungo
Zm00001eb011640 Zea mays
Zm00001eb098730 Zea mays
Zm00001eb183320 Zea mays
Zm00001eb245340 Zea mays
Zm00001eb253380 Zea mays
Zm00001eb311390 Zea mays
Zm00001eb398050 Zea mays

User provided reference genes

Program Settings