Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22750 Brassica napus
A07p27190 Brassica napus
A07p44390 Brassica napus
A07p44400 Brassica napus
A07p44410 Brassica napus
A07p44420 Brassica napus
A09p13260 Brassica napus
A10p31940 Brassica napus
Aa31LG1G21150 Aethionema arabicum
Aa31LG4G1690 Aethionema arabicum
Aa31LG4G1700 Aethionema arabicum
Aa31LG7G960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1471 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5707 Anthoceros agrestis
Actinidia03515 Actinidia chinensis
Actinidia03632 Actinidia chinensis
Actinidia29415 Actinidia chinensis
Ah.04g150090 Amaranthus hybridus
Ah.04g150300 Amaranthus hybridus
Ah.04g150320 Amaranthus hybridus
Ah.09g231460 Amaranthus hybridus
Ah.13g077460 Amaranthus hybridus
Ah.14g084960 Amaranthus hybridus
AL1G28550 Arabidopsis lyrata
AL2G39900 Arabidopsis lyrata
AL2G39910 Arabidopsis lyrata
AL2G39920 Arabidopsis lyrata
AL2G39930 Arabidopsis lyrata
AL2G39950 Arabidopsis lyrata
AL6G13820 Arabidopsis lyrata
Aqoxy1G01381 Aquilegia oxysepala
Aqoxy6G00755 Aquilegia oxysepala
Aqoxy7G01539 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.132YY9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ANJF9J Arachis hypogaea
AT1G16420 Arabidopsis thaliana
AT1G79310 Arabidopsis thaliana
AT1G79320 Arabidopsis thaliana
AT1G79330 Arabidopsis thaliana
AT1G79340 Arabidopsis thaliana
AT5G04200 Arabidopsis thaliana
ATR0794G112 Amborella trichopoda
ATR1096G156 Amborella trichopoda
Atru.chr1.1089 Acer truncatum
Atru.chr1.21 Acer truncatum
Atru.chr10.690 Acer truncatum
Atru.chr10.812 Acer truncatum
Atru.chr10.823 Acer truncatum
AUR62020971 Chenopodium quinoa
AUR62020974 Chenopodium quinoa
AUR62025205 Chenopodium quinoa
AUR62028968 Chenopodium quinoa
AUR62043198 Chenopodium quinoa
AUR62043201 Chenopodium quinoa
BcaB02g07210 Brassica carinata
BcaB02g08680 Brassica carinata
BcaB02g08682 Brassica carinata
BcaB02g08683 Brassica carinata
BcaB04g16969 Brassica carinata
BcaB05g21769 Brassica carinata
BcaB05g25193 Brassica carinata
BcaC03g12951 Brassica carinata
BcaC03g15884 Brassica carinata
BcaC04g22739 Brassica carinata
BcaC06g31921 Brassica carinata
BcaC06g32124 Brassica carinata
BcaC08g45364 Brassica carinata
BcaC08g47494 Brassica carinata
BolC2t06141H Brassica oleracea
BolC2t09651H Brassica oleracea
BolC3t13329H Brassica oleracea
BolC5t31121H Brassica oleracea
BolC5t31123H Brassica oleracea
BolC6t38156H Brassica oleracea
BolC6t40337H Brassica oleracea
BolC6t40339H Brassica oleracea
BolC6t40340H Brassica oleracea
BolC6t40341H Brassica oleracea
BolC8t51993H Brassica oleracea
BolC9t54488H Brassica oleracea
BolC9t60005H Brassica oleracea
BraA02t04804Z Brassica rapa
BraA02t07277Z Brassica rapa
BraA07t30363Z Brassica rapa
BraA07t31948Z Brassica rapa
BraA07t31949Z Brassica rapa
BraA07t31950Z Brassica rapa
BraA07t31951Z Brassica rapa
BraA09t36974Z Brassica rapa
BraA10t45238Z Brassica rapa
C02p01840 Brassica napus
C02p36520 Brassica napus
C05p24040 Brassica napus
C05p24060 Brassica napus
C06p29950 Brassica napus
C06p53190 Brassica napus
C06p53210 Brassica napus
C06p53220 Brassica napus
C06p53230 Brassica napus
C09p15760 Brassica napus
C09p72650 Brassica napus
CAN.G128.126 Capsicum annuum
CAN.G710.30 Capsicum annuum
CANSAT56G0756 Cannabis sativa
CANSAT64G2247 Cannabis sativa
CARHR016890 Cardamine hirsuta
CARHR072960 Cardamine hirsuta
CARHR072970 Cardamine hirsuta
CARHR072980 Cardamine hirsuta
CARHR072990 Cardamine hirsuta
CARHR073000 Cardamine hirsuta
CARHR209060 Cardamine hirsuta
Carub.0001s1616 Capsella rubella
Carub.0002s2616 Capsella rubella
Carub.0002s2617 Capsella rubella
Carub.0002s2618 Capsella rubella
Carub.0002s2619 Capsella rubella
Carub.0002s2620 Capsella rubella
Carub.0006s0315 Capsella rubella
Ca_03188_v3 Cicer arietinum L.
Ca_08330_v3 Cicer arietinum L.
Ca_18732_v3 Cicer arietinum L.
Ca_22975_v3 Cicer arietinum L.
CBR_g12876 Chara braunii
CBR_g12886 Chara braunii
CBR_g12889 Chara braunii
CBR_g12907 Chara braunii
CBR_g12911 Chara braunii
CBR_g12912 Chara braunii
CBR_g24363 Chara braunii
CBR_g30023 Chara braunii
CBR_g38516 Chara braunii
CBR_g6368 Chara braunii
CBR_g6372 Chara braunii
CBR_g6375 Chara braunii
CBR_g81026 Chara braunii
CBR_g81547 Chara braunii
Cc03_g10120 Coffea canephora
Cc03_g10140 Coffea canephora
Cc06_g21200 Coffea canephora
Cc07_g20600 Coffea canephora
CDE01G0582 Ceratophyllum demersum
CDE12G0651 Ceratophyllum demersum
Cfa017766 Carpinus fangiana
Cfa019903 Carpinus fangiana
Ciclev10006644m.g Citrus clementina
Ciclev10012209m.g Citrus clementina
CiPaw.09G161600 Carya illinoinensis
CiPaw.15G111800 Carya illinoinensis
ClCG02G011200 Citrullus lanatus
ClCG04G005030 Citrullus lanatus
COL.COLO4_06029 Corchorus olitorius
COL.COLO4_06030 Corchorus olitorius
COL.COLO4_22319 Corchorus olitorius
COL.COLO4_25002 Corchorus olitorius
Cpa.g.sc32.144 Carica papaya
Cpa.g.sc33.175 Carica papaya
Cre03.g184700 Chlamydomonas reinhardtii
CsaV3_4G028990 Cucumis sativus L.
CsaV3_6G012630 Cucumis sativus L.
CSS0030714 Camellia sinensis var. sinensis
DCAR_009667 Daucus carota
DCAR_013519 Daucus carota
DCAR_019907 Daucus carota
Dinv37305 Davidia involucrata
Dinv40579 Davidia involucrata
Duzib106G0294 Durio zibethinus
Duzib268G1402 Durio zibethinus
ECA234G1641 Erigeron canadensis
ECA234G1827 Erigeron canadensis
ECA234G4157 Erigeron canadensis
ECA236G3306 Erigeron canadensis
ECA248G2318 Erigeron canadensis
EL10Ac3g07371 Beta vulgaris
EL10Ac3g07374 Beta vulgaris
EL10Ac8g19097 Beta vulgaris
Eucgr.A02174 Eucalyptus grandis
Eucgr.F04472 Eucalyptus grandis
FAN11G0792 Fragaria x ananassa
FAN11G1135 Fragaria x ananassa
FAN16G0794 Fragaria x ananassa
FAN21G0824 Fragaria x ananassa
FAN21G3122 Fragaria x ananassa
FAN25G0384 Fragaria x ananassa
FAN25G1026 Fragaria x ananassa
FAN25G2511 Fragaria x ananassa
FvH4_3g13930 Fragaria vesca
FvH4_3g29720 Fragaria vesca
Glyma.08G233300 Glycine max
Glyma.08G233500 Glycine max
Glyma.15G219100 Glycine max
Glyma.19G122300 Glycine max
Gohir.A06G172802 Gossypium hirsutum
Gohir.A06G172806 Gossypium hirsutum
Gohir.A06G172900 Gossypium hirsutum
Gohir.A06G172902 Gossypium hirsutum
Gohir.A06G173700 Gossypium hirsutum
Gohir.A13G126850 Gossypium hirsutum
Gohir.D06G181600 Gossypium hirsutum
Gohir.D06G182000 Gossypium hirsutum
Gohir.D06G182150 Gossypium hirsutum
Gohir.D06G182200 Gossypium hirsutum
Gohir.D06G182300 Gossypium hirsutum
Gohir.D06G182333 Gossypium hirsutum
Gohir.D06G182366 Gossypium hirsutum
Gohir.D06G182400 Gossypium hirsutum
Gohir.D06G182450 Gossypium hirsutum
Gohir.D06G182500 Gossypium hirsutum
Gohir.D06G182566 Gossypium hirsutum
Gohir.D06G183700 Gossypium hirsutum
Gohir.D06G183733 Gossypium hirsutum
Gohir.D13G130500 Gossypium hirsutum
Gorai.010G213000 Gossypium raimondii
Gorai.010G213400 Gossypium raimondii
Gorai.010G213500 Gossypium raimondii
Gorai.010G213600 Gossypium raimondii
Gorai.010G213700 Gossypium raimondii
Gorai.010G213800 Gossypium raimondii
Gorai.010G213900 Gossypium raimondii
Gorai.010G214900 Gossypium raimondii
Gorai.010G215000 Gossypium raimondii
Gorai.013G146600 Gossypium raimondii
GSVIVG01025829001 Vitis vinifera
GSVIVG01036702001 Vitis vinifera
HanXRQChr01g0018051 Helianthus annuus
HanXRQChr06g0182201 Helianthus annuus
HanXRQChr09g0241071 Helianthus annuus
HanXRQChr11g0331721 Helianthus annuus
HanXRQChr16g0520371 Helianthus annuus
Haze_18484 Corylus avellana
Haze_20348 Corylus avellana
Hma1.2p1_0754F.1_g213040 Hydrangea macrophylla
HPP92_001584 Vanilla planifolia
HPP92_001768 Vanilla planifolia
HPP92_011317 Vanilla planifolia
HPP92_015990 Vanilla planifolia
Hund08739 Selenicereus undatus
Hund12038 Selenicereus undatus
Hund24487 Selenicereus undatus
Lalb_Chr03g0031961 Lupinus albus
Lalb_Chr14g0365201 Lupinus albus
Lalb_Chr25g0284241 Lupinus albus
Lalb_Chr25g0284251 Lupinus albus
Lj1g0008220 Lotus japonicus
Lj1g0026160 Lotus japonicus
Lj2C7T6 Lonicera japonica
Lj3g0008765 Lotus japonicus
Lj4A828T49 Lonicera japonica
Lj4g0007280 Lotus japonicus
Lj4g0016021 Lotus japonicus
Lj5g0005260 Lotus japonicus
Lj5g0012243 Lotus japonicus
Lsat_1_v5_gn_1_86281 Lactuca sativa
Lsat_1_v5_gn_4_46521 Lactuca sativa
Lsat_1_v5_gn_4_53480 Lactuca sativa
Lsat_1_v5_gn_6_48320 Lactuca sativa
Lsat_1_v5_gn_8_101661 Lactuca sativa
Manes.15G176200 Manihot esculenta
Manes.15G176224 Manihot esculenta
Manes.16G048900 Manihot esculenta
Manes.S095320 Manihot esculenta
Mapoly0013s0025 Marchantia polymorpha
Mapoly0028s0078 Marchantia polymorpha
Mapoly0035s0080 Marchantia polymorpha
Mapoly0143s0002 Marchantia polymorpha
MBI13_g08644_MAGBIO Magnolia biondii
MBI13_g28782_MAGBIO Magnolia biondii
MBI13_g29623_MAGBIO Magnolia biondii
MBI13_g30253_MAGBIO Magnolia biondii
MBI13_g31584_MAGBIO Magnolia biondii
MBI13_g37144_MAGBIO Magnolia biondii
MBI13_g42913_MAGBIO Magnolia biondii
MBI13_g42914_MAGBIO Magnolia biondii
MBI13_g42915_MAGBIO Magnolia biondii
MBI13_g43866_MAGBIO Magnolia biondii
MBI13_g44206_MAGBIO Magnolia biondii
MBI13_g44209_MAGBIO Magnolia biondii
MBI13_g45946_MAGBIO Magnolia biondii
MBI18_g37375_MAGBIO Magnolia biondii
MD03G1136900 Malus domestica
MD10G1218100 Malus domestica
Medtr0340s0030 Medicago truncatula
Medtr2g063570 Medicago truncatula
Medtr2g063807 Medicago truncatula
Medtr5g049300 Medicago truncatula
Medtr6g086745 Medicago truncatula
Medtr7g088035 Medicago truncatula
Medtr8g010630 Medicago truncatula
Medtr8g447080 Medicago truncatula
MELO3C013563.2 Cucumis melo
MELO3C019168.2 Cucumis melo
Migut.H01652 Erythranthe guttata
Migut.K00191 Erythranthe guttata
Migut.K00193 Erythranthe guttata
Migut.K00195 Erythranthe guttata
Migut.K00196 Erythranthe guttata
Migut.K00198 Erythranthe guttata
Migut.K00206 Erythranthe guttata
Migut.K00207 Erythranthe guttata
Migut.K00208 Erythranthe guttata
Migut.K00209 Erythranthe guttata
Migut.K00210 Erythranthe guttata
Migut.M01495 Erythranthe guttata
MSTRG.26200 Avicennia marina
MSTRG.7099 Avicennia marina
Nitab4.5_0000613g0210 Nicotiana tabacum
Nitab4.5_0003217g0010 Nicotiana tabacum
Nitab4.5_0006630g0010 Nicotiana tabacum
Nitab4.5_0017314g0010 Nicotiana tabacum
Nn3g16237 Nelumbo nucifera
Nn4g26447 Nelumbo nucifera
Nn5g26938 Nelumbo nucifera
Nn6g34141 Nelumbo nucifera
Nn6g34489 Nelumbo nucifera
Nn7g37201 Nelumbo nucifera
Nn7g38413 Nelumbo nucifera
Oeu025994.1 Olea europaea
Oeu032952.2 Olea europaea
Oeu042832.1 Olea europaea
Os01g0799900 Oryza sativa ssp. japonica
Os05g0496400 Oryza sativa ssp. japonica
Os05g0496500 Oryza sativa ssp. japonica
Os11g0134700 Oryza sativa ssp. japonica
Peaxi162Scf00286g00445 Petunia axillaris
Peaxi162Scf00698g00416 Petunia axillaris
PGR031G3914 Punica granatum
PGR042G3174 Punica granatum
PGSC0003DMG400011909 Solanum tuberosum
PGSC0003DMG400028207 Solanum tuberosum
Phvul.001G101400 Phaseolus vulgaris
Phvul.005G046100 Phaseolus vulgaris
Phvul.011G180200 Phaseolus vulgaris
Phvul.011G180300 Phaseolus vulgaris
Potri.006G026500 Populus trichocarpa
Potri.008G081100 Populus trichocarpa
Potri.010G175000 Populus trichocarpa
Potri.016G024500 Populus trichocarpa
Pp3c1_20330 Physcomitrium patens
Pp3c1_20350 Physcomitrium patens
Pp3c21_16610 Physcomitrium patens
Pp3c2_20840 Physcomitrium patens
Pp3c7_23540 Physcomitrium patens
Prupe.4G126000 Prunus persica
Prupe.6G122000 Prunus persica
Psat0s11g0080 Pisum sativum
Psat0s11g0160 Pisum sativum
Psat0ss2585g0280 Pisum sativum
Psat3g083680 Pisum sativum
PSO017G2219 Papaver somniferum
PSO063G3640 Papaver somniferum
PSO170G2397 Papaver somniferum
PSO210G2469 Papaver somniferum
PSO210G7753 Papaver somniferum
PSO675G3833 Papaver somniferum
QL04p010765 Quercus lobata
QL04p010778 Quercus lobata
QL04p095775 Quercus lobata
QL04p095794 Quercus lobata
QL07p015400 Quercus lobata
RcHm_v2.0_Chr5g0023131 Rosa chinensis
RcHm_v2.0_Chr5g0023141 Rosa chinensis
RcHm_v2.0_Chr5g0055101 Rosa chinensis
Rhsim04G0003600 Rhododendron simsii
Rhsim04G0135200 Rhododendron simsii
Sabra06G0019600 Salix brachista
Sabra08G0060400 Salix brachista
Sabra10G0134800 Salix brachista
Sabra16G0030400 Salix brachista
SalBow1G0836 Salvia bowleyana
SalBow1G2009 Salvia bowleyana
SalBow1G2623 Salvia bowleyana
SalBow1G2925 Salvia bowleyana
SalBow1G8233 Salvia bowleyana
Sc02g0005340 Simmondsia chinensis
Sc13g0000720 Simmondsia chinensis
Sc14g0000580 Simmondsia chinensis
Sc14g0000590 Simmondsia chinensis
Sc19g0007800 Simmondsia chinensis
Sed0007782 Sechium edule
Sed0009784 Sechium edule
SEGI_00410 Sequoiadendron giganteum
SEGI_02044 Sequoiadendron giganteum
SEGI_02619 Sequoiadendron giganteum
SEGI_03079 Sequoiadendron giganteum
SEGI_06663 Sequoiadendron giganteum
SEGI_12722 Sequoiadendron giganteum
SEGI_15007 Sequoiadendron giganteum
SEGI_16717 Sequoiadendron giganteum
SEGI_19584 Sequoiadendron giganteum
SEGI_20691 Sequoiadendron giganteum
SEGI_30564 Sequoiadendron giganteum
SEGI_38757 Sequoiadendron giganteum
SGA_v2.0_scaffold123G33484 Striga asiatica
SGA_v2.0_scaffold123G33488 Striga asiatica
SGA_v2.0_scaffold123G33491 Striga asiatica
SGA_v2.0_scaffold186G40167 Striga asiatica
SGA_v2.0_scaffold26G11262 Striga asiatica
SGA_v2.0_scaffold7G03632 Striga asiatica
SMO115G0231 Selaginella moellendorffii
SMO166G0054 Selaginella moellendorffii
Solyc09g098150.3 Solanum lycopersicum
Solyc10g081300.1 Solanum lycopersicum
Sopen09g036100 Solanum pennellii
Sopen10g031800 Solanum pennellii
Sp1g14570 Schrenkiella parvula
Sp1g29540 Schrenkiella parvula
Sp2g01670 Schrenkiella parvula
Sp5g34380 Schrenkiella parvula
Sp5g34390 Schrenkiella parvula
Sp5g34400 Schrenkiella parvula
Sp6g38550 Schrenkiella parvula
Sp7g12170 Schrenkiella parvula
TAR623G1069 Trochodendron aralioides
TAR626G0305 Trochodendron aralioides
TAR636G2200 Trochodendron aralioides
THA.LOC104808147 Tarenaya hassleriana
THA.LOC104812395 Tarenaya hassleriana
THA.LOC104812396 Tarenaya hassleriana
THA.LOC104826893 Tarenaya hassleriana
Thecc.07G189400 Theobroma cacao
Thecc.10G138200 Theobroma cacao
Thecc.10G138400 Theobroma cacao
Thhalv10007917m.g Eutrema salsugineum
Thhalv10014106m.g Eutrema salsugineum
Thhalv10018618m.g Eutrema salsugineum
Thhalv10018629m.g Eutrema salsugineum
Thhalv10018721m.g Eutrema salsugineum
TPR.G23054 Trifolium pratense
TPR.G23692 Trifolium pratense
TPR.G25304 Trifolium pratense
TPR.G30142 Trifolium pratense
TPR.G33534 Trifolium pratense
TPR.G34967 Trifolium pratense
TPR.G3602 Trifolium pratense
TPR.G37101 Trifolium pratense
TWI38G1380 Tripterygium wilfordii
TWI38G1819 Tripterygium wilfordii
TWI53G1578 Tripterygium wilfordii
unitig_32.g11073 Utricularia gibba
unitig_748.g7853 Utricularia gibba
vmacro08820 Vaccinium macrocarpon
vmacro08821 Vaccinium macrocarpon
vmacro09763 Vaccinium macrocarpon
VMungo1080G1711 Vigna mungo
VMungo1127G0819 Vigna mungo
VMungo1127G2030 Vigna mungo
VMungo1383G2405 Vigna mungo
Zm00001eb150730 Zea mays
Zm00001eb196150 Zea mays
Zm00001eb349620 Zea mays
Zm00001eb352560 Zea mays

User provided reference genes

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