Gene: AT1G79340
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G79340
- Transcript Identifier AT1G79340.1
- Gene Type Coding gene
- Location Chr1 : 29842849-29844368 : positive
Gene Family Information
- ID HOM05D001389
- #Genes/#Species 451/97
- Phylogenetic origin
- ID ORTHO05D002892
- #Genes/#Species 256/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G79340.1
- symbol MC4
- Alias AtMC4,metacaspase 4,AtMCP2d,metacaspase 2d,MCP2d,metacaspase 2d
- uniprot O64517
Descriptions
- Description metacaspase 4
- Computational description metacaspase 4 (MC4); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 5 (TAIR:AT1G79330.1); Has 1195 Blast hits to 1161 proteins in 285 species: Archae - 6; Bacteria - 340; Metazoa - 3; Fungi - 271; Plants - 332; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0043068 | IDA, IMP | Gene Ontology | positive regulation of programmed cell death | 1 2 |
| GO:0016540 | IDA | Gene Ontology | protein autoprocessing | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0008234 | IEA | GOA Database | cysteine-type peptidase activity | |
| GO:0008234 | IDA | Gene Ontology | cysteine-type peptidase activity | 3 |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0042802 | IPI | Gene Ontology | identical protein binding | 1 |
| GO:0004197 | IDA | Gene Ontology | cysteine-type endopeptidase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0005829 | IDA, HDA | Gene Ontology | cytosol | 2 4 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 2 |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 5 |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 6 |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 7 |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029030 | Caspase-like domain superfamily |
| Mapman id | Description |
|---|---|
| 27.2.4.3 | Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP2) |