Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.09g233270 Amaranthus hybridus
Ah.10g027650 Amaranthus hybridus
Ah.10g027750 Amaranthus hybridus
AL96U10030 Arabidopsis lyrata
Aqoxy6G02207 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0R479N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNS64L Arachis hypogaea
ATCG00020 Arabidopsis thaliana
Atru.chr6.2862 Acer truncatum
Atru.chr6.756 Acer truncatum
AUR62026194 Chenopodium quinoa
AUR62033892 Chenopodium quinoa
AUR62037881 Chenopodium quinoa
AUR62041350 Chenopodium quinoa
AUR62041412 Chenopodium quinoa
AUR62041555 Chenopodium quinoa
AUR62042342 Chenopodium quinoa
AUR62043344 Chenopodium quinoa
AUR62043905 Chenopodium quinoa
AUR62044034 Chenopodium quinoa
AUR62044558 Chenopodium quinoa
BcaC05g28806 Brassica carinata
BolC2t10579H Brassica oleracea
BolSC29t60443H Brassica oleracea
BolSC29t60521H Brassica oleracea
BolSC29t60566H Brassica oleracea
BolSC37t60778H Brassica oleracea
BolSC45t60886H Brassica oleracea
BolSC45t60928H Brassica oleracea
BolSC46t60977H Brassica oleracea
BolSC49t61207H Brassica oleracea
BraSC143t45675Z Brassica rapa
BraSC179t45789Z Brassica rapa
BraSC58t46473Z Brassica rapa
BraSC59t46520Z Brassica rapa
C06p21380 Brassica napus
CAN.G100.38 Capsicum annuum
CAN.G1103.5 Capsicum annuum
CAN.G139.6 Capsicum annuum
CAN.G169.15 Capsicum annuum
CAN.G1738.13 Capsicum annuum
CAN.G27.52 Capsicum annuum
CAN.G308.35 Capsicum annuum
CAN.G386.23 Capsicum annuum
CAN.G390.14 Capsicum annuum
CAN.G398.15 Capsicum annuum
CAN.G413.2 Capsicum annuum
CAN.G413.4 Capsicum annuum
CAN.G63.19 Capsicum annuum
CAN.G673.3 Capsicum annuum
CAN.G678.11 Capsicum annuum
CAN.G724.23 Capsicum annuum
CAN.G822.3 Capsicum annuum
CAN.G844.4 Capsicum annuum
CAN.G85.7 Capsicum annuum
CARHR281830 Cardamine hirsuta
Carub.0002s0976 Capsella rubella
Cc06_g16210 Coffea canephora
CDE02G0488 Ceratophyllum demersum
Ciclev10023978m.g Citrus clementina
ClCG00G002330 Citrullus lanatus
ClCG07G009460 Citrullus lanatus
COL.COLO4_00423 Corchorus olitorius
COL.COLO4_00599 Corchorus olitorius
COL.COLO4_00825 Corchorus olitorius
COL.COLO4_01579 Corchorus olitorius
COL.COLO4_01810 Corchorus olitorius
COL.COLO4_02355 Corchorus olitorius
COL.COLO4_02625 Corchorus olitorius
COL.COLO4_03170 Corchorus olitorius
Cpa.g.c40297 Carica papaya
Cpa.g.sc3.388 Carica papaya
Cpa.g.sc669.3 Carica papaya
CsaV3_1G025480 Cucumis sativus L.
DCAR_020103 Daucus carota
DCAR_028578 Daucus carota
DCAR_028684 Daucus carota
DCAR_032464 Daucus carota
Dinv39829 Davidia involucrata
ECA169G0001 Erigeron canadensis
EL10Ac2g04316 Beta vulgaris
EL10Ac3g06361 Beta vulgaris
EL10Ac4g10180 Beta vulgaris
EL10Ac9g22724 Beta vulgaris
EL10As12g24013 Beta vulgaris
EL10As2g23209 Beta vulgaris
Eucgr.K02067 Eucalyptus grandis
Glyma.13G028200 Glycine max
Gohir.1Z049966 Gossypium hirsutum
Gohir.1Z050192 Gossypium hirsutum
Gohir.A04G039105 Gossypium hirsutum
Gohir.A04G119250 Gossypium hirsutum
Gohir.A07G157905 Gossypium hirsutum
Gohir.A08G102600 Gossypium hirsutum
Gohir.D04G121450 Gossypium hirsutum
Gohir.D04G160866 Gossypium hirsutum
Gohir.D04G169466 Gossypium hirsutum
Gohir.D06G072250 Gossypium hirsutum
Gohir.D06G081550 Gossypium hirsutum
Gohir.D07G190750 Gossypium hirsutum
Gohir.D09G116850 Gossypium hirsutum
Gorai.001G213000 Gossypium raimondii
Gorai.002G146600 Gossypium raimondii
Gorai.002G165800 Gossypium raimondii
Gorai.004G062200 Gossypium raimondii
Gorai.006G135200 Gossypium raimondii
Gorai.008G126600 Gossypium raimondii
Gorai.010G094900 Gossypium raimondii
Gorai.012G103900 Gossypium raimondii
Gorai.012G148800 Gossypium raimondii
Gorai.012G157700 Gossypium raimondii
GSVIVG01016441001 Vitis vinifera
GSVIVG01030207001 Vitis vinifera
HanXRQChr00c0126g0571821 Helianthus annuus
HanXRQChr00c0165g0572191 Helianthus annuus
HanXRQChr00c0368g0574171 Helianthus annuus
HanXRQChr00c0434g0574691 Helianthus annuus
HanXRQChr00c0434g0574701 Helianthus annuus
HanXRQChr00c0451g0574841 Helianthus annuus
HanXRQChr00c0454g0574931 Helianthus annuus
HanXRQChr00c0496g0575181 Helianthus annuus
HanXRQChr00c0496g0575191 Helianthus annuus
HanXRQChr00c0509g0575351 Helianthus annuus
HanXRQChr00c0512g0575361 Helianthus annuus
HanXRQChr00c0524g0575441 Helianthus annuus
HanXRQChr00c0554g0575691 Helianthus annuus
HanXRQChr00c0554g0575701 Helianthus annuus
HanXRQChr00c0572g0575941 Helianthus annuus
HanXRQChr00c0585g0576291 Helianthus annuus
HanXRQChr00c0634g0576621 Helianthus annuus
HanXRQChr00c0838g0577641 Helianthus annuus
HanXRQChr03g0073601 Helianthus annuus
HanXRQChr04g0107771 Helianthus annuus
HanXRQChr08g0227011 Helianthus annuus
HanXRQChr08g0227021 Helianthus annuus
HanXRQChr08g0227761 Helianthus annuus
HanXRQChr09g0257281 Helianthus annuus
HanXRQChr11g0326571 Helianthus annuus
HanXRQChr11g0327051 Helianthus annuus
HanXRQChr14g0460081 Helianthus annuus
HanXRQChr16g0503941 Helianthus annuus
HanXRQCPg0579731 Helianthus annuus
Hma1.2p1_0036F.1_g022830 Hydrangea macrophylla
Hma1.2p1_4210F.1_g338460 Hydrangea macrophylla
HPP92_007194 Vanilla planifolia
HPP92_028389 Vanilla planifolia
HPP92_028439 Vanilla planifolia
Hund01215 Selenicereus undatus
Hund01864 Selenicereus undatus
Hund03967 Selenicereus undatus
Hund04062 Selenicereus undatus
Hund07986 Selenicereus undatus
Hund08202 Selenicereus undatus
Hund08797 Selenicereus undatus
Hund08844 Selenicereus undatus
Hund10281 Selenicereus undatus
Hund11179 Selenicereus undatus
Hund12719 Selenicereus undatus
Hund12846 Selenicereus undatus
Hund19324 Selenicereus undatus
Hund22543 Selenicereus undatus
Hund22778 Selenicereus undatus
Hund23971 Selenicereus undatus
Hund25910 Selenicereus undatus
Hund26850 Selenicereus undatus
Hund26896 Selenicereus undatus
Hund27457 Selenicereus undatus
Hund27471 Selenicereus undatus
Hund27474 Selenicereus undatus
Hund27637 Selenicereus undatus
Hund27649 Selenicereus undatus
Hund27675 Selenicereus undatus
Hund27694 Selenicereus undatus
Hund27739 Selenicereus undatus
Hund27811 Selenicereus undatus
Hund27827 Selenicereus undatus
Hund27836 Selenicereus undatus
Hund27861 Selenicereus undatus
Hund27880 Selenicereus undatus
Hund27887 Selenicereus undatus
Hund27934 Selenicereus undatus
Hund27949 Selenicereus undatus
Hund27969 Selenicereus undatus
Hund27990 Selenicereus undatus
Hund28040 Selenicereus undatus
Hund28126 Selenicereus undatus
Hund28174 Selenicereus undatus
Hund28255 Selenicereus undatus
Hund28273 Selenicereus undatus
Hund28319 Selenicereus undatus
Hund28327 Selenicereus undatus
Hund28433 Selenicereus undatus
Hund28534 Selenicereus undatus
Hund28542 Selenicereus undatus
Hund28592 Selenicereus undatus
Hund28593 Selenicereus undatus
Hund28600 Selenicereus undatus
Hund28608 Selenicereus undatus
Hund28647 Selenicereus undatus
Hund28773 Selenicereus undatus
Hund28797 Selenicereus undatus
Hund28877 Selenicereus undatus
Hund28900 Selenicereus undatus
Hund28909 Selenicereus undatus
Hund28968 Selenicereus undatus
Hund28987 Selenicereus undatus
Hund28991 Selenicereus undatus
Hund28994 Selenicereus undatus
Hund29004 Selenicereus undatus
Hund29046 Selenicereus undatus
Hund29065 Selenicereus undatus
Hund29120 Selenicereus undatus
Hund29151 Selenicereus undatus
Hund29157 Selenicereus undatus
Hund29202 Selenicereus undatus
Hund29223 Selenicereus undatus
Hund29237 Selenicereus undatus
Hund29259 Selenicereus undatus
Hund29265 Selenicereus undatus
Hund29269 Selenicereus undatus
Hund29293 Selenicereus undatus
Hund29296 Selenicereus undatus
Hund29299 Selenicereus undatus
Hund29302 Selenicereus undatus
Hund29305 Selenicereus undatus
Hund29308 Selenicereus undatus
Hund29321 Selenicereus undatus
Hund29326 Selenicereus undatus
Hund29330 Selenicereus undatus
Hund29347 Selenicereus undatus
Hund29357 Selenicereus undatus
Hund29382 Selenicereus undatus
Hund29399 Selenicereus undatus
Hund29404 Selenicereus undatus
Hund29422 Selenicereus undatus
Hund29424 Selenicereus undatus
Hund29444 Selenicereus undatus
Hund29468 Selenicereus undatus
Hund29472 Selenicereus undatus
Hund29474 Selenicereus undatus
Hund29489 Selenicereus undatus
Hund29521 Selenicereus undatus
Hund29649 Selenicereus undatus
Hund29651 Selenicereus undatus
Hund29660 Selenicereus undatus
Hund29687 Selenicereus undatus
Hund29697 Selenicereus undatus
Hund29736 Selenicereus undatus
Hund29748 Selenicereus undatus
Hund29774 Selenicereus undatus
Hund29850 Selenicereus undatus
Hund29889 Selenicereus undatus
Hund29924 Selenicereus undatus
Hund29927 Selenicereus undatus
Hund29964 Selenicereus undatus
Hund30055 Selenicereus undatus
Hund30058 Selenicereus undatus
Hund30061 Selenicereus undatus
Hund30112 Selenicereus undatus
Hund30156 Selenicereus undatus
Hund31517 Selenicereus undatus
Lalb_Chr07g0191561 Lupinus albus
Lalb_Chr07g0191571 Lupinus albus
Lalb_Chr07g0192011 Lupinus albus
Lalb_Chr07g0192611 Lupinus albus
Lalb_Chr19g0124791 Lupinus albus
Lalb_Chr19g0124801 Lupinus albus
Lalb_Chr24g0400811 Lupinus albus
Lj2C1238T12 Lonicera japonica
Lj2C1239T49 Lonicera japonica
Lj2g0028184 Lotus japonicus
Lj4A239T49 Lonicera japonica
Lj4g0010072 Lotus japonicus
Lj5P197T58 Lonicera japonica
LjContig00318g0000610 Lotus japonicus
LjContig00489g0024629 Lotus japonicus
Lsat_1_v5_gn_3_104200 Lactuca sativa
Lsat_1_v5_gn_4_51841 Lactuca sativa
Lsat_1_v5_gn_4_5440 Lactuca sativa
Lsat_1_v5_gn_6_116481 Lactuca sativa
Lsat_1_v5_gn_7_82620 Lactuca sativa
Lsat_1_v5_gn_8_133980 Lactuca sativa
Mapoly0050s0058 Marchantia polymorpha
Mapoly0064s0002 Marchantia polymorpha
Mapoly0093s0016 Marchantia polymorpha
Mapoly0093s0017 Marchantia polymorpha
Mapoly0096s0010 Marchantia polymorpha
Medtr0002s0380 Medicago truncatula
Medtr1g057280 Medicago truncatula
Medtr1g086380 Medicago truncatula
Medtr2g089580 Medicago truncatula
Medtr3g088450 Medicago truncatula
Medtr4g006190 Medicago truncatula
Medtr4g050770 Medicago truncatula
Medtr4g051290 Medicago truncatula
Medtr7g017540 Medicago truncatula
Medtr7g021750 Medicago truncatula
MELO3C000428.2 Cucumis melo
MELO3C015542.2 Cucumis melo
MELO3C015624.2 Cucumis melo
MELO3C025247.2 Cucumis melo
MELO3C027714.2 Cucumis melo
MELO3C031641.2 Cucumis melo
MELO3C034841.2 Cucumis melo
MELO3C035263.2 Cucumis melo
MELO3C035268.2 Cucumis melo
MELO3C035709.2 Cucumis melo
Migut.B01001 Erythranthe guttata
Migut.D01407 Erythranthe guttata
Nitab4.5_0000460g0030 Nicotiana tabacum
Nitab4.5_0001439g0110 Nicotiana tabacum
Nitab4.5_0001676g0070 Nicotiana tabacum
Nitab4.5_0001761g0230 Nicotiana tabacum
Nitab4.5_0002302g0050 Nicotiana tabacum
Nitab4.5_0002446g0040 Nicotiana tabacum
Nitab4.5_0002446g0060 Nicotiana tabacum
Nitab4.5_0003961g0020 Nicotiana tabacum
Nitab4.5_0004362g0060 Nicotiana tabacum
Nitab4.5_0007979g0030 Nicotiana tabacum
Nitab4.5_0008665g0010 Nicotiana tabacum
Nitab4.5_0009334g0020 Nicotiana tabacum
Nitab4.5_0011952g0020 Nicotiana tabacum
Nn020s41489 Nelumbo nucifera
Nn1g05091 Nelumbo nucifera
Nn3g16149 Nelumbo nucifera
Oeu001811.1 Olea europaea
Oeu008590.1 Olea europaea
Oeu010685.1 Olea europaea
Oeu012780.1 Olea europaea
Oeu022564.2 Olea europaea
Oeu022571.1 Olea europaea
Oeu028760.1 Olea europaea
Oeu037600.1 Olea europaea
Oeu041084.1 Olea europaea
Oeu059002.1 Olea europaea
Os04g0473150 Oryza sativa ssp. japonica
Peaxi162Scf00007g00035 Petunia axillaris
Peaxi162Scf00007g00418 Petunia axillaris
Peaxi162Scf00064g00813 Petunia axillaris
Peaxi162Scf00211g00222 Petunia axillaris
Peaxi162Scf00217g00112 Petunia axillaris
Peaxi162Scf00376g00211 Petunia axillaris
PGR111G0088 Punica granatum
PGSC0003DMG400001972 Solanum tuberosum
PGSC0003DMG400004211 Solanum tuberosum
PGSC0003DMG400015861 Solanum tuberosum
PGSC0003DMG400017848 Solanum tuberosum
PGSC0003DMG400044366 Solanum tuberosum
Phvul.009G011900 Phaseolus vulgaris
Phvul.009G224400 Phaseolus vulgaris
Potri.005G154836 Populus trichocarpa
Potri.013G138300 Populus trichocarpa
Psat0s410g0160 Pisum sativum
Psat0s5127g0080 Pisum sativum
Psat0s6638g0040 Pisum sativum
Psat0s8829g0040 Pisum sativum
Psat0ss8367g0080 Pisum sativum
Psat0ss8367g0160 Pisum sativum
Psat1g042000 Pisum sativum
Psat2g097040 Pisum sativum
Psat3g186520 Pisum sativum
Psat3g186560 Pisum sativum
Psat4g065320 Pisum sativum
PSO548G0048 Papaver somniferum
QL02p008304 Quercus lobata
QL93p0276_0008 Quercus lobata
QL93p1098_0003 Quercus lobata
RcHm_v2.0_Chr1g0354591 Rosa chinensis
RcHm_v2.0_Chr4g0432801 Rosa chinensis
RcHm_v2.0_Chr7g0221101 Rosa chinensis
RcHm_v2.0_CPg0502541 Rosa chinensis
RhsimPtG0005800 Rhododendron simsii
Sabra10G0056000 Salix brachista
SabraMtG0003000 Salix brachista
SabraPtG0000200 Salix brachista
SalBow1G0415 Salvia bowleyana
Sc04g0005020 Simmondsia chinensis
Sc05g0004120 Simmondsia chinensis
Sc07g0006610 Simmondsia chinensis
Sc12g0007850 Simmondsia chinensis
Sc13g0006990 Simmondsia chinensis
Sc15g0001780 Simmondsia chinensis
Sc20g0004280 Simmondsia chinensis
Sc21g0003650 Simmondsia chinensis
ScUNg0000580 Simmondsia chinensis
ScUNg0001300 Simmondsia chinensis
Sed0000669 Sechium edule
Sed0016615 Sechium edule
Sed0019209 Sechium edule
Sed0020979 Sechium edule
SEGI_01267 Sequoiadendron giganteum
SEGI_16404 Sequoiadendron giganteum
SEGI_18653 Sequoiadendron giganteum
SEGI_21119 Sequoiadendron giganteum
SEGI_21210 Sequoiadendron giganteum
SEGI_23988 Sequoiadendron giganteum
SEGI_24100 Sequoiadendron giganteum
SEGI_38535 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09549 Striga asiatica
SGA_v2.0_scaffold479G52249 Striga asiatica
SHI38119 Sapria himalayana
SMO086G0002 Selaginella moellendorffii
SMO267G0002 Selaginella moellendorffii
SMO324G0001 Selaginella moellendorffii
Solyc00g277510.1 Solanum lycopersicum
Solyc00g500130.1 Solanum lycopersicum
Solyc00g500200.1 Solanum lycopersicum
Solyc00g500296.1 Solanum lycopersicum
Solyc00g500329.1 Solanum lycopersicum
Solyc01g097530.3 Solanum lycopersicum
Solyc02g011990.1 Solanum lycopersicum
Solyc02g021290.1 Solanum lycopersicum
Solyc03g013500.1 Solanum lycopersicum
Solyc05g016120.2 Solanum lycopersicum
Solyc11g013780.1 Solanum lycopersicum
Solyc11g030830.1 Solanum lycopersicum
Solyc12g039030.1 Solanum lycopersicum
Sopen01g008050 Solanum pennellii
Sopen02g002740 Solanum pennellii
TAR375G0810 Trochodendron aralioides
Thhalv10001821m.g Eutrema salsugineum
Thhalv10002847m.g Eutrema salsugineum
Thhalv10012367m.g Eutrema salsugineum
Thhalv10028093m.g Eutrema salsugineum
TPR.G23019 Trifolium pratense
TPR.G3045 Trifolium pratense
TWI09G1308 Tripterygium wilfordii
TWI34G1169 Tripterygium wilfordii
unitig_87.g27974 Utricularia gibba
unitig_91.g26491 Utricularia gibba
unitig_91.g26532 Utricularia gibba
vmacro22397 Vaccinium macrocarpon
vmacro22415 Vaccinium macrocarpon
vmacro22422 Vaccinium macrocarpon
VMungo0498G0003 Vigna mungo
Zm00001eb255930 Zea mays
Zm00001eb380730 Zea mays
Zm00001eb419650 Zea mays
Zm00001eb435340 Zea mays
Zm00001eb435620 Zea mays
Zm00001eb435820 Zea mays
Zm00001eb436890 Zea mays
Zm00001eb437100 Zea mays
Zm00001eb437310 Zea mays
Zm00001eb437730 Zea mays
Zm00001eb437750 Zea mays
Zm00001eb438280 Zea mays
Zm00001eb438290 Zea mays
Zm00001eb439910 Zea mays
Zm00001eb441810 Zea mays
Zm00001eb441950 Zea mays
Zm00001eb442710 Zea mays
Zm00001eb442990 Zea mays

User provided reference genes

Program Settings