Gene: SEGI_24100

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_24100
  • Transcript Identifier SEGI_24100.1
  • Gene Type Coding gene
  • Location chr5 : 19782195-19785281 : negative

Gene Family Information

  • ID HOM05D001387
  • #Genes/#Species 453/74
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_24100.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019684
IEA
InterProphotosynthesis, light reaction
GO:0009772
IEA
InterProphotosynthetic electron transport in photosystem II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
ISO
PLAZA Integrative Orthologychlorophyll binding ATCG00020
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00020
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00020
GO:0008137
IEA
InterProNADH dehydrogenase (ubiquinone) activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0009055
IEA
InterProelectron transfer activity
GO:0045156
IEA
InterProelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0048038
IEA
InterProquinone binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00020
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00020
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00020
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00020
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00020
GO:0009523
ISO
PLAZA Integrative Orthologyphotosystem II ATCG00020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit
IPR000484 Photosynthetic reaction centre, L/M
IPR005867 Photosystem II protein D1
IPR036854 Photosystem II protein D1/D2 superfamily
IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Mapman id Description
1.1.1.2.1.1 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.component D1/PsbA
1.1.8.1.2.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhK