Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11180 Brassica napus
A03p15270 Brassica napus
A03p25570 Brassica napus
A04p00990 Brassica napus
A05p01460 Brassica napus
A06p34940 Brassica napus
A09p06620 Brassica napus
A10p10780 Brassica napus
Aa31LG10G15620 Aethionema arabicum
Aa31LG1G27700 Aethionema arabicum
Aa31LG3G9260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.409 Anthoceros agrestis
Actinidia02805 Actinidia chinensis
Actinidia20196 Actinidia chinensis
Actinidia27339 Actinidia chinensis
Actinidia28493 Actinidia chinensis
AL4G45630 Arabidopsis lyrata
AL5G44040 Arabidopsis lyrata
AL6G35460 Arabidopsis lyrata
AL8G27900 Arabidopsis lyrata
Aqoxy5G04117 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BHK1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.246EX0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.29029X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57RBBI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0IVK2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JZQU6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6VBPA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3QZI5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XBFI6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9NP63 Arachis hypogaea
AT2G46330 Arabidopsis thaliana
AT3G61640 Arabidopsis thaliana
AT5G24105 Arabidopsis thaliana
AT5G53250 Arabidopsis thaliana
Atru.chr1.270 Acer truncatum
Atru.chr5.621 Acer truncatum
Atru.chr7.1336 Acer truncatum
BcaB01g03224 Brassica carinata
BcaB01g03227 Brassica carinata
BcaB01g03229 Brassica carinata
BcaB01g04237 Brassica carinata
BcaB02g08150 Brassica carinata
BcaB05g22027 Brassica carinata
BcaB08g35687 Brassica carinata
BcaC01g05077 Brassica carinata
BcaC01g05082 Brassica carinata
BcaC01g06232 Brassica carinata
BcaC01g06233 Brassica carinata
BcaC02g10241 Brassica carinata
BcaC02g12698 Brassica carinata
BcaC02g12816 Brassica carinata
BcaC03g14439 Brassica carinata
BcaC04g20479 Brassica carinata
BcaC04g23523 Brassica carinata
BcaNung01209 Brassica carinata
BolC2t07993H Brassica oleracea
BolC3t14192H Brassica oleracea
BolC3t15399H Brassica oleracea
BolC4t21817H Brassica oleracea
BolC4t24669H Brassica oleracea
BolC7t44888H Brassica oleracea
BolC9t53653H Brassica oleracea
BolC9t57176H Brassica oleracea
BraA02t06181Z Brassica rapa
BraA03t10820Z Brassica rapa
BraA03t11773Z Brassica rapa
BraA04t15816Z Brassica rapa
BraA05t19143Z Brassica rapa
BraA06t26418Z Brassica rapa
BraA09t36309Z Brassica rapa
BraA10t43159Z Brassica rapa
C02p18530 Brassica napus
C03p17850 Brassica napus
C03p30500 Brassica napus
C04p01650 Brassica napus
C04p31180 Brassica napus
C07p43610 Brassica napus
C09p07390 Brassica napus
C09p43060 Brassica napus
CAN.G1710.1 Capsicum annuum
CAN.G532.91 Capsicum annuum
CAN.G792.67 Capsicum annuum
CAN.G986.43 Capsicum annuum
CANSAT21G1401 Cannabis sativa
CANSAT56G0949 Cannabis sativa
CARHR141610 Cardamine hirsuta
CARHR189480 Cardamine hirsuta
CARHR266300 Cardamine hirsuta
Carub.0004s2903 Capsella rubella
Carub.0005s2833 Capsella rubella
Carub.0006s2183 Capsella rubella
Carub.0008s1343 Capsella rubella
Ca_17497_v3 Cicer arietinum L.
Cc02_g01910 Coffea canephora
Cc02_g38960 Coffea canephora
Cc06_g09580 Coffea canephora
Cc06_g10880 Coffea canephora
Cc08_g15710 Coffea canephora
CDE02G0411 Ceratophyllum demersum
CDE02G4026 Ceratophyllum demersum
CDE03G0448 Ceratophyllum demersum
CDE08G0321 Ceratophyllum demersum
CDE09G1367 Ceratophyllum demersum
Cfa003142 Carpinus fangiana
Cfa003266 Carpinus fangiana
Cfa003834 Carpinus fangiana
Cfa012851 Carpinus fangiana
Ciclev10010340m.g Citrus clementina
Ciclev10023159m.g Citrus clementina
Ciclev10023364m.g Citrus clementina
CiPaw.01G072100 Carya illinoinensis
CiPaw.03G220500 Carya illinoinensis
CiPaw.03G233000 Carya illinoinensis
CiPaw.04G153700 Carya illinoinensis
CiPaw.05G258000 Carya illinoinensis
CiPaw.11G124600 Carya illinoinensis
ClCG01G002070 Citrullus lanatus
ClCG05G001090 Citrullus lanatus
ClCG05G008690 Citrullus lanatus
ClCG07G014860 Citrullus lanatus
ClCG11G002500 Citrullus lanatus
COL.COLO4_06332 Corchorus olitorius
COL.COLO4_18260 Corchorus olitorius
COL.COLO4_21727 Corchorus olitorius
COL.COLO4_34907 Corchorus olitorius
COL.COLO4_35659 Corchorus olitorius
Cpa.g.sc194.9 Carica papaya
Cpa.g.sc2328.2 Carica papaya
Cpa.g.sc3.48 Carica papaya
CsaV3_2G002300 Cucumis sativus L.
CsaV3_3G008420 Cucumis sativus L.
CsaV3_3G021920 Cucumis sativus L.
CsaV3_4G006390 Cucumis sativus L.
CsaV3_5G002200 Cucumis sativus L.
CSS0002673 Camellia sinensis var. sinensis
CSS0003232 Camellia sinensis var. sinensis
CSS0021424 Camellia sinensis var. sinensis
CSS0028432 Camellia sinensis var. sinensis
CSS0049312 Camellia sinensis var. sinensis
DCAR_006964 Daucus carota
DCAR_010686 Daucus carota
DCAR_012014 Daucus carota
DCAR_028719 Daucus carota
Dinv32554 Davidia involucrata
Dinv37556 Davidia involucrata
Dinv43894 Davidia involucrata
Duzib068G0580 Durio zibethinus
Duzib084G1120 Durio zibethinus
Duzib133G0751 Durio zibethinus
Duzib138G1328 Durio zibethinus
Duzib205G1079 Durio zibethinus
Duzib205G1630 Durio zibethinus
ECA236G1259 Erigeron canadensis
EL10Ac3g05350 Beta vulgaris
EL10Ac8g18508 Beta vulgaris
Eucgr.C01051 Eucalyptus grandis
Eucgr.C03697 Eucalyptus grandis
Eucgr.C03852 Eucalyptus grandis
FAN01G1051 Fragaria x ananassa
FAN03G0436 Fragaria x ananassa
FAN06G1205 Fragaria x ananassa
FAN06G2635 Fragaria x ananassa
FAN06G2829 Fragaria x ananassa
FAN06G3780 Fragaria x ananassa
FAN10G1694 Fragaria x ananassa
FAN10G2526 Fragaria x ananassa
FAN10G2635 Fragaria x ananassa
FAN10G3769 Fragaria x ananassa
FAN19G2390 Fragaria x ananassa
FAN23G2194 Fragaria x ananassa
FAN23G3069 Fragaria x ananassa
FAN26G0268 Fragaria x ananassa
FAN28G1521 Fragaria x ananassa
FAN28G2867 Fragaria x ananassa
FvH4_1g05040 Fragaria vesca
FvH4_1g06710 Fragaria vesca
FvH4_7g15910 Fragaria vesca
FvH4_7g30990 Fragaria vesca
Glyma.01G004600 Glycine max
Glyma.01G224150 Glycine max
Glyma.03G255700 Glycine max
Glyma.04G238500 Glycine max
Glyma.05G214851 Glycine max
Glyma.06G125300 Glycine max
Glyma.07G087200 Glycine max
Glyma.07G127200 Glycine max
Glyma.08G021100 Glycine max
Glyma.09G189700 Glycine max
Glyma.11G018900 Glycine max
Glyma.13G041100 Glycine max
Glyma.14G161000 Glycine max
Gohir.A05G022600 Gossypium hirsutum
Gohir.A06G061600 Gossypium hirsutum
Gohir.A06G069900 Gossypium hirsutum
Gohir.A07G139600 Gossypium hirsutum
Gohir.A08G240900 Gossypium hirsutum
Gohir.A10G068700 Gossypium hirsutum
Gohir.A10G199650 Gossypium hirsutum
Gohir.A11G023800 Gossypium hirsutum
Gohir.A11G094700 Gossypium hirsutum
Gohir.A11G210500 Gossypium hirsutum
Gohir.A12G110700 Gossypium hirsutum
Gohir.A12G234600 Gossypium hirsutum
Gohir.D05G024100 Gossypium hirsutum
Gohir.D06G059900 Gossypium hirsutum
Gohir.D06G068500 Gossypium hirsutum
Gohir.D07G144700 Gossypium hirsutum
Gohir.D08G132700 Gossypium hirsutum
Gohir.D08G261600 Gossypium hirsutum
Gohir.D11G023500 Gossypium hirsutum
Gohir.D11G099700 Gossypium hirsutum
Gohir.D12G114000 Gossypium hirsutum
Gohir.D12G235700 Gossypium hirsutum
Gorai.001G156700 Gossypium raimondii
Gorai.004G135600 Gossypium raimondii
Gorai.004G279700 Gossypium raimondii
Gorai.007G025300 Gossypium raimondii
Gorai.007G105900 Gossypium raimondii
Gorai.008G123500 Gossypium raimondii
Gorai.008G252400 Gossypium raimondii
Gorai.009G024200 Gossypium raimondii
Gorai.010G069700 Gossypium raimondii
Gorai.010G080100 Gossypium raimondii
GSVIVG01015262001 Vitis vinifera
GSVIVG01019489001 Vitis vinifera
GSVIVG01027049001 Vitis vinifera
GSVIVG01028741001 Vitis vinifera
HanXRQChr02g0045451 Helianthus annuus
HanXRQChr04g0121001 Helianthus annuus
HanXRQChr05g0138071 Helianthus annuus
HanXRQChr09g0238501 Helianthus annuus
HanXRQChr09g0256511 Helianthus annuus
HanXRQChr10g0319041 Helianthus annuus
HanXRQChr12g0355291 Helianthus annuus
HanXRQChr12g0355481 Helianthus annuus
HanXRQChr13g0390561 Helianthus annuus
HanXRQChr13g0415891 Helianthus annuus
HanXRQChr13g0418071 Helianthus annuus
HanXRQChr13g0419271 Helianthus annuus
Haze_08680 Corylus avellana
Haze_15620 Corylus avellana
Haze_25702 Corylus avellana
Haze_25705 Corylus avellana
Haze_25860 Corylus avellana
Hma1.2p1_0384F.1_g141070 Hydrangea macrophylla
Hma1.2p1_0952F.1_g240860 Hydrangea macrophylla
HPP92_026774 Vanilla planifolia
Hund09197 Selenicereus undatus
Hund11686 Selenicereus undatus
Hund26160 Selenicereus undatus
Lalb_Chr04g0261751 Lupinus albus
Lalb_Chr05g0222811 Lupinus albus
Lalb_Chr05g0224271 Lupinus albus
Lalb_Chr08g0240611 Lupinus albus
Lalb_Chr09g0331161 Lupinus albus
Lalb_Chr09g0332641 Lupinus albus
Lalb_Chr11g0066541 Lupinus albus
Lalb_Chr22g0349831 Lupinus albus
Lalb_Chr22g0352861 Lupinus albus
Lalb_Chr23g0271451 Lupinus albus
Lalb_Chr24g0393961 Lupinus albus
Lj1g0002747 Lotus japonicus
Lj1g0008485 Lotus japonicus
Lj1g0015216 Lotus japonicus
Lj2g0011378 Lotus japonicus
Lj2g0018057 Lotus japonicus
Lj2g0025499 Lotus japonicus
Lj4g0006841 Lotus japonicus
Lsat_1_v5_gn_5_101580 Lactuca sativa
Lsat_1_v5_gn_5_146201 Lactuca sativa
Lsat_1_v5_gn_6_11901 Lactuca sativa
Lsat_1_v5_gn_7_1901 Lactuca sativa
Lsat_1_v5_gn_7_38720 Lactuca sativa
Lsat_1_v5_gn_8_95100 Lactuca sativa
Manes.01G249100 Manihot esculenta
Manes.02G013300 Manihot esculenta
Manes.03G019400 Manihot esculenta
Manes.05G026100 Manihot esculenta
Manes.06G156900 Manihot esculenta
Manes.14G018800 Manihot esculenta
Manes.16G116900 Manihot esculenta
Mapoly0024s0017 Marchantia polymorpha
Mapoly0079s0002 Marchantia polymorpha
MBI01_g10310_MAGBIO Magnolia biondii
MBI01_g34159_MAGBIO Magnolia biondii
MBI04_g08938_MAGBIO Magnolia biondii
MBI06_g32761_MAGBIO Magnolia biondii
MBI07_g20448_MAGBIO Magnolia biondii
MBI16_g14675_MAGBIO Magnolia biondii
MD01G1076000 Malus domestica
MD01G1214900 Malus domestica
MD02G1048700 Malus domestica
MD02G1072000 Malus domestica
MD07G1144900 Malus domestica
MD07G1284600 Malus domestica
MD15G1187000 Malus domestica
MD15G1201800 Malus domestica
Medtr1g028610 Medicago truncatula
Medtr3g090830 Medicago truncatula
Medtr6g086350 Medicago truncatula
Medtr6g086365 Medicago truncatula
Medtr6g086390 Medicago truncatula
Medtr6g090535 Medicago truncatula
Medtr8g083480 Medicago truncatula
Medtr8g099245 Medicago truncatula
MELO3C004554.2 Cucumis melo
MELO3C006062.2 Cucumis melo
MELO3C026936.2 Cucumis melo
MELO3C032818.2 Cucumis melo
MELO3C034006.2 Cucumis melo
Migut.A00685 Erythranthe guttata
Migut.E01230 Erythranthe guttata
Migut.F00245 Erythranthe guttata
Migut.J01071 Erythranthe guttata
Migut.K00456 Erythranthe guttata
Migut.K00567 Erythranthe guttata
Nitab4.5_0000223g0120 Nicotiana tabacum
Nitab4.5_0000305g0110 Nicotiana tabacum
Nitab4.5_0000522g0080 Nicotiana tabacum
Nitab4.5_0000540g0040 Nicotiana tabacum
Nitab4.5_0002944g0160 Nicotiana tabacum
Nitab4.5_0003781g0080 Nicotiana tabacum
Nitab4.5_0004161g0070 Nicotiana tabacum
Nitab4.5_0008261g0010 Nicotiana tabacum
Nitab4.5_0009232g0020 Nicotiana tabacum
Nn2g11765 Nelumbo nucifera
Nn8g38978 Nelumbo nucifera
Nn8g39211 Nelumbo nucifera
Oeu002227.1 Olea europaea
Oeu030571.1 Olea europaea
Oeu036887.1 Olea europaea
Oeu055863.1 Olea europaea
Os01g0657000 Oryza sativa ssp. japonica
Os02g0264800 Oryza sativa ssp. japonica
Os05g0217000 Oryza sativa ssp. japonica
Os06g0505700 Oryza sativa ssp. japonica
Peaxi162Scf00099g01816 Petunia axillaris
Peaxi162Scf00102g01739 Petunia axillaris
Peaxi162Scf00354g00610 Petunia axillaris
Peaxi162Scf00498g00030 Petunia axillaris
Peaxi162Scf00546g10017 Petunia axillaris
Peaxi162Scf00560g00128 Petunia axillaris
Peaxi162Scf00904g00321 Petunia axillaris
Peaxi162Scf01012g00121 Petunia axillaris
PGR031G3192 Punica granatum
PGR042G1428 Punica granatum
PGR042G2194 Punica granatum
PGR142G3584 Punica granatum
PGSC0003DMG400000207 Solanum tuberosum
PGSC0003DMG400000317 Solanum tuberosum
PGSC0003DMG400005834 Solanum tuberosum
PGSC0003DMG400009099 Solanum tuberosum
PGSC0003DMG400012165 Solanum tuberosum
PGSC0003DMG400019380 Solanum tuberosum
Phvul.001G079000 Phaseolus vulgaris
Phvul.002G162600 Phaseolus vulgaris
Phvul.002G296000 Phaseolus vulgaris
Phvul.004G162500 Phaseolus vulgaris
Phvul.004G173101 Phaseolus vulgaris
Phvul.006G110400 Phaseolus vulgaris
Phvul.009G137200 Phaseolus vulgaris
Potri.001G094700 Populus trichocarpa
Potri.003G136600 Populus trichocarpa
Potri.012G032000 Populus trichocarpa
Potri.014G094800 Populus trichocarpa
Potri.015G022600 Populus trichocarpa
Potri.018G078801 Populus trichocarpa
Prupe.2G183500 Prunus persica
Prupe.2G306800 Prunus persica
Prupe.5G114400 Prunus persica
Prupe.7G215700 Prunus persica
Prupe.7G229500 Prunus persica
Psat1g040960 Pisum sativum
Psat1g048920 Pisum sativum
Psat5g079840 Pisum sativum
Psat6g039320 Pisum sativum
Psat7g027760 Pisum sativum
QL02p031550 Quercus lobata
QL02p057492 Quercus lobata
QL04p058637 Quercus lobata
QL04p059433 Quercus lobata
RcHm_v2.0_Chr1g0358781 Rosa chinensis
RcHm_v2.0_Chr1g0380071 Rosa chinensis
RcHm_v2.0_Chr2g0090651 Rosa chinensis
RcHm_v2.0_Chr2g0092451 Rosa chinensis
Rhsim01G0169300 Rhododendron simsii
Rhsim03G0243700 Rhododendron simsii
Rhsim07G0006800 Rhododendron simsii
Sabra02G0144100 Salix brachista
SalBow1G1089 Salvia bowleyana
SalBow1G1836 Salvia bowleyana
SalBow1G7997 Salvia bowleyana
SalBow4G2515 Salvia bowleyana
Sc08g0007440 Simmondsia chinensis
Sc13g0009580 Simmondsia chinensis
Sed0001168 Sechium edule
Sed0004504 Sechium edule
Sed0005352 Sechium edule
Sed0009621 Sechium edule
Sed0009789 Sechium edule
Sed0020989 Sechium edule
Sed0021496 Sechium edule
Sed0024129 Sechium edule
SEGI_03889 Sequoiadendron giganteum
SEGI_03997 Sequoiadendron giganteum
SMO143G0078 Selaginella moellendorffii
Solyc01g095515.1 Solanum lycopersicum
Solyc08g081970.3 Solanum lycopersicum
Solyc10g011730.3 Solanum lycopersicum
Sopen01g039270 Solanum pennellii
Sopen08g004080 Solanum pennellii
Sopen08g030260 Solanum pennellii
Sopen10g005520 Solanum pennellii
Sp4g28370 Schrenkiella parvula
Sp5g01770 Schrenkiella parvula
Sp6g15410 Schrenkiella parvula
TAR375G0324 Trochodendron aralioides
TAR626G0551 Trochodendron aralioides
TAR629G1878 Trochodendron aralioides
TAR636G2986 Trochodendron aralioides
THA.LOC104802055 Tarenaya hassleriana
THA.LOC104817336 Tarenaya hassleriana
THA.LOC104821373 Tarenaya hassleriana
THA.LOC109116865 Tarenaya hassleriana
THA.LOC109117149 Tarenaya hassleriana
Thecc.01G347500 Theobroma cacao
Thecc.03G192400 Theobroma cacao
Thecc.03G292300 Theobroma cacao
Thecc.09G095500 Theobroma cacao
Thecc.09G111900 Theobroma cacao
Thhalv10001752m.g Eutrema salsugineum
Thhalv10005210m.g Eutrema salsugineum
Thhalv10015233m.g Eutrema salsugineum
TPR.G35276 Trifolium pratense
TWI14G0223 Tripterygium wilfordii
TWI15G0052 Tripterygium wilfordii
TWI39G0811 Tripterygium wilfordii
TWI59G0487 Tripterygium wilfordii
TWI81G0992 Tripterygium wilfordii
unitig_0.g2242 Utricularia gibba
unitig_62.g23800 Utricularia gibba
unitig_736.g22817 Utricularia gibba
unitig_899.g14812 Utricularia gibba
vmacro13148 Vaccinium macrocarpon
vmacro22519 Vaccinium macrocarpon
VMungo1309G1073 Vigna mungo
Zm00001eb203920 Zea mays
Zm00001eb237880 Zea mays
Zm00001eb350580 Zea mays
Zm00001eb359480 Zea mays

User provided reference genes

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