Gene: AT5G53250
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G53250
- Transcript Identifier AT5G53250.1
- Gene Type Coding gene
- Location Chr5 : 21603715-21604007 : positive
Gene Family Information
- ID HOM05D001384
- #Genes/#Species 453/87
- Phylogenetic origin
- ID ORTHO05D001215
- #Genes/#Species 455/87
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G53250.1
- symbol AGP22
- Alias ATAGP22,ARABINOGALACTAN PROTEIN 22
- uniprot Q9FK16
Descriptions
- Description arabinogalactan protein 22
- Computational description arabinogalactan protein 22 (AGP22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1070 (InterPro:IPR009424); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 20 (TAIR:AT3G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0031225 | IEA | GOA Database | anchored component of membrane | |
| GO:0031225 | TAS | Gene Ontology | anchored component of membrane | 1 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009424 | Arabinogalactan protein 16/20/22/41 |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |