Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20070 Brassica napus
A05p39070 Brassica napus
A09p19780 Brassica napus
A09p19940 Brassica napus
Aa31LG1G21610 Aethionema arabicum
Aa31LG3G2420 Aethionema arabicum
Aa31LG5G21480 Aethionema arabicum
Aa31LG5G21490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.317 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3467 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2468 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2469 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2154 Anthoceros agrestis
AL2G26550 Arabidopsis lyrata
AL3G21210 Arabidopsis lyrata
AL4G32470 Arabidopsis lyrata
AL6G13100 Arabidopsis lyrata
AL6G13110 Arabidopsis lyrata
AL6G13120 Arabidopsis lyrata
Aqoxy4G02820 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5BA12T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9JV9UY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B65H15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9TAJF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2ULVC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9ZRDB Arachis hypogaea
AT2G36325 Arabidopsis thaliana
AT3G09930 Arabidopsis thaliana
AT5G03590 Arabidopsis thaliana
AT5G03600 Arabidopsis thaliana
AT5G03610 Arabidopsis thaliana
ATR0820G228 Amborella trichopoda
Atru.chr12.994 Acer truncatum
Atru.chr12.995 Acer truncatum
Atru.chr12.996 Acer truncatum
Atru.chr8.1577 Acer truncatum
Atru.chr8.1580 Acer truncatum
Atru.chr8.1582 Acer truncatum
AUR62028565 Chenopodium quinoa
AUR62033521 Chenopodium quinoa
BcaB01g03846 Brassica carinata
BcaB01g05797 Brassica carinata
BcaB05g21823 Brassica carinata
BcaB05g21824 Brassica carinata
BcaB05g21827 Brassica carinata
BcaB05g22918 Brassica carinata
BcaB07g31056 Brassica carinata
BcaB07g31070 Brassica carinata
BcaB07g31071 Brassica carinata
BcaC01g05664 Brassica carinata
BcaC03g12994 Brassica carinata
BcaC03g12995 Brassica carinata
BcaC03g12996 Brassica carinata
BcaC03g13004 Brassica carinata
BcaC03g13005 Brassica carinata
BcaC04g21977 Brassica carinata
BcaC04g21992 Brassica carinata
BcaC05g29509 Brassica carinata
BolC3t12717H Brassica oleracea
BolC3t14747H Brassica oleracea
BolC5t34467H Brassica oleracea
BolC9t55403H Brassica oleracea
BolC9t55423H Brassica oleracea
BraA02t04769Z Brassica rapa
BraA03t11257Z Brassica rapa
BraA05t22699Z Brassica rapa
BraA09t37583Z Brassica rapa
BraA09t37602Z Brassica rapa
BraA09t37603Z Brassica rapa
C02p01170 Brassica napus
C03p01650 Brassica napus
C03p23510 Brassica napus
C05p58090 Brassica napus
C09p25080 Brassica napus
C09p25100 Brassica napus
C09p25250 Brassica napus
CAN.G397.36 Capsicum annuum
CAN.G730.42 Capsicum annuum
CANSAT56G0146 Cannabis sativa
CANSAT56G2150 Cannabis sativa
CANSAT56G4316 Cannabis sativa
CANSAT80G0513 Cannabis sativa
CARHR084460 Cardamine hirsuta
CARHR209690 Cardamine hirsuta
CARHR209700 Cardamine hirsuta
CARHR209730 Cardamine hirsuta
Carub.0002s1426 Capsella rubella
Carub.0003s0904 Capsella rubella
Carub.0004s1810 Capsella rubella
Carub.0006s0243 Capsella rubella
Carub.0006s0244 Capsella rubella
Carub.0006s0245 Capsella rubella
Carub.0006s0249 Capsella rubella
Carub.0006s0251 Capsella rubella
Carub.0006s0252 Capsella rubella
Ca_08985_v3 Cicer arietinum L.
Ca_22053_v3 Cicer arietinum L.
CBR_g31448 Chara braunii
Cc00_g18870 Coffea canephora
Cc06_g05550 Coffea canephora
CDE06G0997 Ceratophyllum demersum
CDE06G2052 Ceratophyllum demersum
CDE08G0500 Ceratophyllum demersum
Cfa016577 Carpinus fangiana
Cfa016578 Carpinus fangiana
Cfa016581 Carpinus fangiana
Ciclev10011959m.g Citrus clementina
Ciclev10033495m.g Citrus clementina
Ciclev10033618m.g Citrus clementina
CiPaw.09G011200 Carya illinoinensis
CiPaw.09G011300 Carya illinoinensis
CiPaw.09G011500 Carya illinoinensis
CiPaw.10G007600 Carya illinoinensis
CiPaw.10G007700 Carya illinoinensis
CiPaw.10G007800 Carya illinoinensis
CiPaw.10G007900 Carya illinoinensis
CiPaw.10G008000 Carya illinoinensis
ClCG04G009910 Citrullus lanatus
ClCG04G009920 Citrullus lanatus
ClCG04G009930 Citrullus lanatus
ClCG10G019120 Citrullus lanatus
COL.COLO4_29779 Corchorus olitorius
COL.COLO4_38595 Corchorus olitorius
Cpa.g.sc5.47 Carica papaya
CsaV3_3G037140 Cucumis sativus L.
CsaV3_6G040560 Cucumis sativus L.
CsaV3_6G040570 Cucumis sativus L.
CsaV3_6G040580 Cucumis sativus L.
CSS0005027 Camellia sinensis var. sinensis
CSS0012848 Camellia sinensis var. sinensis
CSS0041359 Camellia sinensis var. sinensis
DCAR_009152 Daucus carota
Dinv14518 Davidia involucrata
Dinv17089 Davidia involucrata
Dinv20787 Davidia involucrata
Dinv21225 Davidia involucrata
Dinv31665 Davidia involucrata
Duzib093G1251 Durio zibethinus
Duzib106G1088 Durio zibethinus
Duzib128G1491 Durio zibethinus
EL10Ac7g16946 Beta vulgaris
Eucgr.A01521 Eucalyptus grandis
Eucgr.G02700 Eucalyptus grandis
Eucgr.K02058 Eucalyptus grandis
Eucgr.K02059 Eucalyptus grandis
FAN01G0469 Fragaria x ananassa
FAN02G2318 Fragaria x ananassa
FAN02G2533 Fragaria x ananassa
FAN02G2846 Fragaria x ananassa
FAN03G0810 Fragaria x ananassa
FAN06G0876 Fragaria x ananassa
FAN10G0210 Fragaria x ananassa
FAN14G2127 Fragaria x ananassa
FAN14G3804 Fragaria x ananassa
FAN14G4188 Fragaria x ananassa
FAN14G4710 Fragaria x ananassa
FvH4_6g18290 Fragaria vesca
FvH4_6g18330 Fragaria vesca
FvH4_6g18350 Fragaria vesca
FvH4_7g05761 Fragaria vesca
FvH4_7g05772 Fragaria vesca
Glyma.03G193600 Glycine max
Glyma.06G251900 Glycine max
Glyma.10G070500 Glycine max
Glyma.10G203350 Glycine max
Glyma.13G152950 Glycine max
Glyma.19G193500 Glycine max
Gohir.A01G207400 Gossypium hirsutum
Gohir.A04G064400 Gossypium hirsutum
Gohir.A09G171000 Gossypium hirsutum
Gohir.A12G091400 Gossypium hirsutum
Gohir.D01G196900 Gossypium hirsutum
Gohir.D04G101800 Gossypium hirsutum
Gohir.D09G166700 Gossypium hirsutum
Gohir.D12G091300 Gossypium hirsutum
Gorai.002G241000 Gossypium raimondii
Gorai.006G188500 Gossypium raimondii
Gorai.008G098800 Gossypium raimondii
Gorai.009G405200 Gossypium raimondii
GSVIVG01011220001 Vitis vinifera
GSVIVG01011222001 Vitis vinifera
GSVIVG01011232001 Vitis vinifera
GSVIVG01011239001 Vitis vinifera
GSVIVG01011247001 Vitis vinifera
GSVIVG01033808001 Vitis vinifera
HanXRQChr02g0051281 Helianthus annuus
HanXRQChr02g0051441 Helianthus annuus
HanXRQChr08g0217821 Helianthus annuus
HanXRQChr09g0255881 Helianthus annuus
HanXRQChr13g0401951 Helianthus annuus
Haze_19574 Corylus avellana
Haze_19575 Corylus avellana
Haze_19581 Corylus avellana
Hma1.2p1_0084F.1_g043520 Hydrangea macrophylla
Hma1.2p1_0246F.1_g101630 Hydrangea macrophylla
Hund03970 Selenicereus undatus
Hund06775 Selenicereus undatus
Lalb_Chr01g0018251 Lupinus albus
Lalb_Chr02g0151481 Lupinus albus
Lalb_Chr02g0151491 Lupinus albus
Lalb_Chr02g0151501 Lupinus albus
Lalb_Chr02g0151511 Lupinus albus
Lalb_Chr02g0151521 Lupinus albus
Lalb_Chr02g0151531 Lupinus albus
Lalb_Chr02g0151541 Lupinus albus
Lalb_Chr02g0151551 Lupinus albus
Lalb_Chr02g0151561 Lupinus albus
Lalb_Chr02g0151571 Lupinus albus
Lalb_Chr02g0151581 Lupinus albus
Lalb_Chr02g0151591 Lupinus albus
Lalb_Chr02g0151601 Lupinus albus
Lalb_Chr02g0151611 Lupinus albus
Lalb_Chr02g0151621 Lupinus albus
Lalb_Chr02g0151631 Lupinus albus
Lalb_Chr02g0151691 Lupinus albus
Lalb_Chr02g0155031 Lupinus albus
Lalb_Chr21g0313291 Lupinus albus
Lalb_Chr25g0288511 Lupinus albus
Lj1g0011779 Lotus japonicus
Lj1g0021660 Lotus japonicus
Lj2A134T53 Lonicera japonica
Lj2C30T14 Lonicera japonica
Lj3A999G44 Lonicera japonica
Lj5g0008591 Lotus japonicus
Lj5g0012510 Lotus japonicus
Lj5g0016287 Lotus japonicus
Lj5g0017834 Lotus japonicus
Lj5g0024260 Lotus japonicus
Lj5g0028235 Lotus japonicus
Lsat_1_v5_gn_6_24301 Lactuca sativa
Lsat_1_v5_gn_8_23801 Lactuca sativa
Manes.08G023700 Manihot esculenta
Manes.09G057000 Manihot esculenta
Manes.10G057800 Manihot esculenta
Mapoly0009s0242 Marchantia polymorpha
Mapoly0016s0185 Marchantia polymorpha
Mapoly0053s0104 Marchantia polymorpha
MBI17_g16885_MAGBIO Magnolia biondii
MBI17_g16886_MAGBIO Magnolia biondii
MD02G1255500 Malus domestica
MD07G1066000 Malus domestica
MD12G1022800 Malus domestica
MD14G1019600 Malus domestica
Medtr1g060490 Medicago truncatula
Medtr1g060500 Medicago truncatula
Medtr1g060520 Medicago truncatula
Medtr1g060530 Medicago truncatula
Medtr1g092690 Medicago truncatula
Medtr1g092710 Medicago truncatula
Medtr1g092740 Medicago truncatula
Medtr1g092750 Medicago truncatula
Medtr1g092760 Medicago truncatula
Medtr7g104220 Medicago truncatula
MELO3C009459.2 Cucumis melo
MELO3C024531.2 Cucumis melo
MELO3C024532.2 Cucumis melo
MELO3C024533.2 Cucumis melo
MELO3C024534.2 Cucumis melo
Migut.J01060 Erythranthe guttata
Migut.J01061 Erythranthe guttata
Migut.J01062 Erythranthe guttata
Migut.J01063 Erythranthe guttata
Migut.J01064 Erythranthe guttata
MSTRG.19247 Avicennia marina
MSTRG.5826 Avicennia marina
MSTRG.9099 Avicennia marina
Nitab4.5_0000794g0060 Nicotiana tabacum
Nitab4.5_0001437g0200 Nicotiana tabacum
Nitab4.5_0002400g0050 Nicotiana tabacum
Nitab4.5_0010239g0010 Nicotiana tabacum
Nn2g14091 Nelumbo nucifera
Nn2g14093 Nelumbo nucifera
Nn2g14096 Nelumbo nucifera
Nn2g14097 Nelumbo nucifera
Nn2g14098 Nelumbo nucifera
Nn2g14100 Nelumbo nucifera
Nn2g14101 Nelumbo nucifera
Nn6g34968 Nelumbo nucifera
Nn6g34969 Nelumbo nucifera
Nn6g34970 Nelumbo nucifera
Nn6g34971 Nelumbo nucifera
Nn6g34974 Nelumbo nucifera
Oeu026189.1 Olea europaea
Oeu030895.1 Olea europaea
Oeu056912.1 Olea europaea
Os04g0650200 Oryza sativa ssp. japonica
Os09g0567800 Oryza sativa ssp. japonica
Peaxi162Scf00036g00217 Petunia axillaris
Peaxi162Scf00173g00091 Petunia axillaris
PGR004G0732 Punica granatum
PGR142G0098 Punica granatum
PGR142G1676 Punica granatum
PGR142G2526 Punica granatum
PGR142G3811 Punica granatum
PGR142G4029 Punica granatum
PGSC0003DMG400008961 Solanum tuberosum
PGSC0003DMG400019470 Solanum tuberosum
Phvul.001G188600 Phaseolus vulgaris
Phvul.007G103600 Phaseolus vulgaris
Phvul.007G103700 Phaseolus vulgaris
Phvul.007G228600 Phaseolus vulgaris
Potri.001G406500 Populus trichocarpa
Potri.005G053100 Populus trichocarpa
Potri.010G230100 Populus trichocarpa
Potri.010G236800 Populus trichocarpa
Potri.010G236951 Populus trichocarpa
Potri.010G237000 Populus trichocarpa
Pp3c10_5750 Physcomitrium patens
Pp3c11_12330 Physcomitrium patens
Pp3c14_4080 Physcomitrium patens
Pp3c1_16800 Physcomitrium patens
Pp3c1_2040 Physcomitrium patens
Pp3c1_22780 Physcomitrium patens
Pp3c2_17490 Physcomitrium patens
Pp3c2_23550 Physcomitrium patens
Pp3c2_30910 Physcomitrium patens
Pp3c2_33980 Physcomitrium patens
Pp3c6_1880 Physcomitrium patens
Pp3c7_22870 Physcomitrium patens
Prupe.2G080100 Prunus persica
Prupe.2G080200 Prunus persica
Prupe.2G080500 Prunus persica
Prupe.2G080800 Prunus persica
Prupe.2G081000 Prunus persica
Prupe.7G114000 Prunus persica
Psat0s1572g0040 Pisum sativum
Psat0s3683g0040 Pisum sativum
Psat0s3683g0080 Pisum sativum
Psat3g034560 Pisum sativum
Psat3g053480 Pisum sativum
Psat6g081800 Pisum sativum
Psat6g081880 Pisum sativum
Psat6g177360 Pisum sativum
Psat6g177400 Pisum sativum
Psat6g177440 Pisum sativum
Psat6g177520 Pisum sativum
PSO339G1207 Papaver somniferum
PSO339G1693 Papaver somniferum
PSO339G3644 Papaver somniferum
PSO384G1098 Papaver somniferum
PSO384G2006 Papaver somniferum
PSO384G2773 Papaver somniferum
PSO384G2987 Papaver somniferum
PSO425G0023 Papaver somniferum
PSO425G0031 Papaver somniferum
PSO425G0053 Papaver somniferum
QL04p048518 Quercus lobata
QL07p039494 Quercus lobata
QL07p039507 Quercus lobata
QL07p039525 Quercus lobata
RcHm_v2.0_Chr1g0332821 Rosa chinensis
RcHm_v2.0_Chr1g0332841 Rosa chinensis
RcHm_v2.0_Chr3g0472731 Rosa chinensis
RcHm_v2.0_Chr3g0472801 Rosa chinensis
RcHm_v2.0_Chr3g0472831 Rosa chinensis
Rhsim03G0077500 Rhododendron simsii
Rhsim03G0077600 Rhododendron simsii
Rhsim03G0077800 Rhododendron simsii
Rhsim03G0077900 Rhododendron simsii
Rhsim03G0079700 Rhododendron simsii
Rhsim03G0101300 Rhododendron simsii
Sabra10G0178500 Salix brachista
Sabra10G0183700 Salix brachista
Sabra10G0183900 Salix brachista
Sabra10G0184100 Salix brachista
Sabra10G0184300 Salix brachista
Sabra10G0184600 Salix brachista
Sabra10G0184700 Salix brachista
Sabra10G0184800 Salix brachista
Sabra10G0185100 Salix brachista
Sabra10G0185200 Salix brachista
Sabra10G0185300 Salix brachista
Sabra10G0185400 Salix brachista
Sabra10G0185500 Salix brachista
Sabra16G0267900 Salix brachista
Sabra16G0269800 Salix brachista
Sabra16G0270000 Salix brachista
Sabra16G0270100 Salix brachista
SalBow3G0308 Salvia bowleyana
SalBow6G3537 Salvia bowleyana
Sc02g0000990 Simmondsia chinensis
Sc09g0005500 Simmondsia chinensis
Sed0002253 Sechium edule
Sed0005197 Sechium edule
Sed0018050 Sechium edule
Sed0018556 Sechium edule
SEGI_10490 Sequoiadendron giganteum
SEGI_10505 Sequoiadendron giganteum
SEGI_11525 Sequoiadendron giganteum
SEGI_12869 Sequoiadendron giganteum
SEGI_15309 Sequoiadendron giganteum
SEGI_17967 Sequoiadendron giganteum
SEGI_18743 Sequoiadendron giganteum
SEGI_23111 Sequoiadendron giganteum
SEGI_23899 Sequoiadendron giganteum
SEGI_24400 Sequoiadendron giganteum
SEGI_25685 Sequoiadendron giganteum
SEGI_25938 Sequoiadendron giganteum
SEGI_27429 Sequoiadendron giganteum
SEGI_32829 Sequoiadendron giganteum
SEGI_36021 Sequoiadendron giganteum
SEGI_36818 Sequoiadendron giganteum
SEGI_39508 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06760 Striga asiatica
SGA_v2.0_scaffold75G24763 Striga asiatica
SHI21297 Sapria himalayana
Solyc11g007180.3 Solanum lycopersicum
Sopen09g004460 Solanum pennellii
Sopen11g003100 Solanum pennellii
Sp2g03340 Schrenkiella parvula
Sp2g07320 Schrenkiella parvula
Sp3g08290 Schrenkiella parvula
Sp4g18570 Schrenkiella parvula
Sp6g39140 Schrenkiella parvula
Sp6g39150 Schrenkiella parvula
Sp6g39160 Schrenkiella parvula
SpUn0101_0040 Schrenkiella parvula
TAR633G0764 Trochodendron aralioides
TAR636G3325 Trochodendron aralioides
THA.LOC104826927 Tarenaya hassleriana
THA.LOC104827516 Tarenaya hassleriana
Thecc.05G085700 Theobroma cacao
Thhalv10013924m.g Eutrema salsugineum
Thhalv10013966m.g Eutrema salsugineum
Thhalv10022090m.g Eutrema salsugineum
Thhalv10024112m.g Eutrema salsugineum
TPR.G11005 Trifolium pratense
TPR.G18682 Trifolium pratense
TPR.G18685 Trifolium pratense
TPR.G18701 Trifolium pratense
TPR.G18703 Trifolium pratense
TPR.G19524 Trifolium pratense
TPR.G32995 Trifolium pratense
TPR.G35427 Trifolium pratense
TWI15G0335 Tripterygium wilfordii
TWI38G1588 Tripterygium wilfordii
TWI38G1650 Tripterygium wilfordii
TWI38G2041 Tripterygium wilfordii
TWI53G1983 Tripterygium wilfordii
TWI63G0365 Tripterygium wilfordii
TWI63G1599 Tripterygium wilfordii
TWI74G0331 Tripterygium wilfordii
unitig_22.g5123 Utricularia gibba
unitig_22.g5124 Utricularia gibba
vmacro07391 Vaccinium macrocarpon
vmacro07392 Vaccinium macrocarpon
vmacro07393 Vaccinium macrocarpon
vmacro23531 Vaccinium macrocarpon
VMungo0720G0574 Vigna mungo
VMungo0720G0666 Vigna mungo
VMungo0720G1711 Vigna mungo
VMungo1383G0419 Vigna mungo
Zm00001eb121580 Zea mays

User provided reference genes

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