Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28920 Brassica napus
A03p66050 Brassica napus
A07p13410 Brassica napus
A07p36500 Brassica napus
A09p40690 Brassica napus
A09p68890 Brassica napus
A10p00800 Brassica napus
Aa31LG1G10460 Aethionema arabicum
Aa31LG2G10320 Aethionema arabicum
Aa31LG5G1160 Aethionema arabicum
Aa31LG7G7950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3207 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3211 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.294 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.305 Anthoceros agrestis
Actinidia04052 Actinidia chinensis
Actinidia04171 Actinidia chinensis
Actinidia08189 Actinidia chinensis
Actinidia14989 Actinidia chinensis
Actinidia22219 Actinidia chinensis
Actinidia28086 Actinidia chinensis
Actinidia33523 Actinidia chinensis
Ah.05g178950 Amaranthus hybridus
AL1G11430 Arabidopsis lyrata
AL1G38010 Arabidopsis lyrata
AL2G16840 Arabidopsis lyrata
AL2G16850 Arabidopsis lyrata
AL2G29330 Arabidopsis lyrata
Aqoxy2G02362 Aquilegia oxysepala
Aqoxy2G02363 Aquilegia oxysepala
Aqoxy3G00869 Aquilegia oxysepala
Aqoxy5G04344 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IPZ2W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0U4Z5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3VL916 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5TA7LB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5X7PBZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6AA68Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6IHK1L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75FRI4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8V8ZF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E99MKB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXAX6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7YSG8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4THJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5PSIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LI6EZ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAQK9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQGZ2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9SQSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQ9M9S Arachis hypogaea
AT1G01090 Arabidopsis thaliana
AT1G24180 Arabidopsis thaliana
AT1G59900 Arabidopsis thaliana
ATR0304G006 Amborella trichopoda
ATR0743G158 Amborella trichopoda
ATR1101G084 Amborella trichopoda
Atru.chr11.1927 Acer truncatum
Atru.chr5.767 Acer truncatum
Atru.chr9.1849 Acer truncatum
AUR62016854 Chenopodium quinoa
AUR62026324 Chenopodium quinoa
AUR62026523 Chenopodium quinoa
AUR62038348 Chenopodium quinoa
AUR62041497 Chenopodium quinoa
BcaB03g13555 Brassica carinata
BcaB04g20238 Brassica carinata
BcaB05g23169 Brassica carinata
BcaB06g27052 Brassica carinata
BcaB07g32401 Brassica carinata
BcaC02g10674 Brassica carinata
BcaC02g10676 Brassica carinata
BcaC05g26320 Brassica carinata
BcaC06g31800 Brassica carinata
BcaC06g35080 Brassica carinata
BcaC07g39238 Brassica carinata
BcaC07g42248 Brassica carinata
BcaC07g42249 Brassica carinata
BcaC07g42257 Brassica carinata
BcaC07g42258 Brassica carinata
BcaC07g42362 Brassica carinata
BcaC07g42365 Brassica carinata
BcaC07g42368 Brassica carinata
BcaC07g42372 Brassica carinata
BcaC08g46460 Brassica carinata
BcaC09g49451 Brassica carinata
BolC1t03620H Brassica oleracea
BolC4t24148H Brassica oleracea
BolC5t28867H Brassica oleracea
BolC5t31035H Brassica oleracea
BolC6t39468H Brassica oleracea
BolC7t42523H Brassica oleracea
BolC8t52861H Brassica oleracea
BraA01t03013Z Brassica rapa
BraA03t15660Z Brassica rapa
BraA07t29113Z Brassica rapa
BraA07t31221Z Brassica rapa
BraA09t39564Z Brassica rapa
BraA09t42229Z Brassica rapa
BraA10t42356Z Brassica rapa
C01p36600 Brassica napus
C04p26550 Brassica napus
C05p00840 Brassica napus
C05p23350 Brassica napus
C05p51390 Brassica napus
C06p43960 Brassica napus
C07p20040 Brassica napus
C08p52820 Brassica napus
C08p53460 Brassica napus
CAN.G10.3 Capsicum annuum
CAN.G1591.4 Capsicum annuum
CAN.G549.6 Capsicum annuum
CAN.G57.3 Capsicum annuum
CANSAT01G2564 Cannabis sativa
CANSAT56G2429 Cannabis sativa
CARHR001370 Cardamine hirsuta
CARHR024560 Cardamine hirsuta
CARHR053170 Cardamine hirsuta
CARHR088890 Cardamine hirsuta
CARHR259870 Cardamine hirsuta
CARHR259890 Cardamine hirsuta
Carub.0001s0113 Capsella rubella
Carub.0001s2367 Capsella rubella
Carub.0002s0537 Capsella rubella
Ca_04638_v3 Cicer arietinum L.
Ca_09545_v3 Cicer arietinum L.
Ca_26062_v3 Cicer arietinum L.
Ca_27002_v3 Cicer arietinum L.
CBR_g23748 Chara braunii
CBR_g48779 Chara braunii
CBR_g49974 Chara braunii
Cc02_g39940 Coffea canephora
Cc11_g14000 Coffea canephora
CDE02G4262 Ceratophyllum demersum
CDE08G0084 Ceratophyllum demersum
CDE08G0646 Ceratophyllum demersum
CDE10G0394 Ceratophyllum demersum
CDE10G1252 Ceratophyllum demersum
Cfa003735 Carpinus fangiana
Cfa009085 Carpinus fangiana
Cfa024742 Carpinus fangiana
Ciclev10020210m.g Citrus clementina
Ciclev10031744m.g Citrus clementina
CiPaw.01G082400 Carya illinoinensis
CiPaw.05G144500 Carya illinoinensis
CiPaw.06G076900 Carya illinoinensis
ClCG05G024910 Citrullus lanatus
ClCG06G002270 Citrullus lanatus
ClCG08G007440 Citrullus lanatus
COL.COLO4_23047 Corchorus olitorius
COL.COLO4_36275 Corchorus olitorius
COL.COLO4_36276 Corchorus olitorius
Cpa.g.sc193.13 Carica papaya
Cpa.g.sc5.322 Carica papaya
Cre02.g099850 Chlamydomonas reinhardtii
Cre07.g337650 Chlamydomonas reinhardtii
CsaV3_5G031990 Cucumis sativus L.
CsaV3_6G008320 Cucumis sativus L.
CsaV3_6G036340 Cucumis sativus L.
CSS0001663 Camellia sinensis var. sinensis
CSS0024250 Camellia sinensis var. sinensis
CSS0031461 Camellia sinensis var. sinensis
CSS0045859 Camellia sinensis var. sinensis
DCAR_002977 Daucus carota
DCAR_007113 Daucus carota
DCAR_026571 Daucus carota
DCAR_032213 Daucus carota
Dinv18760 Davidia involucrata
Dinv24922 Davidia involucrata
Dinv32644 Davidia involucrata
Duzib138G1500 Durio zibethinus
Duzib248G1504 Durio zibethinus
ECA246G5239 Erigeron canadensis
ECA247G2213 Erigeron canadensis
EL10Ac3g06767 Beta vulgaris
EL10Ac4g09578 Beta vulgaris
EL10Ac6g13096 Beta vulgaris
Eucgr.B03379 Eucalyptus grandis
Eucgr.E01069 Eucalyptus grandis
Eucgr.E01071 Eucalyptus grandis
FAN01G1819 Fragaria x ananassa
FAN03G2680 Fragaria x ananassa
FAN06G2862 Fragaria x ananassa
FAN06G2960 Fragaria x ananassa
FAN07G2758 Fragaria x ananassa
FAN10G2035 Fragaria x ananassa
FAN10G3904 Fragaria x ananassa
FAN12G2700 Fragaria x ananassa
FAN17G2471 Fragaria x ananassa
FAN22G2310 Fragaria x ananassa
FvH4_4g35280 Fragaria vesca
FvH4_7g17660 Fragaria vesca
Glyma.01G038002 Glycine max
Glyma.02G026800 Glycine max
Glyma.03G261000 Glycine max
Glyma.07G049600 Glycine max
Glyma.08G292800 Glycine max
Glyma.16G018300 Glycine max
Glyma.18G130500 Glycine max
Glyma.19G260000 Glycine max
Gohir.A03G144100 Gossypium hirsutum
Gohir.A05G319600 Gossypium hirsutum
Gohir.A11G101000 Gossypium hirsutum
Gohir.A12G116700 Gossypium hirsutum
Gohir.A12G191366 Gossypium hirsutum
Gohir.A12G191500 Gossypium hirsutum
Gohir.D02G167300 Gossypium hirsutum
Gohir.D04G054766 Gossypium hirsutum
Gohir.D05G321900 Gossypium hirsutum
Gohir.D08G147701 Gossypium hirsutum
Gohir.D09G039851 Gossypium hirsutum
Gohir.D11G105600 Gossypium hirsutum
Gohir.D11G223800 Gossypium hirsutum
Gohir.D11G233040 Gossypium hirsutum
Gohir.D12G120200 Gossypium hirsutum
Gohir.D12G193500 Gossypium hirsutum
Gohir.D12G193800 Gossypium hirsutum
Gohir.D13G053801 Gossypium hirsutum
Gorai.005G187700 Gossypium raimondii
Gorai.006G045300 Gossypium raimondii
Gorai.007G111500 Gossypium raimondii
Gorai.007G112900 Gossypium raimondii
Gorai.008G130900 Gossypium raimondii
Gorai.008G131200 Gossypium raimondii
Gorai.008G208500 Gossypium raimondii
Gorai.009G345400 Gossypium raimondii
Gorai.011G241300 Gossypium raimondii
GSVIVG01016131001 Vitis vinifera
GSVIVG01019683001 Vitis vinifera
GSVIVG01020139001 Vitis vinifera
GSVIVG01027439001 Vitis vinifera
HanXRQChr04g0119921 Helianthus annuus
HanXRQChr13g0426481 Helianthus annuus
HanXRQChr15g0476061 Helianthus annuus
Haze_12117 Corylus avellana
Haze_13696 Corylus avellana
Haze_15734 Corylus avellana
Haze_26614 Corylus avellana
Haze_27251 Corylus avellana
Hma1.2p1_0074F.1_g038730 Hydrangea macrophylla
Hma1.2p1_0289F.1_g114600 Hydrangea macrophylla
Hma1.2p1_2492F.1_g323240 Hydrangea macrophylla
HPP92_021499 Vanilla planifolia
HPP92_021520 Vanilla planifolia
HPP92_021883 Vanilla planifolia
Hund05932 Selenicereus undatus
Hund16752 Selenicereus undatus
Hund25299 Selenicereus undatus
Lalb_Chr05g0217321 Lupinus albus
Lalb_Chr05g0230091 Lupinus albus
Lalb_Chr09g0326581 Lupinus albus
Lalb_Chr10g0100881 Lupinus albus
Lalb_Chr16g0382581 Lupinus albus
Lj2A152G22 Lonicera japonica
Lj2g0005392 Lotus japonicus
Lj3A1046T49 Lonicera japonica
Lj3g0000851 Lotus japonicus
Lj6C798T10 Lonicera japonica
Lj9A607T80 Lonicera japonica
Lj9A607T81 Lonicera japonica
Lsat_1_v5_gn_0_11040 Lactuca sativa
Lsat_1_v5_gn_2_75740 Lactuca sativa
Lsat_1_v5_gn_3_140821 Lactuca sativa
Lsat_1_v5_gn_3_49320 Lactuca sativa
Lsat_1_v5_gn_6_23561 Lactuca sativa
Lsat_1_v5_gn_7_86481 Lactuca sativa
Lsat_1_v5_gn_8_101580 Lactuca sativa
Lsat_1_v5_gn_8_92940 Lactuca sativa
Manes.01G194500 Manihot esculenta
Manes.01G239900 Manihot esculenta
Manes.05G016500 Manihot esculenta
Manes.05G093200 Manihot esculenta
Mapoly0005s0206 Marchantia polymorpha
Mapoly0036s0100 Marchantia polymorpha
Mapoly0083s0076 Marchantia polymorpha
MBI04_g22065_MAGBIO Magnolia biondii
MBI12_g11800_MAGBIO Magnolia biondii
MBI14_g08136_MAGBIO Magnolia biondii
MCO06G282 Micromonas commoda
MD07G1159600 Malus domestica
MD12G1019100 Malus domestica
MD13G1084800 Malus domestica
MD16G1083900 Malus domestica
Medtr5g036600 Medicago truncatula
Medtr7g118200 Medicago truncatula
Medtr8g024310 Medicago truncatula
Medtr8g062670 Medicago truncatula
MELO3C012035.2 Cucumis melo
MELO3C019789.2 Cucumis melo
MELO3C022306.2 Cucumis melo
Migut.D01961 Erythranthe guttata
Migut.E00131 Erythranthe guttata
Migut.L01378 Erythranthe guttata
MSTRG.13389 Avicennia marina
MSTRG.4362 Avicennia marina
MSTRG.646 Avicennia marina
MSTRG.7852 Avicennia marina
MSTRG.9680 Avicennia marina
Nitab4.5_0000034g0170 Nicotiana tabacum
Nitab4.5_0000073g0440 Nicotiana tabacum
Nitab4.5_0000170g0230 Nicotiana tabacum
Nitab4.5_0000349g0030 Nicotiana tabacum
Nitab4.5_0000807g0170 Nicotiana tabacum
Nitab4.5_0000952g0060 Nicotiana tabacum
Nitab4.5_0001030g0150 Nicotiana tabacum
Nitab4.5_0002570g0010 Nicotiana tabacum
Nitab4.5_0005168g0010 Nicotiana tabacum
Nitab4.5_0015511g0010 Nicotiana tabacum
Nn3g17046 Nelumbo nucifera
Nn3g18802 Nelumbo nucifera
Nn4g22947 Nelumbo nucifera
Nn5g30008 Nelumbo nucifera
Nn6g34714 Nelumbo nucifera
Oeu007913.1 Olea europaea
Oeu015867.1 Olea europaea
Oeu028218.1 Olea europaea
Oeu043195.1 Olea europaea
Oeu044531.1 Olea europaea
Oeu053274.1 Olea europaea
Os02g0739600 Oryza sativa ssp. japonica
Os04g0119400 Oryza sativa ssp. japonica
Os06g0246500 Oryza sativa ssp. japonica
Peaxi162Scf00047g02454 Petunia axillaris
Peaxi162Scf00828g00116 Petunia axillaris
PGR042G0370 Punica granatum
PGR102G0136 Punica granatum
PGR119G1855 Punica granatum
PGSC0003DMG400001927 Solanum tuberosum
PGSC0003DMG400002921 Solanum tuberosum
PGSC0003DMG400022607 Solanum tuberosum
PGSC0003DMG402013561 Solanum tuberosum
Phvul.002G077600 Phaseolus vulgaris
Phvul.003G056300 Phaseolus vulgaris
Phvul.009G257800 Phaseolus vulgaris
Phvul.010G119600 Phaseolus vulgaris
Potri.002G179500 Populus trichocarpa
Potri.008G192500 Populus trichocarpa
Potri.010G038400 Populus trichocarpa
Pp3c12_7580 Physcomitrium patens
Pp3c15_8520 Physcomitrium patens
Pp3c3_24040 Physcomitrium patens
Pp3c4_20210 Physcomitrium patens
Pp3c5_14810 Physcomitrium patens
Pp3c9_5460 Physcomitrium patens
Pp3c9_5550 Physcomitrium patens
PRCOL_00001327 Prasinoderma coloniale
Prupe.1G262100 Prunus persica
Prupe.2G197700 Prunus persica
Psat0s3525g0080 Pisum sativum
Psat2g113840 Pisum sativum
Psat4g127560 Pisum sativum
Psat4g164040 Pisum sativum
Psat5g270440 Pisum sativum
PSO017G0474 Papaver somniferum
PSO063G1331 Papaver somniferum
PSO161G0037 Papaver somniferum
PSO478G4333 Papaver somniferum
PSO541G6414 Papaver somniferum
PSO675G4431 Papaver somniferum
PSO754G0048 Papaver somniferum
QL03p067405 Quercus lobata
QL04p075882 Quercus lobata
QL08p047239 Quercus lobata
RcHm_v2.0_Chr1g0334521 Rosa chinensis
RcHm_v2.0_Chr1g0361101 Rosa chinensis
RcHm_v2.0_Chr4g0444881 Rosa chinensis
Rhsim02G0253800 Rhododendron simsii
Rhsim12G0052000 Rhododendron simsii
Rhsim12G0126600 Rhododendron simsii
Sabra02G0134400 Salix brachista
Sabra08G0145900 Salix brachista
SalBow2G0501 Salvia bowleyana
SalBow2G2064 Salvia bowleyana
SalBow6G6731 Salvia bowleyana
SalBow8G5293 Salvia bowleyana
Sc01g0002190 Simmondsia chinensis
Sc14g0008480 Simmondsia chinensis
Sed0002640 Sechium edule
Sed0007101 Sechium edule
Sed0010105 Sechium edule
Sed0023392 Sechium edule
SEGI_04900 Sequoiadendron giganteum
SEGI_07156 Sequoiadendron giganteum
SEGI_30709 Sequoiadendron giganteum
SEGI_30785 Sequoiadendron giganteum
SEGI_39603 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31766 Striga asiatica
SGA_v2.0_scaffold114G31817 Striga asiatica
SGA_v2.0_scaffold166G38319 Striga asiatica
SGA_v2.0_scaffold173G39199 Striga asiatica
SGA_v2.0_scaffold24G10324 Striga asiatica
SGA_v2.0_scaffold25G10722 Striga asiatica
SGA_v2.0_scaffold63G21682 Striga asiatica
SGA_v2.0_scaffold87G26993 Striga asiatica
SMO062G0001 Selaginella moellendorffii
SMO118G0177 Selaginella moellendorffii
SMO137G0263 Selaginella moellendorffii
SMO238G0044 Selaginella moellendorffii
SMO305G0003 Selaginella moellendorffii
SMO334G0021 Selaginella moellendorffii
SMO361G0356 Selaginella moellendorffii
SMO361G0404 Selaginella moellendorffii
Solyc04g005080.3 Solanum lycopersicum
Solyc05g006520.4 Solanum lycopersicum
Solyc07g042913.1 Solanum lycopersicum
Solyc07g042915.1 Solanum lycopersicum
Solyc07g042917.1 Solanum lycopersicum
Solyc12g009400.2 Solanum lycopersicum
Solyc12g009410.2 Solanum lycopersicum
Sopen04g001100 Solanum pennellii
Sopen05g002470 Solanum pennellii
Sopen07g022520 Solanum pennellii
Sopen12g004390 Solanum pennellii
Sopen12g004400 Solanum pennellii
Sp1g01190 Schrenkiella parvula
Sp1g21530 Schrenkiella parvula
Sp2g04690 Schrenkiella parvula
Sp5g25200 Schrenkiella parvula
TAR374G0152 Trochodendron aralioides
TAR374G0567 Trochodendron aralioides
TAR375G0155 Trochodendron aralioides
TAR622G0391 Trochodendron aralioides
TAR629G2566 Trochodendron aralioides
THA.LOC104801350 Tarenaya hassleriana
THA.LOC104808849 Tarenaya hassleriana
THA.LOC104819639 Tarenaya hassleriana
THA.LOC104822067 Tarenaya hassleriana
THA.LOC104825902 Tarenaya hassleriana
Thecc.01G333300 Theobroma cacao
Thecc.02G238800 Theobroma cacao
Thhalv10007695m.g Eutrema salsugineum
Thhalv10007846m.g Eutrema salsugineum
Thhalv10018680m.g Eutrema salsugineum
Thhalv10023514m.g Eutrema salsugineum
TPR.G17329 Trifolium pratense
TPR.G19340 Trifolium pratense
TPR.G19841 Trifolium pratense
TPR.G29745 Trifolium pratense
TPR.G4770 Trifolium pratense
TWI14G0894 Tripterygium wilfordii
TWI23G0366 Tripterygium wilfordii
TWI36G1465 Tripterygium wilfordii
TWI59G1435 Tripterygium wilfordii
TWI75G0715 Tripterygium wilfordii
unitig_21.g20413 Utricularia gibba
unitig_21.g20446 Utricularia gibba
unitig_744.g24397 Utricularia gibba
vmacro01206 Vaccinium macrocarpon
vmacro11486 Vaccinium macrocarpon
vmacro12643 Vaccinium macrocarpon
vmacro12644 Vaccinium macrocarpon
vmacro16297 Vaccinium macrocarpon
vmacro22663 Vaccinium macrocarpon
VMungo0251G2541 Vigna mungo
VMungo0331G2037 Vigna mungo
VMungo1215G2165 Vigna mungo
VMungo1309G2338 Vigna mungo
Zm00001eb089020 Zea mays
Zm00001eb194780 Zea mays
Zm00001eb225630 Zea mays
Zm00001eb228460 Zea mays
Zm00001eb254060 Zea mays
Zm00001eb371680 Zea mays

User provided reference genes

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