Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09630 Brassica napus
A01p16490 Brassica napus
A03p50530 Brassica napus
A04p28730 Brassica napus
A06p20250 Brassica napus
A07p04010 Brassica napus
A08p11070 Brassica napus
A08p13220 Brassica napus
A09p19260 Brassica napus
A10p29150 Brassica napus
Aa31LG3G10500 Aethionema arabicum
Aa31LG4G16220 Aethionema arabicum
Aa31LG6G11800 Aethionema arabicum
Aa31LG6G290 Aethionema arabicum
Aa31sc16G250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1564 Anthoceros agrestis
Actinidia04241 Actinidia chinensis
Actinidia10856 Actinidia chinensis
Actinidia21915 Actinidia chinensis
Actinidia24698 Actinidia chinensis
Actinidia25902 Actinidia chinensis
Actinidia31500 Actinidia chinensis
Actinidia31783 Actinidia chinensis
Ah.07g207770 Amaranthus hybridus
Ah.09g223930 Amaranthus hybridus
Ah.12g054070 Amaranthus hybridus
AL1G44600 Arabidopsis lyrata
AL3G45150 Arabidopsis lyrata
AL5G26640 Arabidopsis lyrata
AL7G27930 Arabidopsis lyrata
AL7G37070 Arabidopsis lyrata
Aqoxy3G02686 Aquilegia oxysepala
Aqoxy409s001 Aquilegia oxysepala
Aqoxy5G03902 Aquilegia oxysepala
Aqoxy5G03903 Aquilegia oxysepala
Aqoxy7G00750 Aquilegia oxysepala
Aqoxy7G03547 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5QUI8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TQ98L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG4CQN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8M0UL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NK9E2M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SIR7X4 Arachis hypogaea
AT1G30560 Arabidopsis thaliana
AT2G13100 Arabidopsis thaliana
AT3G47420 Arabidopsis thaliana
AT4G17550 Arabidopsis thaliana
AT4G25220 Arabidopsis thaliana
ATR0317G121 Amborella trichopoda
ATR0665G665 Amborella trichopoda
ATR0767G126 Amborella trichopoda
Atru.chr1.725 Acer truncatum
Atru.chr2.2273 Acer truncatum
Atru.chr3.2577 Acer truncatum
Atru.chr7.267 Acer truncatum
Atru.chr9.1229 Acer truncatum
AUR62002203 Chenopodium quinoa
AUR62007151 Chenopodium quinoa
AUR62011248 Chenopodium quinoa
AUR62015499 Chenopodium quinoa
AUR62018860 Chenopodium quinoa
AUR62041456 Chenopodium quinoa
BcaB01g00927 Brassica carinata
BcaB01g02682 Brassica carinata
BcaB03g16460 Brassica carinata
BcaB04g18210 Brassica carinata
BcaB04g18427 Brassica carinata
BcaC01g01827 Brassica carinata
BcaC03g14077 Brassica carinata
BcaC06g33559 Brassica carinata
BcaC06g36222 Brassica carinata
BcaC07g37811 Brassica carinata
BcaC07g38087 Brassica carinata
BcaC09g50796 Brassica carinata
BcaC09g51631 Brassica carinata
BcaNung00081 Brassica carinata
BcaNung03456 Brassica carinata
BcaNung06353 Brassica carinata
BolC1t01086H Brassica oleracea
BolC1t01996H Brassica oleracea
BolC3t19446H Brassica oleracea
BolC7t41053H Brassica oleracea
BolC7t45393H Brassica oleracea
BolC8t48200H Brassica oleracea
BolC8t48501H Brassica oleracea
BolC9t57242H Brassica oleracea
BolC9t57243H Brassica oleracea
BraA01t00905Z Brassica rapa
BraA01t01603Z Brassica rapa
BraA02t06003Z Brassica rapa
BraA02t08062Z Brassica rapa
BraA03t14142Z Brassica rapa
BraA06t25107Z Brassica rapa
BraA07t28192Z Brassica rapa
BraA08t33101Z Brassica rapa
BraA08t33305Z Brassica rapa
C01p11200 Brassica napus
C01p20700 Brassica napus
C03p71520 Brassica napus
C04p26810 Brassica napus
C04p53500 Brassica napus
C07p06370 Brassica napus
C07p48850 Brassica napus
C07p52870 Brassica napus
CAN.G48.20 Capsicum annuum
CAN.G49.1 Capsicum annuum
CAN.G551.20 Capsicum annuum
CAN.G62.3 Capsicum annuum
CANSAT11G2569 Cannabis sativa
CANSAT21G0939 Cannabis sativa
CANSAT56G3821 Cannabis sativa
CARHR030010 Cardamine hirsuta
CARHR105110 Cardamine hirsuta
CARHR156060 Cardamine hirsuta
CARHR224250 Cardamine hirsuta
CARHR232620 Cardamine hirsuta
Carub.0001s2882 Capsella rubella
Carub.0003s2785 Capsella rubella
Carub.0005s1351 Capsella rubella
Carub.0007s1581 Capsella rubella
Carub.0007s2384 Capsella rubella
Ca_17004_v3 Cicer arietinum L.
Ca_19622_v3 Cicer arietinum L.
Ca_22005_v3 Cicer arietinum L.
CBR_g25854 Chara braunii
CBR_g6311 Chara braunii
Cc02_g04240 Coffea canephora
Cc06_g07490 Coffea canephora
Cc08_g11500 Coffea canephora
CDE02G2828 Ceratophyllum demersum
CDE04G1824 Ceratophyllum demersum
CDE06G1252 Ceratophyllum demersum
CDE07G1279 Ceratophyllum demersum
CDE09G0609 Ceratophyllum demersum
CDE11G0215 Ceratophyllum demersum
CDE11G0340 Ceratophyllum demersum
CDE11G0482 Ceratophyllum demersum
CDE12G0142 Ceratophyllum demersum
CDE12G0167 Ceratophyllum demersum
CDE12G0803 Ceratophyllum demersum
Cfa008169 Carpinus fangiana
Cfa020901 Carpinus fangiana
Ciclev10004728m.g Citrus clementina
Ciclev10008087m.g Citrus clementina
Ciclev10019641m.g Citrus clementina
CiPaw.03G093400 Carya illinoinensis
CiPaw.04G060000 Carya illinoinensis
CiPaw.12G047600 Carya illinoinensis
CiPaw.16G118200 Carya illinoinensis
ClCG01G005470 Citrullus lanatus
ClCG06G011970 Citrullus lanatus
COL.COLO4_14124 Corchorus olitorius
COL.COLO4_21684 Corchorus olitorius
COL.COLO4_24117 Corchorus olitorius
Cpa.g.sc3.321 Carica papaya
Cpa.g.sc46.82 Carica papaya
Cpa.g.sc89.8 Carica papaya
Cre12.g503000 Chlamydomonas reinhardtii
CsaV3_1G028430 Cucumis sativus L.
CsaV3_5G005700 Cucumis sativus L.
CSS0007503 Camellia sinensis var. sinensis
CSS0007899 Camellia sinensis var. sinensis
CSS0016319 Camellia sinensis var. sinensis
CSS0022696 Camellia sinensis var. sinensis
CSS0022717 Camellia sinensis var. sinensis
CSS0033927 Camellia sinensis var. sinensis
CSS0050500 Camellia sinensis var. sinensis
DCAR_000651 Daucus carota
DCAR_004594 Daucus carota
DCAR_008871 Daucus carota
DCAR_018108 Daucus carota
DCAR_020190 Daucus carota
Dinv06557 Davidia involucrata
Dinv22948 Davidia involucrata
Dinv28570 Davidia involucrata
Dinv28862 Davidia involucrata
Dinv42921 Davidia involucrata
Dinv43179 Davidia involucrata
Duzib068G0426 Durio zibethinus
Duzib068G1196 Durio zibethinus
Duzib084G1015 Durio zibethinus
Duzib150G0190 Durio zibethinus
Duzib187G0384 Durio zibethinus
Duzib205G0734 Durio zibethinus
Duzib205G1196 Durio zibethinus
ECA232G0430 Erigeron canadensis
ECA233G5134 Erigeron canadensis
ECA234G1044 Erigeron canadensis
ECA238G2838 Erigeron canadensis
EL10Ac3g05844 Beta vulgaris
EL10Ac5g12289 Beta vulgaris
EL10Ac8g18809 Beta vulgaris
Eucgr.A02892 Eucalyptus grandis
Eucgr.C04092 Eucalyptus grandis
Eucgr.E00368 Eucalyptus grandis
Eucgr.K00158 Eucalyptus grandis
Eucgr.K00159 Eucalyptus grandis
FAN01G2529 Fragaria x ananassa
FAN03G2500 Fragaria x ananassa
FAN04G1310 Fragaria x ananassa
FAN06G1188 Fragaria x ananassa
FAN06G3797 Fragaria x ananassa
FAN08G0840 Fragaria x ananassa
FAN09G2179 Fragaria x ananassa
FAN10G1139 Fragaria x ananassa
FAN13G2200 Fragaria x ananassa
FAN18G1235 Fragaria x ananassa
FAN19G2270 Fragaria x ananassa
FAN21G3042 Fragaria x ananassa
FAN23G0836 Fragaria x ananassa
FAN26G0685 Fragaria x ananassa
FvH4_1g01800 Fragaria vesca
FvH4_5g20200 Fragaria vesca
FvH4_7g27550 Fragaria vesca
Glyma.05G064500 Glycine max
Glyma.09G096500 Glycine max
Glyma.09G223700 Glycine max
Glyma.12G013200 Glycine max
Glyma.15G201400 Glycine max
Glyma.17G146300 Glycine max
Glyma.20G074366 Glycine max
Gohir.A03G058900 Gossypium hirsutum
Gohir.A06G051000 Gossypium hirsutum
Gohir.A07G041400 Gossypium hirsutum
Gohir.A12G198500 Gossypium hirsutum
Gohir.A12G213800 Gossypium hirsutum
Gohir.D03G107200 Gossypium hirsutum
Gohir.D06G050100 Gossypium hirsutum
Gohir.D07G045500 Gossypium hirsutum
Gohir.D12G201100 Gossypium hirsutum
Gohir.D12G216400 Gossypium hirsutum
Gorai.001G048600 Gossypium raimondii
Gorai.003G113500 Gossypium raimondii
Gorai.008G216200 Gossypium raimondii
Gorai.008G231800 Gossypium raimondii
Gorai.010G057000 Gossypium raimondii
GSVIVG01002111001 Vitis vinifera
GSVIVG01012880001 Vitis vinifera
GSVIVG01018648001 Vitis vinifera
HanXRQChr07g0205921 Helianthus annuus
HanXRQChr11g0332821 Helianthus annuus
HanXRQChr12g0357041 Helianthus annuus
HanXRQChr14g0461361 Helianthus annuus
HanXRQChr16g0512601 Helianthus annuus
Haze_07978 Corylus avellana
Haze_07988 Corylus avellana
Haze_19327 Corylus avellana
Haze_26942 Corylus avellana
Hma1.2p1_0432F.1_g151720 Hydrangea macrophylla
Hma1.2p1_1008F.1_g247160 Hydrangea macrophylla
Hma1.2p1_3142F.1_g333080 Hydrangea macrophylla
HPP92_010440 Vanilla planifolia
HPP92_012736 Vanilla planifolia
HPP92_025602 Vanilla planifolia
HPP92_025642 Vanilla planifolia
Hund04597 Selenicereus undatus
Hund11326 Selenicereus undatus
Hund13168 Selenicereus undatus
Hund14498 Selenicereus undatus
Lalb_Chr00c54g0413701 Lupinus albus
Lalb_Chr01g0000701 Lupinus albus
Lalb_Chr03g0024281 Lupinus albus
Lalb_Chr05g0220961 Lupinus albus
Lalb_Chr08g0233661 Lupinus albus
Lalb_Chr09g0329851 Lupinus albus
Lalb_Chr11g0072981 Lupinus albus
Lj1C980T2 Lonicera japonica
Lj2A227T60 Lonicera japonica
Lj3g0001480 Lotus japonicus
Lj4g0025538 Lotus japonicus
Lj6g0009460 Lotus japonicus
Lj8A275T76 Lonicera japonica
Lj9A707T55 Lonicera japonica
Lsat_1_v5_gn_2_129281 Lactuca sativa
Lsat_1_v5_gn_5_94301 Lactuca sativa
Lsat_1_v5_gn_8_144501 Lactuca sativa
Lsat_1_v5_gn_8_144561 Lactuca sativa
Lsat_1_v5_gn_8_144601 Lactuca sativa
Lsat_1_v5_gn_9_52100 Lactuca sativa
Manes.01G086900 Manihot esculenta
Manes.03G138500 Manihot esculenta
Manes.06G134900 Manihot esculenta
Manes.14G035900 Manihot esculenta
Mapoly0049s0055 Marchantia polymorpha
MBI15_g25662_MAGBIO Magnolia biondii
MCO03G386 Micromonas commoda
MCO12G416 Micromonas commoda
MD02G1013700 Malus domestica
MD02G1014100 Malus domestica
MD04G1051000 Malus domestica
MD04G1051200 Malus domestica
MD04G1051400 Malus domestica
MD06G1048800 Malus domestica
MD07G1253900 Malus domestica
MD15G1160500 Malus domestica
Medtr0004s0650 Medicago truncatula
Medtr2g460810 Medicago truncatula
Medtr4g099450 Medicago truncatula
MELO3C005383.2 Cucumis melo
MELO3C010269.2 Cucumis melo
Migut.A01051 Erythranthe guttata
Migut.F00474 Erythranthe guttata
Migut.F01182 Erythranthe guttata
Migut.J01266 Erythranthe guttata
MSTRG.12146 Avicennia marina
MSTRG.19623 Avicennia marina
MSTRG.8825 Avicennia marina
Nitab4.5_0000262g0150 Nicotiana tabacum
Nitab4.5_0000262g0160 Nicotiana tabacum
Nitab4.5_0000262g0170 Nicotiana tabacum
Nitab4.5_0000448g0120 Nicotiana tabacum
Nitab4.5_0000506g0120 Nicotiana tabacum
Nitab4.5_0001751g0030 Nicotiana tabacum
Nitab4.5_0002149g0010 Nicotiana tabacum
Nitab4.5_0003456g0070 Nicotiana tabacum
Nitab4.5_0007330g0010 Nicotiana tabacum
Nitab4.5_0008175g0010 Nicotiana tabacum
Nn1g00817 Nelumbo nucifera
Nn1g01038 Nelumbo nucifera
Nn3g20257 Nelumbo nucifera
Nn8g39689 Nelumbo nucifera
Oeu015327.1 Olea europaea
Oeu040210.1 Olea europaea
Oeu040793.1 Olea europaea
Oeu043268.1 Olea europaea
Os02g0652800 Oryza sativa ssp. japonica
Os04g0555300 Oryza sativa ssp. japonica
Os06g0179900 Oryza sativa ssp. japonica
Os08g0156600 Oryza sativa ssp. japonica
Peaxi162Scf00108g00220 Petunia axillaris
Peaxi162Scf00190g00910 Petunia axillaris
Peaxi162Scf00241g00221 Petunia axillaris
Peaxi162Scf00304g01311 Petunia axillaris
PGR042G3127 Punica granatum
PGR042G3347 Punica granatum
PGR102G2657 Punica granatum
PGR142G1126 Punica granatum
PGSC0003DMG400007886 Solanum tuberosum
PGSC0003DMG400014824 Solanum tuberosum
PGSC0003DMG400021591 Solanum tuberosum
PGSC0003DMG401024163 Solanum tuberosum
PGSC0003DMG402024163 Solanum tuberosum
Phvul.003G224300 Phaseolus vulgaris
Phvul.009G210000 Phaseolus vulgaris
Phvul.011G016300 Phaseolus vulgaris
Potri.001G124200 Populus trichocarpa
Potri.001G152300 Populus trichocarpa
Potri.003G082366 Populus trichocarpa
Potri.003G109300 Populus trichocarpa
Potri.018G115000 Populus trichocarpa
Pp3c23_12620 Physcomitrium patens
Pp3c24_3410 Physcomitrium patens
Pp3c24_3423 Physcomitrium patens
PRCOL_00001233 Prasinoderma coloniale
PRCOL_00003496 Prasinoderma coloniale
PRCOL_00003608 Prasinoderma coloniale
PRCOL_00004552 Prasinoderma coloniale
Prupe.2G277200 Prunus persica
Prupe.3G036200 Prunus persica
Prupe.5G059000 Prunus persica
Prupe.7G255700 Prunus persica
Psat1g023040 Pisum sativum
Psat4g075040 Pisum sativum
Psat7g150760 Pisum sativum
PSO063G7558 Papaver somniferum
PSO210G0580 Papaver somniferum
PSO210G1353 Papaver somniferum
PSO782G1788 Papaver somniferum
QL02p091134 Quercus lobata
QL09p019900 Quercus lobata
QL12p009333 Quercus lobata
RcHm_v2.0_Chr1g0374421 Rosa chinensis
RcHm_v2.0_Chr2g0086771 Rosa chinensis
RcHm_v2.0_Chr7g0205141 Rosa chinensis
Rhsim01G0052200 Rhododendron simsii
Rhsim07G0118100 Rhododendron simsii
Rhsim09G0191400 Rhododendron simsii
Sabra01G0095700 Salix brachista
Sabra01G0122100 Salix brachista
Sabra01G0122200 Salix brachista
Sabra03G0075800 Salix brachista
Sabra18G0097800 Salix brachista
SalBow1G4772 Salvia bowleyana
SalBow4G0257 Salvia bowleyana
SalBow6G4598 Salvia bowleyana
Sc07g0009100 Simmondsia chinensis
Sc18g0000070 Simmondsia chinensis
Sc25g0000070 Simmondsia chinensis
Sed0006247 Sechium edule
Sed0008653 Sechium edule
Sed0021433 Sechium edule
SEGI_00705 Sequoiadendron giganteum
SEGI_04493 Sequoiadendron giganteum
SEGI_21219 Sequoiadendron giganteum
SEGI_29457 Sequoiadendron giganteum
SEGI_34383 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30219 Striga asiatica
SGA_v2.0_scaffold199G41246 Striga asiatica
SGA_v2.0_scaffold2G01202 Striga asiatica
SGA_v2.0_scaffold45G17061 Striga asiatica
SGA_v2.0_scaffold543G52826 Striga asiatica
SGA_v2.0_scaffold69G23156 Striga asiatica
SHI03286 Sapria himalayana
SMO228G0013 Selaginella moellendorffii
SMO232G0100 Selaginella moellendorffii
SMO356G0579 Selaginella moellendorffii
Solyc03g093140.3 Solanum lycopersicum
Solyc04g056713.1 Solanum lycopersicum
Solyc06g034290.3 Solanum lycopersicum
Solyc06g060910.2 Solanum lycopersicum
Solyc07g025090.1 Solanum lycopersicum
Solyc12g010440.3 Solanum lycopersicum
Sopen03g023930 Solanum pennellii
Sopen06g010930 Solanum pennellii
Sopen06g021060 Solanum pennellii
Sopen12g005460 Solanum pennellii
Sp1g26450 Schrenkiella parvula
Sp1g26460 Schrenkiella parvula
Sp3g30460 Schrenkiella parvula
Sp5g14460 Schrenkiella parvula
Sp7g16610 Schrenkiella parvula
Sp7g23240 Schrenkiella parvula
TAR375G0080 Trochodendron aralioides
TAR625G0885 Trochodendron aralioides
TAR629G1071 Trochodendron aralioides
TAR636G1729 Trochodendron aralioides
TAR636G2147 Trochodendron aralioides
TAR636G3385 Trochodendron aralioides
THA.LOC104798357 Tarenaya hassleriana
THA.LOC104808381 Tarenaya hassleriana
THA.LOC104808939 Tarenaya hassleriana
THA.LOC104821412 Tarenaya hassleriana
THA.LOC104825063 Tarenaya hassleriana
Thecc.03G156000 Theobroma cacao
Thecc.03G243200 Theobroma cacao
Thecc.09G140200 Theobroma cacao
Thhalv10007400m.g Eutrema salsugineum
Thhalv10010285m.g Eutrema salsugineum
Thhalv10022662m.g Eutrema salsugineum
Thhalv10024874m.g Eutrema salsugineum
Thhalv10024964m.g Eutrema salsugineum
TPR.G20247 Trifolium pratense
TPR.G25766 Trifolium pratense
TPR.G31558 Trifolium pratense
TWI23G0588 Tripterygium wilfordii
TWI39G0666 Tripterygium wilfordii
TWI60G0920 Tripterygium wilfordii
TWI63G1801 Tripterygium wilfordii
unitig_21.g20315 Utricularia gibba
unitig_21.g20316 Utricularia gibba
unitig_744.g24477 Utricularia gibba
unitig_747.g21809 Utricularia gibba
unitig_92.g28269 Utricularia gibba
vmacro00042 Vaccinium macrocarpon
vmacro09905 Vaccinium macrocarpon
vmacro21887 Vaccinium macrocarpon
VMungo0251G2163 Vigna mungo
VMungo1127G0431 Vigna mungo
VMungo1309G3061 Vigna mungo
Zm00001eb172590 Zea mays
Zm00001eb249190 Zea mays
Zm00001eb268090 Zea mays
Zm00001eb415960 Zea mays
Zm00001eb429440 Zea mays

User provided reference genes

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