Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23240 Brassica napus
A01p23440 Brassica napus
A09p10220 Brassica napus
A09p44620 Brassica napus
Aa31LG10G9060 Aethionema arabicum
Aa31LG1G14520 Aethionema arabicum
Aa31LG1G25920 Aethionema arabicum
Aa31LG4G10560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3029 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis
Actinidia11573 Actinidia chinensis
Actinidia17373 Actinidia chinensis
Actinidia17384 Actinidia chinensis
Actinidia22904 Actinidia chinensis
Actinidia22905 Actinidia chinensis
Actinidia22910 Actinidia chinensis
Actinidia26547 Actinidia chinensis
Actinidia26548 Actinidia chinensis
Actinidia29090 Actinidia chinensis
Actinidia35681 Actinidia chinensis
Ah.03g148390 Amaranthus hybridus
Ah.12g058760 Amaranthus hybridus
AL472U10010 Arabidopsis lyrata
AL5G31900 Arabidopsis lyrata
AL5G32290 Arabidopsis lyrata
AL8G45590 Arabidopsis lyrata
AL8G45600 Arabidopsis lyrata
Aqoxy4G02522 Aquilegia oxysepala
Aqoxy5G01035 Aquilegia oxysepala
Aqoxy6G01681 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CHH07W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D09L8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GDT1ET Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QS1PDB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RFZ0FJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XQV0C2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YHY8UM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z935MC Arachis hypogaea
AT3G51460 Arabidopsis thaliana
AT3G51830 Arabidopsis thaliana
AT5G66020 Arabidopsis thaliana
AT5G66030 Arabidopsis thaliana
ATR0661G081 Amborella trichopoda
ATR0661G538 Amborella trichopoda
ATR0661G546 Amborella trichopoda
ATR0681G258 Amborella trichopoda
ATR0686G064 Amborella trichopoda
Atru.chr3.956 Acer truncatum
Atru.chr3.968 Acer truncatum
Atru.chr3.982 Acer truncatum
Atru.chr8.2264 Acer truncatum
Atru.chr9.68 Acer truncatum
AUR62002843 Chenopodium quinoa
AUR62003379 Chenopodium quinoa
AUR62029449 Chenopodium quinoa
AUR62030485 Chenopodium quinoa
AUR62030806 Chenopodium quinoa
AUR62037308 Chenopodium quinoa
BcaB01g00512 Brassica carinata
BcaB04g20130 Brassica carinata
BcaC04g23105 Brassica carinata
BcaC09g50107 Brassica carinata
BcaNung00366 Brassica carinata
BcaNung00367 Brassica carinata
BcaNung00384 Brassica carinata
BcaNung05556 Brassica carinata
BolC1t02820H Brassica oleracea
BolC1t02839H Brassica oleracea
BolC8t50285H Brassica oleracea
BolC9t54101H Brassica oleracea
BraA01t02234Z Brassica rapa
BraA01t02251Z Brassica rapa
BraA09t36667Z Brassica rapa
BraA09t39922Z Brassica rapa
C01p28880 Brassica napus
C01p29070 Brassica napus
C08p26720 Brassica napus
C09p12110 Brassica napus
CAN.G1238.2 Capsicum annuum
CAN.G328.14 Capsicum annuum
CAN.G823.2 Capsicum annuum
CAN.G823.3 Capsicum annuum
CAN.G890.76 Capsicum annuum
CANSAT25G0770 Cannabis sativa
CANSAT25G0854 Cannabis sativa
CANSAT25G1453 Cannabis sativa
CANSAT35G1611 Cannabis sativa
CARHR161040 Cardamine hirsuta
CARHR161460 Cardamine hirsuta
CARHR281730 Cardamine hirsuta
CARHR281740 Cardamine hirsuta
Carub.0005s1784 Capsella rubella
Carub.0005s1818 Capsella rubella
Carub.0008s2848 Capsella rubella
Carub.0008s2849 Capsella rubella
Ca_24963_v3 Cicer arietinum L.
Ca_24972_v3 Cicer arietinum L.
Ca_26615_v3 Cicer arietinum L.
CBR_g32128 Chara braunii
Cc06_g01170 Coffea canephora
Cc06_g01180 Coffea canephora
Cc07_g11650 Coffea canephora
Cc07_g11730 Coffea canephora
Cc07_g11740 Coffea canephora
CDE04G1056 Ceratophyllum demersum
CDE04G1269 Ceratophyllum demersum
CDE06G1033 Ceratophyllum demersum
CDE06G1191 Ceratophyllum demersum
CDE06G1375 Ceratophyllum demersum
CDE07G1064 Ceratophyllum demersum
CDE07G1287 Ceratophyllum demersum
CDE09G1125 Ceratophyllum demersum
Cfa007070 Carpinus fangiana
Cfa017190 Carpinus fangiana
Cfa022870 Carpinus fangiana
Cfa026871 Carpinus fangiana
Ciclev10011419m.g Citrus clementina
Ciclev10024922m.g Citrus clementina
Ciclev10025215m.g Citrus clementina
CiPaw.07G004100 Carya illinoinensis
CiPaw.08G180900 Carya illinoinensis
CiPaw.10G157400 Carya illinoinensis
ClCG10G000340 Citrullus lanatus
ClCG10G022270 Citrullus lanatus
COL.COLO4_14511 Corchorus olitorius
COL.COLO4_22537 Corchorus olitorius
COL.COLO4_22544 Corchorus olitorius
Cpa.g.sc11.98 Carica papaya
Cpa.g.sc1414.4 Carica papaya
Cpa.g.sc55.186 Carica papaya
Cpa.g.sc6.341 Carica papaya
Cre09.g388750 Chlamydomonas reinhardtii
Cre09.g398808 Chlamydomonas reinhardtii
Cre18.g748497 Chlamydomonas reinhardtii
CsaV3_3G000380 Cucumis sativus L.
CsaV3_3G033610 Cucumis sativus L.
CsaV3_6G047860 Cucumis sativus L.
CSS0004867 Camellia sinensis var. sinensis
CSS0011414 Camellia sinensis var. sinensis
CSS0015744 Camellia sinensis var. sinensis
CSS0016549 Camellia sinensis var. sinensis
CSS0018418 Camellia sinensis var. sinensis
CSS0021516 Camellia sinensis var. sinensis
CSS0026297 Camellia sinensis var. sinensis
CSS0032440 Camellia sinensis var. sinensis
CSS0040912 Camellia sinensis var. sinensis
CSS0042720 Camellia sinensis var. sinensis
CSS0043948 Camellia sinensis var. sinensis
DCAR_010124 Daucus carota
DCAR_011583 Daucus carota
DCAR_014048 Daucus carota
DCAR_028860 Daucus carota
Dinv01496 Davidia involucrata
Dinv08526 Davidia involucrata
Dinv09290 Davidia involucrata
Dinv40173 Davidia involucrata
Dinv40179 Davidia involucrata
Duzib093G1742 Durio zibethinus
Duzib147G0638 Durio zibethinus
Duzib147G0778 Durio zibethinus
Duzib187G0329 Durio zibethinus
Duzib187G1854 Durio zibethinus
ECA238G1673 Erigeron canadensis
ECA238G2213 Erigeron canadensis
ECA238G3197 Erigeron canadensis
ECA240G0131 Erigeron canadensis
ECA246G1836 Erigeron canadensis
ECA247G3603 Erigeron canadensis
EL10Ac2g03231 Beta vulgaris
EL10Ac4g07687 Beta vulgaris
EL10Ac5g12545 Beta vulgaris
EL10Ac6g15468 Beta vulgaris
Eucgr.I02229 Eucalyptus grandis
Eucgr.J02528 Eucalyptus grandis
Eucgr.K02976 Eucalyptus grandis
FAN02G1368 Fragaria x ananassa
FAN05G1766 Fragaria x ananassa
FAN09G1852 Fragaria x ananassa
FAN14G0125 Fragaria x ananassa
FAN14G3930 Fragaria x ananassa
FAN19G0245 Fragaria x ananassa
FAN19G1061 Fragaria x ananassa
FAN23G1852 Fragaria x ananassa
FAN23G2867 Fragaria x ananassa
FAN26G0498 Fragaria x ananassa
FAN28G1835 Fragaria x ananassa
FAN28G2189 Fragaria x ananassa
FvH4_1g10490 Fragaria vesca
FvH4_1g10521 Fragaria vesca
FvH4_6g11241 Fragaria vesca
FvH4_6g11250 Fragaria vesca
Glyma.01G159400 Glycine max
Glyma.01G159900 Glycine max
Glyma.04G121500 Glycine max
Glyma.07G151700 Glycine max
Glyma.09G198950 Glycine max
Glyma.11G084200 Glycine max
Glyma.11G085100 Glycine max
Glyma.18G186501 Glycine max
Gohir.A02G177400 Gossypium hirsutum
Gohir.A04G092200 Gossypium hirsutum
Gohir.A10G099100 Gossypium hirsutum
Gohir.A10G099200 Gossypium hirsutum
Gohir.D03G002500 Gossypium hirsutum
Gohir.D04G131400 Gossypium hirsutum
Gohir.D10G088900 Gossypium hirsutum
Gohir.D10G089000 Gossypium hirsutum
Gorai.003G002700 Gossypium raimondii
Gorai.011G097800 Gossypium raimondii
Gorai.011G097900 Gossypium raimondii
Gorai.012G115300 Gossypium raimondii
GSVIVG01003839001 Vitis vinifera
GSVIVG01011177001 Vitis vinifera
GSVIVG01026652001 Vitis vinifera
HanXRQChr10g0294041 Helianthus annuus
HanXRQChr10g0294051 Helianthus annuus
HanXRQChr14g0442391 Helianthus annuus
HanXRQChr15g0489761 Helianthus annuus
HanXRQChr16g0531841 Helianthus annuus
Haze_03668 Corylus avellana
Haze_03675 Corylus avellana
Haze_21021 Corylus avellana
Haze_26467 Corylus avellana
Hma1.2p1_0085F.1_g044840 Hydrangea macrophylla
Hma1.2p1_0300F.1_g118110 Hydrangea macrophylla
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla
HPP92_003502 Vanilla planifolia
HPP92_003508 Vanilla planifolia
HPP92_012044 Vanilla planifolia
Hund03606 Selenicereus undatus
Hund03607 Selenicereus undatus
Hund03615 Selenicereus undatus
Hund14284 Selenicereus undatus
Hund19704 Selenicereus undatus
Lalb_Chr01g0023001 Lupinus albus
Lalb_Chr01g0023011 Lupinus albus
Lalb_Chr03g0043191 Lupinus albus
Lalb_Chr05g0211871 Lupinus albus
Lalb_Chr05g0211921 Lupinus albus
Lalb_Chr09g0334321 Lupinus albus
Lalb_Chr09g0334331 Lupinus albus
Lalb_Chr09g0334341 Lupinus albus
Lalb_Chr16g0377231 Lupinus albus
Lj1g0006734 Lotus japonicus
Lj2A497G57 Lonicera japonica
Lj2C73G2 Lonicera japonica
Lj2g0004784 Lotus japonicus
Lj2g0005015 Lotus japonicus
Lj4A232G45 Lonicera japonica
Lj4A234G53 Lonicera japonica
Lsat_1_v5_gn_2_73481 Lactuca sativa
Lsat_1_v5_gn_2_74420 Lactuca sativa
Lsat_1_v5_gn_3_68101 Lactuca sativa
Lsat_1_v5_gn_7_4660 Lactuca sativa
Lsat_1_v5_gn_8_112321 Lactuca sativa
Lsat_1_v5_gn_9_35180 Lactuca sativa
Manes.01G153700 Manihot esculenta
Manes.01G154500 Manihot esculenta
Manes.02G112700 Manihot esculenta
Manes.02G113400 Manihot esculenta
Manes.08G093500 Manihot esculenta
Manes.17G003900 Manihot esculenta
Mapoly0029s0078 Marchantia polymorpha
Mapoly0179s0009 Marchantia polymorpha
MBI12_g08777_MAGBIO Magnolia biondii
MBI12_g36337_MAGBIO Magnolia biondii
MCO01G668 Micromonas commoda
MD00G1079200 Malus domestica
MD00G1079400 Malus domestica
MD00G1079500 Malus domestica
MD02G1118500 Malus domestica
MD02G1119300 Malus domestica
MD04G1157300 Malus domestica
MD04G1159300 Malus domestica
MD12G1169200 Malus domestica
MD12G1169300 Malus domestica
MD12G1169400 Malus domestica
MD12G1169500 Malus domestica
MD12G1170500 Malus domestica
MD12G1171000 Malus domestica
MD12G1171100 Malus domestica
MD12G1171200 Malus domestica
MD12G1171300 Malus domestica
MD15G1232800 Malus domestica
MD15G1233300 Malus domestica
Medtr5g023770 Medicago truncatula
Medtr5g023960 Medicago truncatula
Medtr7g068890 Medicago truncatula
MELO3C007975.2 Cucumis melo
MELO3C009151.2 Cucumis melo
MELO3C013733.2 Cucumis melo
Migut.H02204 Erythranthe guttata
Migut.J00145 Erythranthe guttata
Migut.L00728 Erythranthe guttata
Migut.L00734 Erythranthe guttata
Migut.L00811 Erythranthe guttata
Migut.L00927 Erythranthe guttata
MSTRG.15594 Avicennia marina
MSTRG.3624 Avicennia marina
Nitab4.5_0000119g0060 Nicotiana tabacum
Nitab4.5_0000467g0020 Nicotiana tabacum
Nitab4.5_0000702g0060 Nicotiana tabacum
Nitab4.5_0000702g0150 Nicotiana tabacum
Nitab4.5_0002850g0090 Nicotiana tabacum
Nitab4.5_0002967g0060 Nicotiana tabacum
Nitab4.5_0006960g0020 Nicotiana tabacum
Nitab4.5_0014803g0010 Nicotiana tabacum
Nn1g09409 Nelumbo nucifera
Nn2g10875 Nelumbo nucifera
Nn5g30956 Nelumbo nucifera
Nn5g30965 Nelumbo nucifera
Oeu012448.1 Olea europaea
Oeu020654.1 Olea europaea
Oeu032010.1 Olea europaea
Oeu038762.1 Olea europaea
Os02g0554300 Oryza sativa ssp. japonica
Os03g0290500 Oryza sativa ssp. japonica
Os07g0472500 Oryza sativa ssp. japonica
Os11g0309000 Oryza sativa ssp. japonica
Peaxi162Scf00014g00217 Petunia axillaris
Peaxi162Scf00580g00310 Petunia axillaris
Peaxi162Scf01051g00136 Petunia axillaris
Peaxi162Scf01446g00025 Petunia axillaris
PGR083G0487 Punica granatum
PGR119G2034 Punica granatum
PGSC0003DMG400001569 Solanum tuberosum
PGSC0003DMG402004033 Solanum tuberosum
Phvul.002G114800 Phaseolus vulgaris
Phvul.002G115600 Phaseolus vulgaris
Phvul.003G269400 Phaseolus vulgaris
Phvul.008G097750 Phaseolus vulgaris
Phvul.008G097800 Phaseolus vulgaris
Potri.005G099800 Populus trichocarpa
Potri.005G100500 Populus trichocarpa
Potri.016G118300 Populus trichocarpa
Pp3c20_18210 Physcomitrium patens
Pp3c23_9770 Physcomitrium patens
Pp3c3_31010 Physcomitrium patens
Pp3c4_950 Physcomitrium patens
Pp3c8_5490 Physcomitrium patens
Pp3c8_7650 Physcomitrium patens
PRCOL_00003065 Prasinoderma coloniale
Prupe.6G279500 Prunus persica
Prupe.7G179600 Prunus persica
Prupe.7G181200 Prunus persica
Psat2g149280 Pisum sativum
Psat2g150480 Pisum sativum
Psat2g150520 Pisum sativum
Psat3g128920 Pisum sativum
PSO170G3735 Papaver somniferum
PSO210G1702 Papaver somniferum
PSO339G0465 Papaver somniferum
PSO384G0477 Papaver somniferum
PSO541G0001 Papaver somniferum
PSO675G7328 Papaver somniferum
QL06p052741 Quercus lobata
QL06p052840 Quercus lobata
QL06p053730 Quercus lobata
QL06p053793 Quercus lobata
QL06p053829 Quercus lobata
QL07p035143 Quercus lobata
QL07p035146 Quercus lobata
RcHm_v2.0_Chr1g0352571 Rosa chinensis
RcHm_v2.0_Chr2g0097371 Rosa chinensis
RcHm_v2.0_Chr2g0097451 Rosa chinensis
RcHm_v2.0_Chr2g0097461 Rosa chinensis
RcHm_v2.0_Chr2g0097561 Rosa chinensis
RcHm_v2.0_Chr2g0097571 Rosa chinensis
RcHm_v2.0_Chr2g0097581 Rosa chinensis
RcHm_v2.0_Chr3g0462761 Rosa chinensis
RcHm_v2.0_Chr3g0462771 Rosa chinensis
RcHm_v2.0_Chr6g0253501 Rosa chinensis
Rhsim05G0217100 Rhododendron simsii
Rhsim08G0027700 Rhododendron simsii
Rhsim10G0198000 Rhododendron simsii
Sabra05G0082500 Salix brachista
Sabra05G0083100 Salix brachista
Sabra16G0114300 Salix brachista
SalBow3G4186 Salvia bowleyana
SalBow5G3849 Salvia bowleyana
SalBow5G4887 Salvia bowleyana
SalBow5G5069 Salvia bowleyana
Sc07g0001350 Simmondsia chinensis
Sc16g0001690 Simmondsia chinensis
Sc22g0002530 Simmondsia chinensis
Sed0003910 Sechium edule
Sed0018868 Sechium edule
Sed0023593 Sechium edule
Sed0027614 Sechium edule
SEGI_12448 Sequoiadendron giganteum
SEGI_19241 Sequoiadendron giganteum
SEGI_20121 Sequoiadendron giganteum
SEGI_24461 Sequoiadendron giganteum
SGA_v2.0_scaffold12G05990 Striga asiatica
SGA_v2.0_scaffold229G43297 Striga asiatica
SGA_v2.0_scaffold2G00957 Striga asiatica
SGA_v2.0_scaffold74G24696 Striga asiatica
SGA_v2.0_scaffold85G26724 Striga asiatica
SMO146G0015 Selaginella moellendorffii
SMO169G0043 Selaginella moellendorffii
SMO199G0114 Selaginella moellendorffii
SMO202G0015 Selaginella moellendorffii
SMO271G0030 Selaginella moellendorffii
SMO361G0657 Selaginella moellendorffii
Solyc02g038819.1 Solanum lycopersicum
Solyc02g082630.2 Solanum lycopersicum
Solyc02g082750.4 Solanum lycopersicum
Solyc02g082770.3 Solanum lycopersicum
Solyc02g082840.3 Solanum lycopersicum
Solyc10g076580.1 Solanum lycopersicum
Solyc10g076590.3 Solanum lycopersicum
Sopen01g044160 Solanum pennellii
Sopen02g012690 Solanum pennellii
Sopen02g027320 Solanum pennellii
Sopen02g027510 Solanum pennellii
Sopen02g027640 Solanum pennellii
Sopen10g028230 Solanum pennellii
Sp2g30660 Schrenkiella parvula
Sp2g30670 Schrenkiella parvula
Sp5g10440 Schrenkiella parvula
Sp5g10780 Schrenkiella parvula
TAR376G0462 Trochodendron aralioides
TAR381G1734 Trochodendron aralioides
TAR628G0471 Trochodendron aralioides
TAR628G0582 Trochodendron aralioides
TAR633G2261 Trochodendron aralioides
THA.LOC104805930 Tarenaya hassleriana
THA.LOC104819161 Tarenaya hassleriana
THA.LOC104821353 Tarenaya hassleriana
THA.LOC104826465 Tarenaya hassleriana
Thecc.01G006400 Theobroma cacao
Thecc.01G007100 Theobroma cacao
Thecc.05G013700 Theobroma cacao
Thhalv10003686m.g Eutrema salsugineum
Thhalv10010223m.g Eutrema salsugineum
Thhalv10010245m.g Eutrema salsugineum
TPR.G25095 Trifolium pratense
TPR.G8373 Trifolium pratense
TPR.G8380 Trifolium pratense
TPR.G8424 Trifolium pratense
TWI09G1271 Tripterygium wilfordii
TWI73G0978 Tripterygium wilfordii
TWI74G0687 Tripterygium wilfordii
unitig_46.g18716 Utricularia gibba
unitig_748.g7548 Utricularia gibba
unitig_8.g4457 Utricularia gibba
unitig_88.g27773 Utricularia gibba
vmacro18458 Vaccinium macrocarpon
vmacro20291 Vaccinium macrocarpon
vmacro20292 Vaccinium macrocarpon
vmacro20524 Vaccinium macrocarpon
VMungo0251G0854 Vigna mungo
VMungo0251G1376 Vigna mungo
VMungo0251G1469 Vigna mungo
VMungo0540G0418 Vigna mungo
VMungo1215G1031 Vigna mungo
VMungo1215G1069 Vigna mungo
VMungo1309G1425 Vigna mungo
VMungo1383G1365 Vigna mungo
Zm00001eb104860 Zea mays
Zm00001eb181990 Zea mays
Zm00001eb243810 Zea mays
Zm00001eb397020 Zea mays

User provided reference genes

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