Gene: AT3G51460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G51460
  • Transcript Identifier AT3G51460.1
  • Gene Type Coding gene
  • Location Chr3 : 19093007-19097142 : positive

Gene Family Information

  • ID HOM05D001343
  • #Genes/#Species 469/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G51460.1
  • symbol RHD4
  • full_name ROOT HAIR DEFECTIVE4
  • uniprot Q9C5G5

Descriptions

  • Description Phosphoinositide phosphatase family protein
  • Computational description ROOT HAIR DEFECTIVE4 (RHD4); FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity, phosphatidylinositol-4-phosphate phosphatase activity; INVOLVED IN: root hair cell tip growth; LOCATED IN: plasma membrane of cell tip, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G66020.1); Has 1757 Blast hits to 1639 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 573; Fungi - 593; Plants - 286; Viruses - 0; Other Eukaryotes - 305 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046856
IBA
Gene Ontologyphosphatidylinositol dephosphorylation1
GO:0048768
IMP
Gene Ontologyroot hair cell tip growth2
GO:0009611
NAS
Gene Ontologyresponse to wounding3
GO:0009932
IMP
Gene Ontologycell tip growth

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016791
IEA
GOA Databasephosphatase activity
GO:0016791
IEA
InterProphosphatase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0043812
IDA
IBA
Gene Ontologyphosphatidylinositol-4-phosphate phosphatase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA, HDA
IBA
Gene Ontologyendoplasmic reticulum1 3 4
GO:0016020
IEA
GOA Databasemembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane6
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0030659
IEA
GOA Databasecytoplasmic vesicle membrane
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005829
HDA
Gene Ontologycytosol7
GO:0035619
IDA
Gene Ontologyroot hair tip8
GO:0090404
IDA
Gene Ontologypollen tube tip9
GO:0031520
IDA
Gene Ontologyplasma membrane of cell tip2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002013 SAC domain
Mapman id Description
27.5.2.7.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.SAC phosphoinositide phosphatase activities.SAC-group-II phosphoinositide 3-/4-phosphatase